RNA–Protein interactions for RNA: ENST00000541661.5

SCARB1-207, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5

Gene SCARB1, Length 476 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-207ENST00000541661 RBMY1CP0DJD4 496 aa9.5□□□□□ -0.89
SCARB1-207ENST00000541661 PSMB9P28065 219 aa9.5□□□□□ -0.89
SCARB1-207ENST00000541661 RFX2P48378 723 aa9.5□□□□□ -0.89
SCARB1-207ENST00000541661 DEFB131AP59861 70 aa9.5□□□□□ -0.89
SCARB1-207ENST00000541661 MXD1Q05195 221 aa9.5□□□□□ -0.89
SCARB1-207ENST00000541661 RBMY1FQ15415 496 aaKnown RBP9.5□□□□□ -0.89
SCARB1-207ENST00000541661 TMEM41BQ5BJD5 291 aa9.5□□□□□ -0.89
SCARB1-207ENST00000541661 IDNKQ5T6J7 187 aa9.5□□□□□ -0.89
SCARB1-207ENST00000541661 TOMM20LQ6UXN7 152 aa9.5□□□□□ -0.89
SCARB1-207ENST00000541661 CMTM1Q8IZ96 169 aa9.5□□□□□ -0.89
SCARB1-207ENST00000541661 ST8SIA2Q92186 375 aa9.5□□□□□ -0.89
SCARB1-207ENST00000541661 MISP3Q96FF7 219 aa9.5□□□□□ -0.89
SCARB1-207ENST00000541661 ZNF2Q9BSG1 426 aaPredicted RBP9.5□□□□□ -0.89
SCARB1-207ENST00000541661 EHFQ9NZC4 300 aa9.5□□□□□ -0.89
SCARB1-207ENST00000541661 ANAPC10Q9UM13 185 aa9.5□□□□□ -0.89
SCARB1-207ENST00000541661 IGHV4-28A0A0C4DH34 117 aa9.49□□□□□ -0.89
SCARB1-207ENST00000541661 MEIS3P1A6NDR6 274 aa9.49□□□□□ -0.89
SCARB1-207ENST00000541661 ZNF705EA8MWA4 302 aaPredicted RBP9.49□□□□□ -0.89
SCARB1-207ENST00000541661 DNASE2O00115 360 aaPredicted RBP9.49□□□□□ -0.89
SCARB1-207ENST00000541661 GPR31O00270 319 aa9.49□□□□□ -0.89
SCARB1-207ENST00000541661 ST8SIA3O43173 380 aa9.49□□□□□ -0.89
SCARB1-207ENST00000541661 XRCC3O43542 346 aa9.49□□□□□ -0.89
SCARB1-207ENST00000541661 GNG7O60262 68 aa9.49□□□□□ -0.89
SCARB1-207ENST00000541661 TMEM127O75204 238 aa9.49□□□□□ -0.89
SCARB1-207ENST00000541661 APOHP02749 345 aaPredicted RBP9.49□□□□□ -0.89
SCARB1-207ENST00000541661 EIF4EP06730 217 aaKnown RBP9.49□□□□□ -0.89
SCARB1-207ENST00000541661 MIFP14174 115 aa9.49□□□□□ -0.89
SCARB1-207ENST00000541661 NAT1P18440 290 aa9.49□□□□□ -0.89
SCARB1-207ENST00000541661 HLA-DMBP28068 263 aa9.49□□□□□ -0.89
SCARB1-207ENST00000541661 LEMD1Q68G75 181 aa9.49□□□□□ -0.89
SCARB1-207ENST00000541661 STHQ8IWL8 128 aa9.49□□□□□ -0.89
SCARB1-207ENST00000541661 FAM24BQ8N5W8 94 aa9.49□□□□□ -0.89
SCARB1-207ENST00000541661 TSPAN14Q8NG11 270 aa9.49□□□□□ -0.89
SCARB1-207ENST00000541661 FCGR1BQ92637 280 aa9.49□□□□□ -0.89
SCARB1-207ENST00000541661 Q9H521 79 aa9.49□□□□□ -0.89
SCARB1-207ENST00000541661 DNAH11Q96DT5 4516 aa9.48□□□□□ -0.89
SCARB1-207ENST00000541661 IGHV4-4A0A075B6R2 117 aa9.48□□□□□ -0.89
SCARB1-207ENST00000541661 TRAV10A0A0B4J240 114 aa9.48□□□□□ -0.89
SCARB1-207ENST00000541661 IGHV3-48P01763 117 aa9.48□□□□□ -0.89
SCARB1-207ENST00000541661 MED14OSP0DP75 135 aa9.48□□□□□ -0.89
SCARB1-207ENST00000541661 PRCDQ00LT1 54 aa9.48□□□□□ -0.89
SCARB1-207ENST00000541661 MORN3Q6PF18 240 aaPredicted RBP9.48□□□□□ -0.89
SCARB1-207ENST00000541661 TRPT1Q86TN4 253 aaKnown RBP9.48□□□□□ -0.89
SCARB1-207ENST00000541661 SEC22AQ96IW7 307 aa9.48□□□□□ -0.89
SCARB1-207ENST00000541661 RNF126Q9BV68 326 aa9.48□□□□□ -0.89
SCARB1-207ENST00000541661 FXYD6Q9H0Q3 95 aa9.48□□□□□ -0.89
SCARB1-207ENST00000541661 RNF167Q9H6Y7 350 aa9.48□□□□□ -0.89
SCARB1-207ENST00000541661 ZFAND3Q9H8U3 227 aa9.48□□□□□ -0.89
SCARB1-207ENST00000541661 IFT46Q9NQC8 304 aa9.48□□□□□ -0.89
SCARB1-207ENST00000541661 AGRNO00468 2067 aa9.47□□□□□ -0.89
SCARB1-207ENST00000541661 PMP2P02689 132 aa9.47□□□□□ -0.89
SCARB1-207ENST00000541661 SPP1P10451 314 aa9.47□□□□□ -0.89
SCARB1-207ENST00000541661 NPBWR1P48145 328 aa9.47□□□□□ -0.89
SCARB1-207ENST00000541661 HSPE1P61604 102 aaKnown RBP9.47□□□□□ -0.89
SCARB1-207ENST00000541661 ZNF600Q6ZNG1 722 aa9.47□□□□□ -0.89
SCARB1-207ENST00000541661 Q6ZTC4 211 aa9.47□□□□□ -0.89
SCARB1-207ENST00000541661 OR6F1Q8NGZ6 308 aa9.47□□□□□ -0.89
SCARB1-207ENST00000541661 OR4A16Q8NH70 328 aa9.47□□□□□ -0.89
SCARB1-207ENST00000541661 S100A16Q96FQ6 103 aaKnown RBP9.47□□□□□ -0.89
SCARB1-207ENST00000541661 GRAMD2BQ96HH9 432 aa9.47□□□□□ -0.89
SCARB1-207ENST00000541661 TMEM231Q9H6L2 316 aa9.47□□□□□ -0.89
SCARB1-207ENST00000541661 PUS1Q9Y606 427 aaKnown RBP eCLIP9.47□□□□□ -0.89
SCARB1-207ENST00000541661 X6R8D5 127 aa9.47□□□□□ -0.89
SCARB1-207ENST00000541661 ELOA3CA0A087WX78 387 aaPredicted RBP9.46□□□□□ -0.9
SCARB1-207ENST00000541661 K7EQG2 157 aa9.46□□□□□ -0.9
SCARB1-207ENST00000541661 TMEM50AO95807 157 aa9.46□□□□□ -0.9
SCARB1-207ENST00000541661 IGKV1-39P01597 117 aa9.46□□□□□ -0.9
SCARB1-207ENST00000541661 IGKV1D-39P04432 117 aa9.46□□□□□ -0.9
SCARB1-207ENST00000541661 TAS2R46P59540 309 aa9.46□□□□□ -0.9
SCARB1-207ENST00000541661 RPL11P62913 178 aaKnown RBP9.46□□□□□ -0.9
SCARB1-207ENST00000541661 ERHP84090 104 aaKnown RBP9.46□□□□□ -0.9
SCARB1-207ENST00000541661 PVRIGQ6DKI7 326 aa9.46□□□□□ -0.9
SCARB1-207ENST00000541661 LPCAT3Q6P1A2 487 aa9.46□□□□□ -0.9
SCARB1-207ENST00000541661 H2BFWTQ7Z2G1 175 aa9.46□□□□□ -0.9
SCARB1-207ENST00000541661 LYSMD2Q8IV50 215 aa9.46□□□□□ -0.9
SCARB1-207ENST00000541661 CSNK1G2-AS1Q8NCQ2 148 aa9.46□□□□□ -0.9
SCARB1-207ENST00000541661 OR5H2Q8NGV7 314 aa9.46□□□□□ -0.9
SCARB1-207ENST00000541661 PINX1Q96BK5 328 aaKnown RBP9.46□□□□□ -0.9
SCARB1-207ENST00000541661 IGHV3-66A0A0C4DH42 116 aa9.45□□□□□ -0.9
SCARB1-207ENST00000541661 A0A1B0GU03 582 aa9.45□□□□□ -0.9
SCARB1-207ENST00000541661 A0A1W2PS18 150 aa9.45□□□□□ -0.9
SCARB1-207ENST00000541661 A6NHS1 94 aa9.45□□□□□ -0.9
SCARB1-207ENST00000541661 INS-IGF2F8WCM5 200 aa9.45□□□□□ -0.9
SCARB1-207ENST00000541661 AMBPP02760 352 aa9.45□□□□□ -0.9
SCARB1-207ENST00000541661 NPPCP23582 126 aa9.45□□□□□ -0.9
SCARB1-207ENST00000541661 CENPSQ8N2Z9 138 aa9.45□□□□□ -0.9
SCARB1-207ENST00000541661 RABAC1Q9UI14 185 aa9.45□□□□□ -0.9
SCARB1-207ENST00000541661 LOC100506127A0A0U1RQW1 187 aa9.44□□□□□ -0.9
SCARB1-207ENST00000541661 RTL8CO15255 209 aa9.44□□□□□ -0.9
SCARB1-207ENST00000541661 C4BPBP20851 252 aa9.44□□□□□ -0.9
SCARB1-207ENST00000541661 CRYBB3P26998 211 aa9.44□□□□□ -0.9
SCARB1-207ENST00000541661 S100GP29377 79 aa9.44□□□□□ -0.9
SCARB1-207ENST00000541661 PHLDA2Q53GA4 152 aa9.44□□□□□ -0.9
SCARB1-207ENST00000541661 TBC1D26Q86UD7 250 aa9.44□□□□□ -0.9
SCARB1-207ENST00000541661 POM121L12Q8N7R1 296 aa9.44□□□□□ -0.9
SCARB1-207ENST00000541661 YTHDF1Q9BYJ9 559 aaKnown RBP9.44□□□□□ -0.9
SCARB1-207ENST00000541661 TBC1D24Q9ULP9 559 aa9.44□□□□□ -0.9
SCARB1-207ENST00000541661 MUC4Q99102 2169 aa9.44□□□□□ -0.9
SCARB1-207ENST00000541661 ABCA13Q86UQ4 5058 aa9.43□□□□□ -0.9
SCARB1-207ENST00000541661 PRSS29PA6NIE9 313 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms