RNA–Protein interactions for RNA: ENST00000539563.5

LSAMP-207, Transcript of limbic system associated membrane protein, humanhuman

TSL 3 BASIC

Gene LSAMP, Length 8,821 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-207ENST00000539563 MTURNQ8N3F0 131 aa5.44□□□□□ -1.54
LSAMP-207ENST00000539563 SLC50A1Q9BRV3 221 aa5.44□□□□□ -1.54
LSAMP-207ENST00000539563 PRSS22Q9GZN4 317 aa5.44□□□□□ -1.54
LSAMP-207ENST00000539563 NPFFR1Q9GZQ6 430 aa5.44□□□□□ -1.54
LSAMP-207ENST00000539563 DMRT1Q9Y5R6 373 aa5.44□□□□□ -1.54
LSAMP-207ENST00000539563 SRP19P09132 144 aaKnown RBP5.44□□□□□ -1.54
LSAMP-207ENST00000539563 IFITM2Q01629 132 aa5.44□□□□□ -1.54
LSAMP-207ENST00000539563 COLCA1Q6ZS62 124 aa5.44□□□□□ -1.54
LSAMP-207ENST00000539563 FLVCR1-AS1Q8TAF5 88 aa5.44□□□□□ -1.54
LSAMP-207ENST00000539563 ZNF418Q8TF45 676 aaPredicted RBP5.44□□□□□ -1.54
LSAMP-207ENST00000539563 SDHCQ99643 169 aaPredicted RBP5.44□□□□□ -1.54
LSAMP-207ENST00000539563 E9PLN8 166 aa5.43□□□□□ -1.54
LSAMP-207ENST00000539563 DUSP14O95147 198 aaKnown RBP5.43□□□□□ -1.54
LSAMP-207ENST00000539563 CACNG7P62955 275 aa5.43□□□□□ -1.54
LSAMP-207ENST00000539563 VKORC1Q9BQB6 163 aa5.43□□□□□ -1.54
LSAMP-207ENST00000539563 TMEM133Q9H2Q1 129 aa5.43□□□□□ -1.54
LSAMP-207ENST00000539563 C9JCJ5 164 aa5.43□□□□□ -1.54
LSAMP-207ENST00000539563 SMAD7O15105 426 aaKnown RBP5.43□□□□□ -1.54
LSAMP-207ENST00000539563 RNASE1P07998 156 aaKnown RBP5.43□□□□□ -1.54
LSAMP-207ENST00000539563 CELA3BP08861 270 aa5.43□□□□□ -1.54
LSAMP-207ENST00000539563 CBLN1P23435 193 aa5.43□□□□□ -1.54
LSAMP-207ENST00000539563 DDTP30046 118 aa5.43□□□□□ -1.54
LSAMP-207ENST00000539563 TMEM170BQ5T4T1 132 aa5.43□□□□□ -1.54
LSAMP-207ENST00000539563 ORMDL3Q8N138 153 aa5.43□□□□□ -1.54
LSAMP-207ENST00000539563 KCNS1Q96KK3 526 aa5.43□□□□□ -1.54
LSAMP-207ENST00000539563 SCGB3A1Q96QR1 104 aa5.43□□□□□ -1.54
LSAMP-207ENST00000539563 SPRR3Q9UBC9 169 aa5.43□□□□□ -1.54
LSAMP-207ENST00000539563 DOCK9Q9BZ29 2069 aa5.43□□□□□ -1.54
LSAMP-207ENST00000539563 FABP5P3A8MUU1 101 aa5.43□□□□□ -1.54
LSAMP-207ENST00000539563 J3QRE1 110 aa5.43□□□□□ -1.54
LSAMP-207ENST00000539563 ZP1P60852 638 aa5.43□□□□□ -1.54
LSAMP-207ENST00000539563 Q5BKY6 102 aa5.43□□□□□ -1.54
LSAMP-207ENST00000539563 REC114Q7Z4M0 266 aa5.43□□□□□ -1.54
LSAMP-207ENST00000539563 STHQ8IWL8 128 aa5.43□□□□□ -1.54
LSAMP-207ENST00000539563 ZNF525Q8N782 197 aa5.43□□□□□ -1.54
LSAMP-207ENST00000539563 TMEM105Q8N8V8 129 aa5.43□□□□□ -1.54
LSAMP-207ENST00000539563 JKAMPQ9P055 326 aa5.43□□□□□ -1.54
LSAMP-207ENST00000539563 OR11H12B2RN74 326 aa5.43□□□□□ -1.54
LSAMP-207ENST00000539563 FAM216BQ8N7L0 139 aa5.43□□□□□ -1.54
LSAMP-207ENST00000539563 OR11H1Q8NG94 326 aa5.43□□□□□ -1.54
LSAMP-207ENST00000539563 OR11H2Q8NH07 326 aa5.43□□□□□ -1.54
LSAMP-207ENST00000539563 ITLN2Q8WWU7 325 aaPredicted RBP5.43□□□□□ -1.54
LSAMP-207ENST00000539563 IGHV3-66A0A0C4DH42 116 aa5.43□□□□□ -1.54
LSAMP-207ENST00000539563 M0R381 172 aa5.43□□□□□ -1.54
LSAMP-207ENST00000539563 GHRHP01286 108 aa5.43□□□□□ -1.54
LSAMP-207ENST00000539563 FHITP49789 147 aa5.43□□□□□ -1.54
LSAMP-207ENST00000539563 DOCK7Q96N67 2140 aa5.43□□□□□ -1.54
LSAMP-207ENST00000539563 PLXNA2O75051 1894 aa5.43□□□□□ -1.54
LSAMP-207ENST00000539563 H3BTX0 84 aa5.43□□□□□ -1.54
LSAMP-207ENST00000539563 NTN3O00634 580 aaPredicted RBP5.43□□□□□ -1.54
LSAMP-207ENST00000539563 NAT1P18440 290 aa5.43□□□□□ -1.54
LSAMP-207ENST00000539563 MPZP25189 248 aa5.43□□□□□ -1.54
LSAMP-207ENST00000539563 RNASE4P34096 147 aaKnown RBP5.43□□□□□ -1.54
LSAMP-207ENST00000539563 F11RQ9Y624 299 aaKnown RBP5.43□□□□□ -1.54
LSAMP-207ENST00000539563 HEATR5AQ86XA9 2040 aa5.43□□□□□ -1.54
LSAMP-207ENST00000539563 LOC102724200A0A096LPH7 203 aaPredicted RBP5.43□□□□□ -1.54
LSAMP-207ENST00000539563 CMC4P56277 68 aaPredicted RBP5.43□□□□□ -1.54
LSAMP-207ENST00000539563 LYZL4Q96KX0 146 aa5.43□□□□□ -1.54
LSAMP-207ENST00000539563 LINC01587Q99440 93 aa5.43□□□□□ -1.54
LSAMP-207ENST00000539563 VCX2Q9H322 139 aa5.43□□□□□ -1.54
LSAMP-207ENST00000539563 IGHV1-18A0A0C4DH31 117 aa5.42□□□□□ -1.54
LSAMP-207ENST00000539563 TCRBV4S1A1TA0A5B7 111 aa5.42□□□□□ -1.54
LSAMP-207ENST00000539563 C1QTNF9BB2RNN3 333 aa5.42□□□□□ -1.54
LSAMP-207ENST00000539563 APOHP02749 345 aaPredicted RBP5.42□□□□□ -1.54
LSAMP-207ENST00000539563 TIMP3P35625 211 aa5.42□□□□□ -1.54
LSAMP-207ENST00000539563 AKIRIN1Q9H9L7 192 aaPredicted RBP5.42□□□□□ -1.54
LSAMP-207ENST00000539563 TRAV14DV4A0A0A6YYC5 116 aa5.42□□□□□ -1.54
LSAMP-207ENST00000539563 TRAV24A0A0B4J272 114 aa5.42□□□□□ -1.54
LSAMP-207ENST00000539563 GRIFINA4D1Z8 144 aa5.42□□□□□ -1.54
LSAMP-207ENST00000539563 EIF3GO75821 320 aaKnown RBP eCLIP5.42□□□□□ -1.54
LSAMP-207ENST00000539563 LDLRAD2Q5SZI1 272 aa5.42□□□□□ -1.54
LSAMP-207ENST00000539563 OR13C6PQ8NH95 151 aa5.42□□□□□ -1.54
LSAMP-207ENST00000539563 SLC25A28Q96A46 364 aa5.42□□□□□ -1.54
LSAMP-207ENST00000539563 PARD6GQ9BYG4 376 aaPredicted RBP5.42□□□□□ -1.54
LSAMP-207ENST00000539563 PEF1Q9UBV8 284 aaKnown RBP5.42□□□□□ -1.54
LSAMP-207ENST00000539563 THBDP07204 575 aa5.42□□□□□ -1.54
LSAMP-207ENST00000539563 CCL20P78556 96 aa5.42□□□□□ -1.54
LSAMP-207ENST00000539563 IMMP2LQ96T52 175 aa5.42□□□□□ -1.54
LSAMP-207ENST00000539563 NCKAP5O14513 1909 aa5.42□□□□□ -1.54
LSAMP-207ENST00000539563 SAA2-SAA4A0A096LPE2 208 aa5.42□□□□□ -1.54
LSAMP-207ENST00000539563 IGHV3-35A0A0C4DH35 117 aa5.42□□□□□ -1.54
LSAMP-207ENST00000539563 SHISA3A0PJX4 238 aa5.42□□□□□ -1.54
LSAMP-207ENST00000539563 SAA1P0DJI8 122 aaPredicted RBP5.42□□□□□ -1.54
LSAMP-207ENST00000539563 SAA2P0DJI9 122 aaPredicted RBP5.42□□□□□ -1.54
LSAMP-207ENST00000539563 EGR1P18146 543 aa5.42□□□□□ -1.54
LSAMP-207ENST00000539563 GCSAMLQ5JQS6 135 aa5.42□□□□□ -1.54
LSAMP-207ENST00000539563 TMEM167AQ8TBQ9 72 aa5.42□□□□□ -1.54
LSAMP-207ENST00000539563 MAP1BP46821 2468 aaKnown RBP5.42□□□□□ -1.54
LSAMP-207ENST00000539563 IGKV3OR2-268A0A0C4DH90 116 aa5.42□□□□□ -1.54
LSAMP-207ENST00000539563 FAM201AQ5SY85 155 aa5.42□□□□□ -1.54
LSAMP-207ENST00000539563 MIR17HGQ75NE6 70 aa5.42□□□□□ -1.54
LSAMP-207ENST00000539563 ZNF837Q96EG3 531 aaPredicted RBP5.42□□□□□ -1.54
LSAMP-207ENST00000539563 STAG3L3P0CL85 134 aa5.42□□□□□ -1.54
LSAMP-207ENST00000539563 FAM166AQ6J272 317 aa5.42□□□□□ -1.54
LSAMP-207ENST00000539563 FAM89BQ8N5H3 189 aa5.42□□□□□ -1.54
LSAMP-207ENST00000539563 AHCTF1Q8WYP5 2266 aa5.42□□□□□ -1.54
LSAMP-207ENST00000539563 TRAV21A0A0B4J279 112 aa5.41□□□□□ -1.54
LSAMP-207ENST00000539563 ZNF600Q6ZNG1 722 aa5.41□□□□□ -1.54
LSAMP-207ENST00000539563 RNF126Q9BV68 326 aa5.41□□□□□ -1.54
LSAMP-207ENST00000539563 NUDT10Q8NFP7 164 aa5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 102.4 ms