RNA–Protein interactions for RNA: ENST00000540608.5

NPC1-202, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 2

Gene NPC1, Length 2,790 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-202ENST00000540608 AMY1AP04745 511 aa10.02□□□□□ -0.81
NPC1-202ENST00000540608 RNASE2P10153 161 aaKnown RBP10.02□□□□□ -0.81
NPC1-202ENST00000540608 MLANAQ16655 118 aa10.02□□□□□ -0.81
NPC1-202ENST00000540608 TIMM23BQ5SRD1 257 aa10.02□□□□□ -0.81
NPC1-202ENST00000540608 IBA57Q5T440 356 aaKnown RBP10.02□□□□□ -0.81
NPC1-202ENST00000540608 VHLLQ6RSH7 139 aa10.02□□□□□ -0.81
NPC1-202ENST00000540608 SLC25A48Q6ZT89 311 aaKnown RBP10.02□□□□□ -0.81
NPC1-202ENST00000540608 Q8N976 141 aa10.02□□□□□ -0.81
NPC1-202ENST00000540608 OR5B3Q8NH48 314 aa10.02□□□□□ -0.81
NPC1-202ENST00000540608 FAM103A1Q9BTL3 118 aaKnown RBP10.02□□□□□ -0.81
NPC1-202ENST00000540608 GCM1Q9NP62 436 aa10.02□□□□□ -0.81
NPC1-202ENST00000540608 BET1LQ9NYM9 111 aa10.02□□□□□ -0.81
NPC1-202ENST00000540608 DSCAML1Q8TD84 2053 aa10.01□□□□□ -0.81
NPC1-202ENST00000540608 A0A1W2PS18 150 aa10.01□□□□□ -0.81
NPC1-202ENST00000540608 TM4SF5O14894 197 aa10.01□□□□□ -0.81
NPC1-202ENST00000540608 MMP23AO75900 390 aa10.01□□□□□ -0.81
NPC1-202ENST00000540608 TMEM30BQ3MIR4 351 aa10.01□□□□□ -0.81
NPC1-202ENST00000540608 OR9G1Q8NH87 305 aa10.01□□□□□ -0.81
NPC1-202ENST00000540608 GAFA1Q96PS6 74 aa10.01□□□□□ -0.81
NPC1-202ENST00000540608 RNF2Q99496 336 aa10.01□□□□□ -0.81
NPC1-202ENST00000540608 TBL2Q9Y4P3 447 aaKnown RBP10.01□□□□□ -0.81
NPC1-202ENST00000540608 RNF114Q9Y508 228 aa10.01□□□□□ -0.81
NPC1-202ENST00000540608 DSCAMO60469 2012 aa10.01□□□□□ -0.81
NPC1-202ENST00000540608 MBD3L4A6NDZ8 208 aaPredicted RBP10.01□□□□□ -0.81
NPC1-202ENST00000540608 MBD3L3A6NE82 208 aaPredicted RBP10.01□□□□□ -0.81
NPC1-202ENST00000540608 MBD3L5A6NJ08 208 aaPredicted RBP10.01□□□□□ -0.81
NPC1-202ENST00000540608 HLA-DQA1P01909 254 aa10.01□□□□□ -0.81
NPC1-202ENST00000540608 CASP6P55212 293 aa10.01□□□□□ -0.81
NPC1-202ENST00000540608 KRTDAPP60985 99 aa10.01□□□□□ -0.81
NPC1-202ENST00000540608 CD69Q07108 199 aa10.01□□□□□ -0.81
NPC1-202ENST00000540608 KIAA1644Q3SXP7 199 aa10.01□□□□□ -0.81
NPC1-202ENST00000540608 MBD3L2Q8NHZ7 208 aaPredicted RBP10.01□□□□□ -0.81
NPC1-202ENST00000540608 KCNS1Q96KK3 526 aa10.01□□□□□ -0.81
NPC1-202ENST00000540608 MRPL32Q9BYC8 188 aaKnown RBP10.01□□□□□ -0.81
NPC1-202ENST00000540608 NRN1Q9NPD7 142 aa10.01□□□□□ -0.81
NPC1-202ENST00000540608 RPUSD1Q9UJJ7 312 aaKnown RBP10.01□□□□□ -0.81
NPC1-202ENST00000540608 DIRC3C9JPN6 131 aa10□□□□□ -0.81
NPC1-202ENST00000540608 ZNF253O75346 499 aa10□□□□□ -0.81
NPC1-202ENST00000540608 MGST1P10620 155 aaKnown RBP10□□□□□ -0.81
NPC1-202ENST00000540608 TCL1AP56279 114 aa10□□□□□ -0.81
NPC1-202ENST00000540608 SLC35B1P78383 322 aa10□□□□□ -0.81
NPC1-202ENST00000540608 TCF15Q12870 199 aa10□□□□□ -0.81
NPC1-202ENST00000540608 C3orf36Q3SXR2 165 aa10□□□□□ -0.81
NPC1-202ENST00000540608 OR4B1Q8NGF8 309 aa10□□□□□ -0.81
NPC1-202ENST00000540608 CACNG8Q8WXS5 425 aa10□□□□□ -0.81
NPC1-202ENST00000540608 TMEM68Q96MH6 324 aa10□□□□□ -0.81
NPC1-202ENST00000540608 CCL13Q99616 98 aa10□□□□□ -0.81
NPC1-202ENST00000540608 OTOGLQ3ZCN5 2332 aa10□□□□□ -0.81
NPC1-202ENST00000540608 IZUMO1RA6ND01 250 aa10□□□□□ -0.81
NPC1-202ENST00000540608 BMPR1BO00238 502 aa10□□□□□ -0.81
NPC1-202ENST00000540608 REG1AP05451 166 aa10□□□□□ -0.81
NPC1-202ENST00000540608 AMTP48728 403 aa10□□□□□ -0.81
NPC1-202ENST00000540608 DEFB108BQ8NET1 73 aa10□□□□□ -0.81
NPC1-202ENST00000540608 PRSS33Q8NF86 280 aa10□□□□□ -0.81
NPC1-202ENST00000540608 FAM167A-AS1Q96KT0 104 aa10□□□□□ -0.81
NPC1-202ENST00000540608 CDC42EP3Q9UKI2 254 aa10□□□□□ -0.81
NPC1-202ENST00000540608 CADP27708 2225 aa10□□□□□ -0.81
NPC1-202ENST00000540608 TTC28Q96AY4 2481 aa10□□□□□ -0.81
NPC1-202ENST00000540608 PSMB11A5LHX3 300 aa9.99□□□□□ -0.81
NPC1-202ENST00000540608 SAA1P0DJI8 122 aaPredicted RBP9.99□□□□□ -0.81
NPC1-202ENST00000540608 TNFAIP6P98066 277 aaPredicted RBP9.99□□□□□ -0.81
NPC1-202ENST00000540608 ZNF474Q6S9Z5 364 aaPredicted RBP9.99□□□□□ -0.81
NPC1-202ENST00000540608 ZNF788Q6ZQV5 615 aa9.99□□□□□ -0.81
NPC1-202ENST00000540608 RPRMLQ8N4K4 120 aa9.99□□□□□ -0.81
NPC1-202ENST00000540608 RCHY1Q96PM5 261 aa9.99□□□□□ -0.81
NPC1-202ENST00000540608 TMEM208Q9BTX3 173 aa9.99□□□□□ -0.81
NPC1-202ENST00000540608 SLC25A2Q9BXI2 301 aa9.99□□□□□ -0.81
NPC1-202ENST00000540608 COMMD5Q9GZQ3 224 aa9.99□□□□□ -0.81
NPC1-202ENST00000540608 DNAJC4Q9NNZ3 241 aa9.99□□□□□ -0.81
NPC1-202ENST00000540608 SERTAD4Q9NUC0 356 aa9.99□□□□□ -0.81
NPC1-202ENST00000540608 TANC2Q9HCD6 1990 aa9.99□□□□□ -0.81
NPC1-202ENST00000540608 SRIP30626 198 aa9.99□□□□□ -0.81
NPC1-202ENST00000540608 MRPL54Q6P161 138 aaKnown RBP9.99□□□□□ -0.81
NPC1-202ENST00000540608 OR10W1Q8NGF6 305 aa9.99□□□□□ -0.81
NPC1-202ENST00000540608 NDUFA4L2Q9NRX3 87 aa9.99□□□□□ -0.81
NPC1-202ENST00000540608 TRAV5A0A0B4J249 113 aa9.98□□□□□ -0.81
NPC1-202ENST00000540608 DLL1O00548 723 aa9.98□□□□□ -0.81
NPC1-202ENST00000540608 DLEU1O43261 78 aa9.98□□□□□ -0.81
NPC1-202ENST00000540608 IGHV1-46P01743 117 aa9.98□□□□□ -0.81
NPC1-202ENST00000540608 APCSP02743 223 aa9.98□□□□□ -0.81
NPC1-202ENST00000540608 CTRLP40313 264 aa9.98□□□□□ -0.81
NPC1-202ENST00000540608 GAGE1Q13065 139 aa9.98□□□□□ -0.81
NPC1-202ENST00000540608 ZNF833PQ6ZTB9 187 aa9.98□□□□□ -0.81
NPC1-202ENST00000540608 FAM216BQ8N7L0 139 aa9.98□□□□□ -0.81
NPC1-202ENST00000540608 OSR1Q8TAX0 266 aaPredicted RBP9.98□□□□□ -0.81
NPC1-202ENST00000540608 MGAQ8IWI9 3026 aa9.98□□□□□ -0.81
NPC1-202ENST00000540608 ZNF324O75467 553 aaPredicted RBP9.98□□□□□ -0.81
NPC1-202ENST00000540608 SELENOVP59797 346 aa9.98□□□□□ -0.81
NPC1-202ENST00000540608 ERHP84090 104 aaKnown RBP9.98□□□□□ -0.81
NPC1-202ENST00000540608 OR2T6Q8NHC8 308 aa9.98□□□□□ -0.81
NPC1-202ENST00000540608 ZNF714Q96N38 554 aa9.98□□□□□ -0.81
NPC1-202ENST00000540608 ZNRD1Q9P1U0 126 aa9.98□□□□□ -0.81
NPC1-202ENST00000540608 SMG1Q96Q15 3661 aaKnown RBP9.98□□□□□ -0.81
NPC1-202ENST00000540608 hADV38S2A0JD32 116 aa9.97□□□□□ -0.81
NPC1-202ENST00000540608 INS-IGF2F8WCM5 200 aa9.97□□□□□ -0.81
NPC1-202ENST00000540608 PMCHP20382 165 aa9.97□□□□□ -0.81
NPC1-202ENST00000540608 PRRX1P54821 245 aa9.97□□□□□ -0.81
NPC1-202ENST00000540608 UBE2L3P68036 154 aaKnown RBP9.97□□□□□ -0.81
NPC1-202ENST00000540608 MORN5Q5VZ52 161 aa9.97□□□□□ -0.81
NPC1-202ENST00000540608 RASL11AQ6T310 242 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms