RNA–Protein interactions for RNA: ENST00000539320.2

SCARB1-206, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 720 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-206ENST00000539320 RAB3DO95716 219 aa16.52■□□□□ 0.24
SCARB1-206ENST00000539320 ALDH3B2P48448 385 aa16.52■□□□□ 0.24
SCARB1-206ENST00000539320 TRIM16LQ309B1 348 aa16.52■□□□□ 0.24
SCARB1-206ENST00000539320 ODF3L2Q3SX64 289 aa16.52■□□□□ 0.24
SCARB1-206ENST00000539320 SCGB2B2Q4G0G5 96 aa16.52■□□□□ 0.24
SCARB1-206ENST00000539320 OR13C8Q8NGS7 320 aa16.52■□□□□ 0.24
SCARB1-206ENST00000539320 TERB2Q8NHR7 220 aa16.52■□□□□ 0.24
SCARB1-206ENST00000539320 ZFAND1Q8TCF1 268 aa16.52■□□□□ 0.24
SCARB1-206ENST00000539320 SMPXQ9UHP9 88 aa16.52■□□□□ 0.24
SCARB1-206ENST00000539320 PLECQ15149 4684 aaKnown RBP16.51■□□□□ 0.23
SCARB1-206ENST00000539320 IGHV7-4-1A0A0J9YVY3 117 aa16.51■□□□□ 0.23
SCARB1-206ENST00000539320 GABARAPH6UMI1 98 aa16.51■□□□□ 0.23
SCARB1-206ENST00000539320 RGS5O15539 181 aa16.51■□□□□ 0.23
SCARB1-206ENST00000539320 GNG7O60262 68 aa16.51■□□□□ 0.23
SCARB1-206ENST00000539320 YIF1AO95070 293 aa16.51■□□□□ 0.23
SCARB1-206ENST00000539320 IGHV3-48P01763 117 aa16.51■□□□□ 0.23
SCARB1-206ENST00000539320 CTSDP07339 412 aaPredicted RBP16.51■□□□□ 0.23
SCARB1-206ENST00000539320 MRPS10P82664 201 aaKnown RBP16.51■□□□□ 0.23
SCARB1-206ENST00000539320 STEAP1BQ6NZ63 245 aa16.51■□□□□ 0.23
SCARB1-206ENST00000539320 OVOL2Q9BRP0 275 aa16.51■□□□□ 0.23
SCARB1-206ENST00000539320 NXF2Q9GZY0 626 aaKnown RBP16.51■□□□□ 0.23
SCARB1-206ENST00000539320 A0A0B4J293 547 aa16.5■□□□□ 0.23
SCARB1-206ENST00000539320 INS-IGF2F8WCM5 200 aa16.5■□□□□ 0.23
SCARB1-206ENST00000539320 ST8SIA3O43173 380 aa16.5■□□□□ 0.23
SCARB1-206ENST00000539320 UCP1P25874 307 aa16.5■□□□□ 0.23
SCARB1-206ENST00000539320 APOC4P55056 127 aa16.5■□□□□ 0.23
SCARB1-206ENST00000539320 SSBP1Q04837 148 aaKnown RBP16.5■□□□□ 0.23
SCARB1-206ENST00000539320 SPCS2Q15005 226 aa16.5■□□□□ 0.23
SCARB1-206ENST00000539320 OR10C1Q96KK4 312 aa16.5■□□□□ 0.23
SCARB1-206ENST00000539320 RNF2Q99496 336 aa16.5■□□□□ 0.23
SCARB1-206ENST00000539320 PDCD10Q9BUL8 212 aa16.5■□□□□ 0.23
SCARB1-206ENST00000539320 RHPN1-AS1Q9BWJ2 59 aa16.5■□□□□ 0.23
SCARB1-206ENST00000539320 ALMS1Q8TCU4 4167 aa16.49■□□□□ 0.23
SCARB1-206ENST00000539320 CHEK1O14757 476 aa16.49■□□□□ 0.23
SCARB1-206ENST00000539320 IFNA17P01571 189 aa16.49■□□□□ 0.23
SCARB1-206ENST00000539320 SNCAP37840 140 aa16.49■□□□□ 0.23
SCARB1-206ENST00000539320 HOXA1P49639 335 aaPredicted RBP16.49■□□□□ 0.23
SCARB1-206ENST00000539320 SP6Q3SY56 376 aa16.49■□□□□ 0.23
SCARB1-206ENST00000539320 TMEM116Q8NCL8 245 aa16.49■□□□□ 0.23
SCARB1-206ENST00000539320 RNASE11Q8TAA1 199 aaKnown RBP16.49■□□□□ 0.23
SCARB1-206ENST00000539320 MARCH1Q8TCQ1 289 aa16.49■□□□□ 0.23
SCARB1-206ENST00000539320 IGHV3-49A0A0A0MS15 119 aa16.48■□□□□ 0.23
SCARB1-206ENST00000539320 CTDSP2O14595 271 aa16.48■□□□□ 0.23
SCARB1-206ENST00000539320 B3GALNT1O75752 331 aa16.48■□□□□ 0.23
SCARB1-206ENST00000539320 NPBWR1P48145 328 aa16.48■□□□□ 0.23
SCARB1-206ENST00000539320 MEF2DQ14814 521 aa16.48■□□□□ 0.23
SCARB1-206ENST00000539320 FAAP20Q6NZ36 180 aa16.48■□□□□ 0.23
SCARB1-206ENST00000539320 SMIM4Q8WVI0 70 aa16.48■□□□□ 0.23
SCARB1-206ENST00000539320 RRNAD1Q96FB5 475 aaKnown RBP16.48■□□□□ 0.23
SCARB1-206ENST00000539320 GINS3Q9BRX5 216 aa16.48■□□□□ 0.23
SCARB1-206ENST00000539320 A0A0G2JRQ6 117 aa16.47■□□□□ 0.23
SCARB1-206ENST00000539320 JTBO76095 146 aa16.47■□□□□ 0.23
SCARB1-206ENST00000539320 CLVS1Q8IUQ0 354 aaPredicted RBP16.47■□□□□ 0.23
SCARB1-206ENST00000539320 DUSP18Q8NEJ0 188 aa16.47■□□□□ 0.23
SCARB1-206ENST00000539320 ENY2Q9NPA8 101 aa16.47■□□□□ 0.23
SCARB1-206ENST00000539320 C14orf166Q9Y224 244 aaKnown RBP16.47■□□□□ 0.23
SCARB1-206ENST00000539320 TP53TG1Q9Y2A0 90 aa16.47■□□□□ 0.23
SCARB1-206ENST00000539320 TRAV14DV4A0A0A6YYC5 116 aa16.46■□□□□ 0.23
SCARB1-206ENST00000539320 KIR2DL5BA0A0G2JN68 375 aa16.46■□□□□ 0.23
SCARB1-206ENST00000539320 KIR2DL5BA0A0G2JPC4 375 aa16.46■□□□□ 0.23
SCARB1-206ENST00000539320 CORTO00230 105 aa16.46■□□□□ 0.23
SCARB1-206ENST00000539320 UBE2CO00762 179 aa16.46■□□□□ 0.23
SCARB1-206ENST00000539320 RNASE2P10153 161 aaKnown RBP16.46■□□□□ 0.23
SCARB1-206ENST00000539320 BMI1P35226 326 aa16.46■□□□□ 0.23
SCARB1-206ENST00000539320 DEFB135Q30KP9 77 aa16.46■□□□□ 0.23
SCARB1-206ENST00000539320 PVRIGQ6DKI7 326 aa16.46■□□□□ 0.23
SCARB1-206ENST00000539320 Q6ZWC4 215 aa16.46■□□□□ 0.23
SCARB1-206ENST00000539320 KIR2DL5AQ8N109 375 aa16.46■□□□□ 0.23
SCARB1-206ENST00000539320 KIR2DL5BQ8NHK3 375 aa16.46■□□□□ 0.23
SCARB1-206ENST00000539320 RAB2BQ8WUD1 216 aa16.46■□□□□ 0.23
SCARB1-206ENST00000539320 CCDC59Q9P031 241 aaKnown RBP16.46■□□□□ 0.23
SCARB1-206ENST00000539320 DISC1C4P0D8 188 aa16.45■□□□□ 0.22
SCARB1-206ENST00000539320 OR5AC1P0C628 307 aa16.45■□□□□ 0.22
SCARB1-206ENST00000539320 ETV6P41212 452 aa16.45■□□□□ 0.22
SCARB1-206ENST00000539320 RPL5P46777 297 aaKnown RBP16.45■□□□□ 0.22
SCARB1-206ENST00000539320 SUB1P53999 127 aaKnown RBP eCLIP16.45■□□□□ 0.22
SCARB1-206ENST00000539320 TOMM20LQ6UXN7 152 aa16.45■□□□□ 0.22
SCARB1-206ENST00000539320 TMEM222Q9H0R3 208 aa16.45■□□□□ 0.22
SCARB1-206ENST00000539320 IGHV3OR16-13A0A075B7E8 117 aa16.44■□□□□ 0.22
SCARB1-206ENST00000539320 IGHV3-74A0A0B4J1X5 117 aa16.44■□□□□ 0.22
SCARB1-206ENST00000539320 CTDSPLO15194 276 aa16.44■□□□□ 0.22
SCARB1-206ENST00000539320 SPRY2O43597 315 aa16.44■□□□□ 0.22
SCARB1-206ENST00000539320 RPL35AP18077 110 aaKnown RBP16.44■□□□□ 0.22
SCARB1-206ENST00000539320 TFPI2P48307 235 aa16.44■□□□□ 0.22
SCARB1-206ENST00000539320 IL18Q14116 193 aa16.44■□□□□ 0.22
SCARB1-206ENST00000539320 SURF2Q15527 256 aaPredicted RBP16.44■□□□□ 0.22
SCARB1-206ENST00000539320 ZNF600Q6ZNG1 722 aa16.44■□□□□ 0.22
SCARB1-206ENST00000539320 WFDC3Q8IUB2 231 aa16.44■□□□□ 0.22
SCARB1-206ENST00000539320 FAM219AQ8IW50 185 aa16.44■□□□□ 0.22
SCARB1-206ENST00000539320 OR4C16Q8NGL9 310 aa16.44■□□□□ 0.22
SCARB1-206ENST00000539320 GALNT14Q96FL9 552 aa16.44■□□□□ 0.22
SCARB1-206ENST00000539320 DIRAS2Q96HU8 199 aa16.44■□□□□ 0.22
SCARB1-206ENST00000539320 BCL7BQ9BQE9 202 aa16.44■□□□□ 0.22
SCARB1-206ENST00000539320 C6orf62Q9GZU0 229 aaPredicted RBP16.44■□□□□ 0.22
SCARB1-206ENST00000539320 NAA60Q9H7X0 242 aa16.44■□□□□ 0.22
SCARB1-206ENST00000539320 RABL2AQ9UBK7 228 aaPredicted RBP16.44■□□□□ 0.22
SCARB1-206ENST00000539320 RABL2BQ9UNT1 228 aa16.44■□□□□ 0.22
SCARB1-206ENST00000539320 IGKV3-7A0A075B6H7 116 aa16.43■□□□□ 0.22
SCARB1-206ENST00000539320 TEX13DA0A0J9YY54 714 aaPredicted RBP16.43■□□□□ 0.22
SCARB1-206ENST00000539320 AKAIN1P0CW23 69 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms