RNA–Protein interactions for RNA: ENST00000540781.5

RAP1B-222, Transcript of RAP1B, member of RAS oncogene family, human

TSL 4

Gene RAP1B, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAP1B-222	ENST00000540781	C8orf88	P0DMB2	117 aa		15	□□□□□ -0.01
RAP1B-222	ENST00000540781	SNCA	P37840	140 aa		15	□□□□□ -0.01
RAP1B-222	ENST00000540781	MFAP4	P55083	255 aa		15	□□□□□ -0.01
RAP1B-222	ENST00000540781	BTNL8	Q6UX41	500 aa		15	□□□□□ -0.01
RAP1B-222	ENST00000540781	TMEM61	Q8N0U2	210 aa		15	□□□□□ -0.01
RAP1B-222	ENST00000540781	MCUB	Q9NWR8	336 aa		15	□□□□□ -0.01
RAP1B-222	ENST00000540781	GAR1	Q9NY12	217 aa	Known RBP	15	□□□□□ -0.01
RAP1B-222	ENST00000540781	CRYM-AS1	A6NIL9	109 aa		14.99	□□□□□ -0.01
RAP1B-222	ENST00000540781	NDUFA4	O00483	81 aa		14.99	□□□□□ -0.01
RAP1B-222	ENST00000540781	MT-CO2	P00403	227 aa		14.99	□□□□□ -0.01
RAP1B-222	ENST00000540781	CD7	P09564	240 aa		14.99	□□□□□ -0.01
RAP1B-222	ENST00000540781	S100A5	P33763	92 aa		14.99	□□□□□ -0.01
RAP1B-222	ENST00000540781	ADM	P35318	185 aa		14.99	□□□□□ -0.01
RAP1B-222	ENST00000540781	ETV6	P41212	452 aa		14.99	□□□□□ -0.01
RAP1B-222	ENST00000540781	PYDC2	Q56P42	97 aa		14.99	□□□□□ -0.01
RAP1B-222	ENST00000540781	FAM219A	Q8IW50	185 aa		14.99	□□□□□ -0.01
RAP1B-222	ENST00000540781	SELENOH	Q8IZQ5	122 aa	Known RBP	14.99	□□□□□ -0.01
RAP1B-222	ENST00000540781	LHFPL5	Q8TAF8	219 aa		14.99	□□□□□ -0.01
RAP1B-222	ENST00000540781	RBPMS	Q93062	196 aa	Known RBP	14.99	□□□□□ -0.01
RAP1B-222	ENST00000540781	PINX1	Q96BK5	328 aa	Known RBP	14.99	□□□□□ -0.01
RAP1B-222	ENST00000540781	SCGB3A2	Q96PL1	93 aa		14.99	□□□□□ -0.01
RAP1B-222	ENST00000540781	RBM38	Q9H0Z9	239 aa	Known RBP	14.99	□□□□□ -0.01
RAP1B-222	ENST00000540781	INS-IGF2	F8WCM5	200 aa		14.98	□□□□□ -0.01
RAP1B-222	ENST00000540781	CTSG	P08311	255 aa		14.98	□□□□□ -0.01
RAP1B-222	ENST00000540781	HOXA1	P49639	335 aa	Predicted RBP	14.98	□□□□□ -0.01
RAP1B-222	ENST00000540781		Q6ZRM9	215 aa		14.98	□□□□□ -0.01
RAP1B-222	ENST00000540781	TXN2	Q99757	166 aa		14.98	□□□□□ -0.01
RAP1B-222	ENST00000540781	TM2D3	Q9BRN9	247 aa		14.98	□□□□□ -0.01
RAP1B-222	ENST00000540781	C20orf24	Q9BUV8	137 aa		14.98	□□□□□ -0.01
RAP1B-222	ENST00000540781	ENY2	Q9NPA8	101 aa		14.98	□□□□□ -0.01
RAP1B-222	ENST00000540781	NUPL2	O15504	423 aa	Known RBP	14.97	□□□□□ -0.01
RAP1B-222	ENST00000540781	IGHV3-48	P01763	117 aa		14.97	□□□□□ -0.01
RAP1B-222	ENST00000540781	FAU	P35544	74 aa	Known RBP	14.97	□□□□□ -0.01
RAP1B-222	ENST00000540781	TMEM268	Q5VZI3	342 aa		14.97	□□□□□ -0.01
RAP1B-222	ENST00000540781	DAZ1	Q9NQZ3	744 aa	Known RBP	14.97	□□□□□ -0.01
RAP1B-222	ENST00000540781	CTNNBIP1	Q9NSA3	81 aa	Predicted RBP	14.97	□□□□□ -0.01
RAP1B-222	ENST00000540781	KCNIP3	Q9Y2W7	256 aa		14.97	□□□□□ -0.01
RAP1B-222	ENST00000540781		V9GYH0	126 aa		14.97	□□□□□ -0.01
RAP1B-222	ENST00000540781	TRAV25	A0A0B4J276	109 aa		14.96	□□□□□ -0.01
RAP1B-222	ENST00000540781	ZNF701	M0R085	212 aa	Predicted RBP	14.96	□□□□□ -0.01
RAP1B-222	ENST00000540781	SCAF4	O95104	1147 aa	Known RBP	14.96	□□□□□ -0.01
RAP1B-222	ENST00000540781	FCGR2B	P31994	310 aa	Predicted RBP	14.96	□□□□□ -0.01
RAP1B-222	ENST00000540781	SUB1	P53999	127 aa	Known RBP eCLIP	14.96	□□□□□ -0.01
RAP1B-222	ENST00000540781	HAGH	Q16775	308 aa		14.96	□□□□□ -0.01
RAP1B-222	ENST00000540781	RBPMS2	Q6ZRY4	209 aa	Known RBP	14.96	□□□□□ -0.01
RAP1B-222	ENST00000540781	SLC16A13	Q7RTY0	426 aa		14.96	□□□□□ -0.01
RAP1B-222	ENST00000540781	DEFB125	Q8N687	156 aa		14.96	□□□□□ -0.01
RAP1B-222	ENST00000540781	TMEM230	Q96A57	120 aa		14.96	□□□□□ -0.01
RAP1B-222	ENST00000540781	GPR146	Q96CH1	333 aa		14.96	□□□□□ -0.01
RAP1B-222	ENST00000540781	HUWE1	Q7Z6Z7	4374 aa	Known RBP	14.96	□□□□□ -0.01
RAP1B-222	ENST00000540781	IGHV3OR16-8	A0A075B7F1	116 aa		14.95	□□□□□ -0.02
RAP1B-222	ENST00000540781	OR11H12	B2RN74	326 aa		14.95	□□□□□ -0.02
RAP1B-222	ENST00000540781		K7EMT4	169 aa		14.95	□□□□□ -0.02
RAP1B-222	ENST00000540781	RNASE2	P10153	161 aa	Known RBP	14.95	□□□□□ -0.02
RAP1B-222	ENST00000540781	AP3S2	P59780	193 aa		14.95	□□□□□ -0.02
RAP1B-222	ENST00000540781	SPCS3	P61009	180 aa		14.95	□□□□□ -0.02
RAP1B-222	ENST00000540781	REL	Q04864	619 aa	Predicted RBP	14.95	□□□□□ -0.02
RAP1B-222	ENST00000540781	KLF9	Q13886	244 aa	Predicted RBP	14.95	□□□□□ -0.02
RAP1B-222	ENST00000540781	TOMM5	Q8N4H5	51 aa		14.95	□□□□□ -0.02
RAP1B-222	ENST00000540781	OR52B4	Q8NGK2	314 aa		14.95	□□□□□ -0.02
RAP1B-222	ENST00000540781	TRIM63	Q969Q1	353 aa		14.95	□□□□□ -0.02
RAP1B-222	ENST00000540781	WFDC10A	Q9H1F0	79 aa		14.95	□□□□□ -0.02
RAP1B-222	ENST00000540781	TMEM56-RWDD3	S4R434	201 aa		14.95	□□□□□ -0.02
RAP1B-222	ENST00000540781	ZNF207	O43670	478 aa	Known RBP	14.94	□□□□□ -0.02
RAP1B-222	ENST00000540781	GNG7	O60262	68 aa		14.94	□□□□□ -0.02
RAP1B-222	ENST00000540781	AKR1C4	P17516	323 aa		14.94	□□□□□ -0.02
RAP1B-222	ENST00000540781	TMEM187	Q14656	261 aa		14.94	□□□□□ -0.02
RAP1B-222	ENST00000540781	ZNF79	Q15937	498 aa		14.94	□□□□□ -0.02
RAP1B-222	ENST00000540781	ANKRD55	Q3KP44	614 aa		14.94	□□□□□ -0.02
RAP1B-222	ENST00000540781	AARD	Q4LEZ3	155 aa		14.94	□□□□□ -0.02
RAP1B-222	ENST00000540781	CCDC190	Q86UF4	302 aa		14.94	□□□□□ -0.02
RAP1B-222	ENST00000540781	DUSP18	Q8NEJ0	188 aa		14.94	□□□□□ -0.02
RAP1B-222	ENST00000540781	GALNT14	Q96FL9	552 aa		14.94	□□□□□ -0.02
RAP1B-222	ENST00000540781	SRD5A3	Q9H8P0	318 aa		14.94	□□□□□ -0.02
RAP1B-222	ENST00000540781	CACNG5	Q9UF02	275 aa		14.94	□□□□□ -0.02
RAP1B-222	ENST00000540781	CORT	O00230	105 aa		14.93	□□□□□ -0.02
RAP1B-222	ENST00000540781	YIF1A	O95070	293 aa		14.93	□□□□□ -0.02
RAP1B-222	ENST00000540781	NPBWR1	P48145	328 aa		14.93	□□□□□ -0.02
RAP1B-222	ENST00000540781	PVRIG	Q6DKI7	326 aa		14.93	□□□□□ -0.02
RAP1B-222	ENST00000540781	LINC00322	Q6ZN03	302 aa	Predicted RBP	14.93	□□□□□ -0.02
RAP1B-222	ENST00000540781	OR52E5	Q8NH55	327 aa		14.93	□□□□□ -0.02
RAP1B-222	ENST00000540781	IL22RA2	Q969J5	263 aa		14.93	□□□□□ -0.02
RAP1B-222	ENST00000540781	SPATA25	Q9BR10	227 aa		14.93	□□□□□ -0.02
RAP1B-222	ENST00000540781	PRR13	Q9NZ81	148 aa		14.93	□□□□□ -0.02
RAP1B-222	ENST00000540781	C15orf62	A8K5M9	175 aa		14.92	□□□□□ -0.02
RAP1B-222	ENST00000540781	LAMTOR1	Q6IAA8	161 aa		14.92	□□□□□ -0.02
RAP1B-222	ENST00000540781	ZNF414	Q96IQ9	312 aa		14.92	□□□□□ -0.02
RAP1B-222	ENST00000540781	HEYL	Q9NQ87	328 aa	Predicted RBP	14.92	□□□□□ -0.02
RAP1B-222	ENST00000540781	SUPT4H1	P63272	117 aa	Known RBP	14.91	□□□□□ -0.02
RAP1B-222	ENST00000540781	SPANXN2	Q5MJ10	180 aa		14.91	□□□□□ -0.02
RAP1B-222	ENST00000540781	SMPX	Q9UHP9	88 aa		14.91	□□□□□ -0.02
RAP1B-222	ENST00000540781	RBMY1B	A6NDE4	496 aa	Known RBP	14.9	□□□□□ -0.02
RAP1B-222	ENST00000540781	RBMY1E	A6NEQ0	496 aa	Known RBP	14.9	□□□□□ -0.02
RAP1B-222	ENST00000540781	CEBPZOS	A8MTT3	80 aa		14.9	□□□□□ -0.02
RAP1B-222	ENST00000540781	RBMY1D	P0C7P1	496 aa	Known RBP	14.9	□□□□□ -0.02
RAP1B-222	ENST00000540781	SULT1A3	P0DMM9	295 aa		14.9	□□□□□ -0.02
RAP1B-222	ENST00000540781	SULT1A4	P0DMN0	295 aa		14.9	□□□□□ -0.02
RAP1B-222	ENST00000540781	ANXA3	P12429	323 aa		14.9	□□□□□ -0.02
RAP1B-222	ENST00000540781	HTR2B	P41595	481 aa		14.9	□□□□□ -0.02
RAP1B-222	ENST00000540781	BSX	Q3C1V8	233 aa		14.9	□□□□□ -0.02

Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms