RNA–Protein interactions for RNA: ENST00000538909.1

CBX3P4-201, Transcript of chromobox 3 pseudogene 4, humanhuman

BASIC

Gene CBX3P4, Length 354 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3P4-201ENST00000538909 J3KT08 172 aa1.44□□□□□ -2.18
CBX3P4-201ENST00000538909 J3QKU1 62 aa1.44□□□□□ -2.18
CBX3P4-201ENST00000538909 DNASE2O00115 360 aaPredicted RBP1.44□□□□□ -2.18
CBX3P4-201ENST00000538909 SULT2B1O00204 365 aa1.44□□□□□ -2.18
CBX3P4-201ENST00000538909 CORTO00230 105 aa1.44□□□□□ -2.18
CBX3P4-201ENST00000538909 TNFRSF11BO00300 401 aa1.44□□□□□ -2.18
CBX3P4-201ENST00000538909 TAAR5O14804 337 aa1.44□□□□□ -2.18
CBX3P4-201ENST00000538909 CCL25O15444 150 aa1.44□□□□□ -2.18
CBX3P4-201ENST00000538909 CRXO43186 299 aaPredicted RBP1.44□□□□□ -2.18
CBX3P4-201ENST00000538909 MLNRO43193 412 aa1.44□□□□□ -2.18
CBX3P4-201ENST00000538909 ZNF207O43670 478 aaKnown RBP1.44□□□□□ -2.18
CBX3P4-201ENST00000538909 SOX14O95416 240 aa1.44□□□□□ -2.18
CBX3P4-201ENST00000538909 SLC2A10O95528 541 aa1.44□□□□□ -2.18
CBX3P4-201ENST00000538909 HAND1O96004 215 aa1.44□□□□□ -2.18
CBX3P4-201ENST00000538909 APOC3P02656 99 aa1.44□□□□□ -2.18
CBX3P4-201ENST00000538909 REG1AP05451 166 aa1.44□□□□□ -2.18
CBX3P4-201ENST00000538909 CD14P08571 375 aa1.44□□□□□ -2.18
CBX3P4-201ENST00000538909 H2BFMP0C1H6 154 aa1.44□□□□□ -2.18
CBX3P4-201ENST00000538909 OR5H8P0DN80 308 aa1.44□□□□□ -2.18
CBX3P4-201ENST00000538909 CD79AP11912 226 aa1.44□□□□□ -2.18
CBX3P4-201ENST00000538909 GP1BBP13224 206 aa1.44□□□□□ -2.18
CBX3P4-201ENST00000538909 CD99P14209 185 aa1.44□□□□□ -2.18
CBX3P4-201ENST00000538909 CTLA4P16410 223 aa1.44□□□□□ -2.18
CBX3P4-201ENST00000538909 MYL9P24844 172 aa1.44□□□□□ -2.18
CBX3P4-201ENST00000538909 HTR1DP28221 377 aa1.44□□□□□ -2.18
CBX3P4-201ENST00000538909 DUTP33316 252 aaKnown RBP1.44□□□□□ -2.18
CBX3P4-201ENST00000538909 POLR2IP36954 125 aaKnown RBP1.44□□□□□ -2.18
CBX3P4-201ENST00000538909 OPRL1P41146 370 aa1.44□□□□□ -2.18
CBX3P4-201ENST00000538909 KIR2DS4P43632 304 aa1.44□□□□□ -2.18
CBX3P4-201ENST00000538909 GALR1P47211 349 aa1.44□□□□□ -2.18
CBX3P4-201ENST00000538909 REG1BP48304 166 aa1.44□□□□□ -2.18
CBX3P4-201ENST00000538909 SLC25A1P53007 311 aa1.44□□□□□ -2.18
CBX3P4-201ENST00000538909 HCCSP53701 268 aa1.44□□□□□ -2.18
CBX3P4-201ENST00000538909 DLX1P56177 255 aa1.44□□□□□ -2.18
CBX3P4-201ENST00000538909 DEFA3P59666 94 aa1.44□□□□□ -2.18
CBX3P4-201ENST00000538909 RPL27P61353 136 aaKnown RBP1.44□□□□□ -2.18
CBX3P4-201ENST00000538909 NCS1P62166 190 aa1.44□□□□□ -2.18
CBX3P4-201ENST00000538909 RPL8P62917 257 aaKnown RBP1.44□□□□□ -2.18
CBX3P4-201ENST00000538909 SLC35A2P78381 396 aa1.44□□□□□ -2.18
CBX3P4-201ENST00000538909 PLGLB1Q02325 96 aa1.44□□□□□ -2.18
CBX3P4-201ENST00000538909 HIST1H1AQ02539 215 aaPredicted RBP1.44□□□□□ -2.18
CBX3P4-201ENST00000538909 CD164Q04900 197 aa1.44□□□□□ -2.18
CBX3P4-201ENST00000538909 MXD1Q05195 221 aa1.44□□□□□ -2.18
CBX3P4-201ENST00000538909 FMODQ06828 376 aa1.44□□□□□ -2.18
CBX3P4-201ENST00000538909 ENDOGQ14249 297 aaKnown RBP1.44□□□□□ -2.18
CBX3P4-201ENST00000538909 ZNF266Q14584 549 aa1.44□□□□□ -2.18
CBX3P4-201ENST00000538909 P2RY6Q15077 328 aa1.44□□□□□ -2.18
CBX3P4-201ENST00000538909 OR7A5Q15622 319 aa1.44□□□□□ -2.18
CBX3P4-201ENST00000538909 CEACAM21Q3KPI0 293 aa1.44□□□□□ -2.18
CBX3P4-201ENST00000538909 ZNF404Q494X3 552 aa1.44□□□□□ -2.18
CBX3P4-201ENST00000538909 LRRC37A5PQ49AS3 106 aa1.44□□□□□ -2.18
CBX3P4-201ENST00000538909 CLLU1Q5K131 121 aa1.44□□□□□ -2.18
CBX3P4-201ENST00000538909 TMEM69Q5SWH9 247 aa1.44□□□□□ -2.18
CBX3P4-201ENST00000538909 ZNF684Q5T5D7 378 aa1.44□□□□□ -2.18
CBX3P4-201ENST00000538909 TPTE2P1Q5T6R2 138 aa1.44□□□□□ -2.18
CBX3P4-201ENST00000538909 FAM27D1Q5T7N8 215 aa1.44□□□□□ -2.18
CBX3P4-201ENST00000538909 TSPO2Q5TGU0 170 aa1.44□□□□□ -2.18
CBX3P4-201ENST00000538909 LYRM7Q5U5X0 104 aa1.44□□□□□ -2.18
CBX3P4-201ENST00000538909 ZFAND6Q6FIF0 208 aa1.44□□□□□ -2.18
CBX3P4-201ENST00000538909 C11orf71Q6IPW1 123 aa1.44□□□□□ -2.18
CBX3P4-201ENST00000538909 UNQ9370/PRO34162Q6UXP9 181 aa1.44□□□□□ -2.18
CBX3P4-201ENST00000538909 FAM231DQ6ZW35 169 aa1.44□□□□□ -2.18
CBX3P4-201ENST00000538909 MOB1BQ7L9L4 216 aa1.44□□□□□ -2.18
CBX3P4-201ENST00000538909 FAM19A5Q7Z5A7 132 aaPredicted RBP1.44□□□□□ -2.18
CBX3P4-201ENST00000538909 HSD17B13Q7Z5P4 300 aaPredicted RBP1.44□□□□□ -2.18
CBX3P4-201ENST00000538909 MRPL55Q7Z7F7 128 aaKnown RBP1.44□□□□□ -2.18
CBX3P4-201ENST00000538909 LINC01551Q86U37 167 aa1.44□□□□□ -2.18
CBX3P4-201ENST00000538909 OAFQ86UD1 273 aa1.44□□□□□ -2.18
CBX3P4-201ENST00000538909 TGIF2LYQ8IUE0 185 aa1.44□□□□□ -2.18
CBX3P4-201ENST00000538909 MMD2Q8IY49 270 aa1.44□□□□□ -2.18
CBX3P4-201ENST00000538909 TCTE3Q8IZS6 198 aa1.44□□□□□ -2.18
CBX3P4-201ENST00000538909 LINC01561Q8N1V8 128 aa1.44□□□□□ -2.18
CBX3P4-201ENST00000538909 OSR2Q8N2R0 312 aa1.44□□□□□ -2.18
CBX3P4-201ENST00000538909 LINC00471Q8N535 108 aa1.44□□□□□ -2.18
CBX3P4-201ENST00000538909 PACRGLQ8N7B6 248 aa1.44□□□□□ -2.18
CBX3P4-201ENST00000538909 ZNF676Q8N7Q3 588 aa1.44□□□□□ -2.18
CBX3P4-201ENST00000538909 LRTM2Q8N967 370 aa1.44□□□□□ -2.18
CBX3P4-201ENST00000538909 SCCPDHQ8NBX0 429 aa1.44□□□□□ -2.18
CBX3P4-201ENST00000538909 OR4F17Q8NGA8 305 aa1.44□□□□□ -2.18
CBX3P4-201ENST00000538909 OR10G2Q8NGC3 310 aa1.44□□□□□ -2.18
CBX3P4-201ENST00000538909 OR51A2Q8NGJ7 313 aa1.44□□□□□ -2.18
CBX3P4-201ENST00000538909 OR1L8Q8NGR8 309 aa1.44□□□□□ -2.18
CBX3P4-201ENST00000538909 OR1N2Q8NGR9 330 aa1.44□□□□□ -2.18
CBX3P4-201ENST00000538909 OR13C8Q8NGS7 320 aa1.44□□□□□ -2.18
CBX3P4-201ENST00000538909 OR2G3Q8NGZ4 309 aa1.44□□□□□ -2.18
CBX3P4-201ENST00000538909 OR4F5Q8NH21 305 aa1.44□□□□□ -2.18
CBX3P4-201ENST00000538909 OR5R1Q8NH85 324 aa1.44□□□□□ -2.18
CBX3P4-201ENST00000538909 ZNF563Q8TA94 476 aa1.44□□□□□ -2.18
CBX3P4-201ENST00000538909 ZFAND1Q8TCF1 268 aa1.44□□□□□ -2.18
CBX3P4-201ENST00000538909 SSC4DQ8WTU2 575 aa1.44□□□□□ -2.18
CBX3P4-201ENST00000538909 TMEM170AQ8WVE7 144 aa1.44□□□□□ -2.18
CBX3P4-201ENST00000538909 HIST1H2BAQ96A08 127 aa1.44□□□□□ -2.18
CBX3P4-201ENST00000538909 SLC25A44Q96H78 314 aaPredicted RBP1.44□□□□□ -2.18
CBX3P4-201ENST00000538909 PGLYRP3Q96LB9 341 aa1.44□□□□□ -2.18
CBX3P4-201ENST00000538909 DNAJC30Q96LL9 226 aa1.44□□□□□ -2.18
CBX3P4-201ENST00000538909 LINC00477Q96M19 166 aa1.44□□□□□ -2.18
CBX3P4-201ENST00000538909 Q96M85 177 aa1.44□□□□□ -2.18
CBX3P4-201ENST00000538909 GPR82Q96P67 336 aa1.44□□□□□ -2.18
CBX3P4-201ENST00000538909 AP1S3Q96PC3 154 aa1.44□□□□□ -2.18
CBX3P4-201ENST00000538909 OR4F4Q96R69 305 aa1.44□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms