RNA–Protein interactions for RNA: ENST00000540819.1

PRKDC-209, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 537 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-209ENST00000540819 KLF3P57682 345 aaPredicted RBP3.53□□□□□ -1.84
PRKDC-209ENST00000540819 RRAS2P62070 204 aaPredicted RBP3.53□□□□□ -1.84
PRKDC-209ENST00000540819 HIST1H4AP62805 103 aaKnown RBP3.53□□□□□ -1.84
PRKDC-209ENST00000540819 HIST1H1AQ02539 215 aaPredicted RBP3.53□□□□□ -1.84
PRKDC-209ENST00000540819 SLC38A11Q08AI6 406 aa3.53□□□□□ -1.84
PRKDC-209ENST00000540819 DEFB116Q30KQ4 102 aa3.53□□□□□ -1.84
PRKDC-209ENST00000540819 Q5W150 140 aa3.53□□□□□ -1.84
PRKDC-209ENST00000540819 KRTAP5-4Q6L8H1 288 aa3.53□□□□□ -1.84
PRKDC-209ENST00000540819 C16orf47Q6ZP98 133 aaPredicted RBP3.53□□□□□ -1.84
PRKDC-209ENST00000540819 Q6ZR03 302 aa3.53□□□□□ -1.84
PRKDC-209ENST00000540819 ADM2Q7Z4H4 148 aa3.53□□□□□ -1.84
PRKDC-209ENST00000540819 SPATA12Q7Z6I5 190 aa3.53□□□□□ -1.84
PRKDC-209ENST00000540819 KRTAP7-1Q8IUC3 87 aa3.53□□□□□ -1.84
PRKDC-209ENST00000540819 C3orf22Q8N5N4 141 aa3.53□□□□□ -1.84
PRKDC-209ENST00000540819 TSTD1Q8NFU3 115 aa3.53□□□□□ -1.84
PRKDC-209ENST00000540819 RBPMSQ93062 196 aaKnown RBP3.53□□□□□ -1.84
PRKDC-209ENST00000540819 C12orf57Q99622 126 aa3.53□□□□□ -1.84
PRKDC-209ENST00000540819 UPK3BQ9BT76 320 aa3.53□□□□□ -1.84
PRKDC-209ENST00000540819 LINC00574Q9H8X3 128 aa3.53□□□□□ -1.84
PRKDC-209ENST00000540819 ZNF835Q9Y2P0 537 aa3.53□□□□□ -1.84
PRKDC-209ENST00000540819 NUP210LQ5VU65 1888 aa3.53□□□□□ -1.84
PRKDC-209ENST00000540819 SIPA1L1O43166 1804 aa3.53□□□□□ -1.84
PRKDC-209ENST00000540819 PTPRGP23470 1445 aa3.53□□□□□ -1.85
PRKDC-209ENST00000540819 CCNB3Q8WWL7 1395 aa3.52□□□□□ -1.85
PRKDC-209ENST00000540819 MEIKINA0A087WXM9 373 aa3.52□□□□□ -1.85
PRKDC-209ENST00000540819 DHRS12A0PJE2 317 aa3.52□□□□□ -1.85
PRKDC-209ENST00000540819 BUB1B-PAK6H3BSN5 160 aa3.52□□□□□ -1.85
PRKDC-209ENST00000540819 M0R2Z0 102 aa3.52□□□□□ -1.85
PRKDC-209ENST00000540819 PHOX2AO14813 284 aa3.52□□□□□ -1.85
PRKDC-209ENST00000540819 LECT2O14960 151 aa3.52□□□□□ -1.85
PRKDC-209ENST00000540819 DPM2O94777 84 aa3.52□□□□□ -1.85
PRKDC-209ENST00000540819 C1QAP02745 245 aa3.52□□□□□ -1.85
PRKDC-209ENST00000540819 SELENOWP63302 87 aa3.52□□□□□ -1.85
PRKDC-209ENST00000540819 EMX2Q04743 252 aa3.52□□□□□ -1.85
PRKDC-209ENST00000540819 DNLZQ5SXM8 178 aa3.52□□□□□ -1.85
PRKDC-209ENST00000540819 C1orf140Q5VVS0 124 aa3.52□□□□□ -1.85
PRKDC-209ENST00000540819 RASL11AQ6T310 242 aa3.52□□□□□ -1.85
PRKDC-209ENST00000540819 MAPK1IP1LQ8NDC0 245 aa3.52□□□□□ -1.85
PRKDC-209ENST00000540819 LXNQ9BS40 222 aa3.52□□□□□ -1.85
PRKDC-209ENST00000540819 SMIM3Q9BZL3 60 aa3.52□□□□□ -1.85
PRKDC-209ENST00000540819 OR8D2Q9GZM6 311 aa3.52□□□□□ -1.85
PRKDC-209ENST00000540819 TMEM133Q9H2Q1 129 aa3.52□□□□□ -1.85
PRKDC-209ENST00000540819 ERG28Q9UKR5 140 aa3.52□□□□□ -1.85
PRKDC-209ENST00000540819 ZNF318Q5VUA4 2279 aa3.52□□□□□ -1.85
PRKDC-209ENST00000540819 RTL9Q8NET4 1388 aa3.51□□□□□ -1.85
PRKDC-209ENST00000540819 FAM135AQ9P2D6 1515 aa3.51□□□□□ -1.85
PRKDC-209ENST00000540819 IRGMA1A4Y4 181 aa3.51□□□□□ -1.85
PRKDC-209ENST00000540819 ZNF860A6NHJ4 632 aa3.51□□□□□ -1.85
PRKDC-209ENST00000540819 H3BMM0 161 aa3.51□□□□□ -1.85
PRKDC-209ENST00000540819 GABARAPH6UMI1 98 aa3.51□□□□□ -1.85
PRKDC-209ENST00000540819 C19orf84I3L1E1 186 aa3.51□□□□□ -1.85
PRKDC-209ENST00000540819 K7ERU9 68 aa3.51□□□□□ -1.85
PRKDC-209ENST00000540819 M0R378 163 aa3.51□□□□□ -1.85
PRKDC-209ENST00000540819 GGCTO75223 188 aaKnown RBP3.51□□□□□ -1.85
PRKDC-209ENST00000540819 CCL3P10147 92 aa3.51□□□□□ -1.85
PRKDC-209ENST00000540819 SLC25A16P16260 332 aa3.51□□□□□ -1.85
PRKDC-209ENST00000540819 VEGFCP49767 419 aa3.51□□□□□ -1.85
PRKDC-209ENST00000540819 INSL3P51460 131 aa3.51□□□□□ -1.85
PRKDC-209ENST00000540819 RBM11P57052 281 aaKnown RBP3.51□□□□□ -1.85
PRKDC-209ENST00000540819 YPEL3P61236 119 aaPredicted RBP3.51□□□□□ -1.85
PRKDC-209ENST00000540819 RPL18Q07020 188 aaKnown RBP3.51□□□□□ -1.85
PRKDC-209ENST00000540819 SPANXN3Q5MJ09 141 aa3.51□□□□□ -1.85
PRKDC-209ENST00000540819 BCL2L15Q5TBC7 163 aa3.51□□□□□ -1.85
PRKDC-209ENST00000540819 RPP25LQ8N5L8 163 aaKnown RBP3.51□□□□□ -1.85
PRKDC-209ENST00000540819 OR52R1Q8NGF1 315 aa3.51□□□□□ -1.85
PRKDC-209ENST00000540819 UBE2WQ96B02 151 aa3.51□□□□□ -1.85
PRKDC-209ENST00000540819 RNF5Q99942 180 aa3.51□□□□□ -1.85
PRKDC-209ENST00000540819 TCEAL7Q9BRU2 100 aa3.51□□□□□ -1.85
PRKDC-209ENST00000540819 MND1Q9BWT6 205 aa3.51□□□□□ -1.85
PRKDC-209ENST00000540819 SLC39A9Q9NUM3 307 aa3.51□□□□□ -1.85
PRKDC-209ENST00000540819 MRC2Q9UBG0 1479 aa3.51□□□□□ -1.85
PRKDC-209ENST00000540819 DOCK9Q9BZ29 2069 aa3.51□□□□□ -1.85
PRKDC-209ENST00000540819 ECM29Q5VYK3 1845 aa3.51□□□□□ -1.85
PRKDC-209ENST00000540819 A2MP01023 1474 aa3.5□□□□□ -1.85
PRKDC-209ENST00000540819 COL5A2P05997 1499 aaPredicted RBP3.5□□□□□ -1.85
PRKDC-209ENST00000540819 A0A1B0GW64 132 aa3.5□□□□□ -1.85
PRKDC-209ENST00000540819 GRIFINA4D1Z8 144 aa3.5□□□□□ -1.85
PRKDC-209ENST00000540819 C17orf51A8MQB3 221 aa3.5□□□□□ -1.85
PRKDC-209ENST00000540819 FABP5P3A8MUU1 101 aa3.5□□□□□ -1.85
PRKDC-209ENST00000540819 J3QQQ9 107 aa3.5□□□□□ -1.85
PRKDC-209ENST00000540819 LEPROTO15243 131 aa3.5□□□□□ -1.85
PRKDC-209ENST00000540819 CRHBPP24387 322 aa3.5□□□□□ -1.85
PRKDC-209ENST00000540819 PSMB8P28062 276 aa3.5□□□□□ -1.85
PRKDC-209ENST00000540819 FXYD7P58549 80 aa3.5□□□□□ -1.85
PRKDC-209ENST00000540819 NCS1P62166 190 aa3.5□□□□□ -1.85
PRKDC-209ENST00000540819 AKR1C1Q04828 323 aa3.5□□□□□ -1.85
PRKDC-209ENST00000540819 TRAPPC6BQ86SZ2 158 aa3.5□□□□□ -1.85
PRKDC-209ENST00000540819 RPRMLQ8N4K4 120 aa3.5□□□□□ -1.85
PRKDC-209ENST00000540819 CYB561D1Q8N8Q1 229 aa3.5□□□□□ -1.85
PRKDC-209ENST00000540819 OR4C6Q8NH72 309 aa3.5□□□□□ -1.85
PRKDC-209ENST00000540819 PPTC7Q8NI37 304 aa3.5□□□□□ -1.85
PRKDC-209ENST00000540819 DCANP1Q8TF63 244 aa3.5□□□□□ -1.85
PRKDC-209ENST00000540819 ELSPBP1Q96BH3 223 aa3.5□□□□□ -1.85
PRKDC-209ENST00000540819 MGLLQ99685 303 aa3.5□□□□□ -1.85
PRKDC-209ENST00000540819 PRADC1Q9BSG0 188 aa3.5□□□□□ -1.85
PRKDC-209ENST00000540819 KRTAP4-4Q9BYR3 166 aa3.5□□□□□ -1.85
PRKDC-209ENST00000540819 OTORQ9NRC9 128 aa3.5□□□□□ -1.85
PRKDC-209ENST00000540819 OR5V1Q9UGF6 321 aa3.5□□□□□ -1.85
PRKDC-209ENST00000540819 ICOSQ9Y6W8 199 aa3.5□□□□□ -1.85
PRKDC-209ENST00000540819 EML6Q6ZMW3 1958 aa3.5□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms