RNA–Protein interactions for RNA: ENST00000538886.5

GGA3-202, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 1 (best) BASIC

Gene GGA3, Length 3,766 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-202ENST00000538886 HOXA3O43365 443 aaPredicted RBP7.17□□□□□ -1.26
GGA3-202ENST00000538886 FAM106CPP0CH98 169 aa7.17□□□□□ -1.26
GGA3-202ENST00000538886 DEFB112Q30KQ8 113 aa7.17□□□□□ -1.26
GGA3-202ENST00000538886 CCDC144NLQ6NUI1 221 aa7.17□□□□□ -1.26
GGA3-202ENST00000538886 Q6P435 159 aa7.17□□□□□ -1.26
GGA3-202ENST00000538886 TMEM217Q8N7C4 229 aa7.17□□□□□ -1.26
GGA3-202ENST00000538886 OR10C1Q96KK4 312 aa7.17□□□□□ -1.26
GGA3-202ENST00000538886 AP1S3Q96PC3 154 aa7.17□□□□□ -1.26
GGA3-202ENST00000538886 NMES1Q9C002 83 aa7.17□□□□□ -1.26
GGA3-202ENST00000538886 CSTL1Q9H114 145 aa7.17□□□□□ -1.26
GGA3-202ENST00000538886 VAX2Q9UIW0 290 aa7.17□□□□□ -1.26
GGA3-202ENST00000538886 NSG2Q9Y328 171 aa7.17□□□□□ -1.26
GGA3-202ENST00000538886 CSMD2Q7Z408 3487 aa7.17□□□□□ -1.26
GGA3-202ENST00000538886 CEBPZOSA8MTT3 80 aa7.17□□□□□ -1.26
GGA3-202ENST00000538886 ZNF737O75373 536 aa7.17□□□□□ -1.26
GGA3-202ENST00000538886 LHBP01229 141 aa7.17□□□□□ -1.26
GGA3-202ENST00000538886 RND3P61587 244 aa7.17□□□□□ -1.26
GGA3-202ENST00000538886 MEF2CQ06413 473 aaPredicted RBP7.17□□□□□ -1.26
GGA3-202ENST00000538886 SPINK9Q5DT21 86 aa7.17□□□□□ -1.26
GGA3-202ENST00000538886 TEX36Q5VZQ5 186 aa7.17□□□□□ -1.26
GGA3-202ENST00000538886 VKORC1L1Q8N0U8 176 aa7.17□□□□□ -1.26
GGA3-202ENST00000538886 RPUSD4Q96CM3 377 aaKnown RBP7.17□□□□□ -1.26
GGA3-202ENST00000538886 SCGB3A2Q96PL1 93 aa7.17□□□□□ -1.26
GGA3-202ENST00000538886 IL36GQ9NZH8 169 aa7.17□□□□□ -1.26
GGA3-202ENST00000538886 ZFHX3Q15911 3703 aa7.17□□□□□ -1.26
GGA3-202ENST00000538886 TIMM23O14925 209 aa7.17□□□□□ -1.26
GGA3-202ENST00000538886 IL6RP08887 468 aaPredicted RBP7.17□□□□□ -1.26
GGA3-202ENST00000538886 TRAT1Q6PIZ9 186 aa7.17□□□□□ -1.26
GGA3-202ENST00000538886 LCN15Q6UWW0 184 aa7.17□□□□□ -1.26
GGA3-202ENST00000538886 CENPVQ7Z7K6 275 aaPredicted RBP7.17□□□□□ -1.26
GGA3-202ENST00000538886 HARBI1Q96MB7 349 aa7.17□□□□□ -1.26
GGA3-202ENST00000538886 ATP5SQ99766 215 aa7.17□□□□□ -1.26
GGA3-202ENST00000538886 STRAPQ9Y3F4 350 aaKnown RBP7.17□□□□□ -1.26
GGA3-202ENST00000538886 PLXNB1O43157 2135 aa7.17□□□□□ -1.26
GGA3-202ENST00000538886 HLA-GP17693 338 aa7.16□□□□□ -1.26
GGA3-202ENST00000538886 PIGPP57054 158 aa7.16□□□□□ -1.26
GGA3-202ENST00000538886 ERVK11-1P61568 191 aa7.16□□□□□ -1.26
GGA3-202ENST00000538886 TMEM128Q5BJH2 165 aa7.16□□□□□ -1.26
GGA3-202ENST00000538886 C3orf56Q8N813 242 aa7.16□□□□□ -1.26
GGA3-202ENST00000538886 MRPL30Q8TCC3 161 aaKnown RBP7.16□□□□□ -1.26
GGA3-202ENST00000538886 HSPB9Q9BQS6 159 aa7.16□□□□□ -1.26
GGA3-202ENST00000538886 CELSR1Q9NYQ6 3014 aa7.16□□□□□ -1.26
GGA3-202ENST00000538886 IGHV4-59P01825 116 aa7.16□□□□□ -1.26
GGA3-202ENST00000538886 PRTN3P24158 256 aa7.16□□□□□ -1.26
GGA3-202ENST00000538886 TNXAQ16473 311 aa7.16□□□□□ -1.26
GGA3-202ENST00000538886 OCIAD2Q56VL3 154 aa7.16□□□□□ -1.26
GGA3-202ENST00000538886 GAPTQ8N292 157 aa7.16□□□□□ -1.26
GGA3-202ENST00000538886 CMTM2Q8TAZ6 248 aa7.16□□□□□ -1.26
GGA3-202ENST00000538886 PINX1Q96BK5 328 aaKnown RBP7.16□□□□□ -1.26
GGA3-202ENST00000538886 AQP10Q96PS8 301 aa7.16□□□□□ -1.26
GGA3-202ENST00000538886 NBEAL1Q6ZS30 2694 aa7.16□□□□□ -1.26
GGA3-202ENST00000538886 IGKV1D-8A0A087WSZ0 117 aa7.16□□□□□ -1.26
GGA3-202ENST00000538886 FAM181BA6NEQ2 426 aa7.16□□□□□ -1.26
GGA3-202ENST00000538886 SLC25A17O43808 307 aa7.16□□□□□ -1.26
GGA3-202ENST00000538886 AVPP01185 164 aa7.16□□□□□ -1.26
GGA3-202ENST00000538886 PPYP01298 95 aa7.16□□□□□ -1.26
GGA3-202ENST00000538886 ZNF260Q3ZCT1 412 aa7.16□□□□□ -1.26
GGA3-202ENST00000538886 STPG4Q8N801 248 aa7.16□□□□□ -1.26
GGA3-202ENST00000538886 CCDC71LQ8N9Z2 235 aa7.16□□□□□ -1.26
GGA3-202ENST00000538886 SMIM7Q9BQ49 75 aa7.16□□□□□ -1.26
GGA3-202ENST00000538886 Q9N2K0 584 aa7.16□□□□□ -1.26
GGA3-202ENST00000538886 LYRM2Q9NU23 88 aaPredicted RBP7.16□□□□□ -1.26
GGA3-202ENST00000538886 HRNRQ86YZ3 2850 aaPredicted RBP7.16□□□□□ -1.26
GGA3-202ENST00000538886 IGHV1-69DA0A0B4J2H0 117 aa7.15□□□□□ -1.26
GGA3-202ENST00000538886 J3QR06 171 aa7.15□□□□□ -1.26
GGA3-202ENST00000538886 IGHV1-69P01742 117 aa7.15□□□□□ -1.26
GGA3-202ENST00000538886 HKR1P10072 659 aa7.15□□□□□ -1.26
GGA3-202ENST00000538886 GALR1P47211 349 aa7.15□□□□□ -1.26
GGA3-202ENST00000538886 CCL20P78556 96 aa7.15□□□□□ -1.26
GGA3-202ENST00000538886 ZNF497Q6ZNH5 498 aa7.15□□□□□ -1.26
GGA3-202ENST00000538886 SELENOHQ8IZQ5 122 aaKnown RBP7.15□□□□□ -1.26
GGA3-202ENST00000538886 FLYWCH2Q96CP2 140 aaKnown RBP7.15□□□□□ -1.26
GGA3-202ENST00000538886 LAMTOR2Q9Y2Q5 125 aa7.15□□□□□ -1.26
GGA3-202ENST00000538886 A0A1W2PN81 502 aa7.15□□□□□ -1.26
GGA3-202ENST00000538886 GATA3P23771 443 aa7.15□□□□□ -1.26
GGA3-202ENST00000538886 CHRNA7P36544 502 aa7.15□□□□□ -1.26
GGA3-202ENST00000538886 ACOT6Q3I5F7 207 aaPredicted RBP7.15□□□□□ -1.26
GGA3-202ENST00000538886 ZNF329Q86UD4 541 aa7.15□□□□□ -1.26
GGA3-202ENST00000538886 OR4A16Q8NH70 328 aa7.15□□□□□ -1.26
GGA3-202ENST00000538886 RTN4IP1Q8WWV3 396 aaPredicted RBP7.15□□□□□ -1.26
GGA3-202ENST00000538886 ANAPC16Q96DE5 110 aa7.15□□□□□ -1.26
GGA3-202ENST00000538886 COMMD5Q9GZQ3 224 aa7.15□□□□□ -1.26
GGA3-202ENST00000538886 CST9LQ9H4G1 147 aa7.15□□□□□ -1.26
GGA3-202ENST00000538886 A0A1B0GUS0 222 aa7.15□□□□□ -1.27
GGA3-202ENST00000538886 PSG1P11464 419 aa7.15□□□□□ -1.27
GGA3-202ENST00000538886 CNN1P51911 297 aaKnown RBP7.15□□□□□ -1.27
GGA3-202ENST00000538886 DIAPH2-AS1Q14236 149 aa7.15□□□□□ -1.27
GGA3-202ENST00000538886 OR2T6Q8NHC8 308 aa7.15□□□□□ -1.27
GGA3-202ENST00000538886 MBD6Q96DN6 1003 aa7.15□□□□□ -1.27
GGA3-202ENST00000538886 OR2W1Q9Y3N9 320 aa7.15□□□□□ -1.27
GGA3-202ENST00000538886 TRAPPC1Q9Y5R8 145 aa7.15□□□□□ -1.27
GGA3-202ENST00000538886 FBN2P35556 2912 aa7.14□□□□□ -1.27
GGA3-202ENST00000538886 CENPVL3A0A0U1RRI6 287 aa7.14□□□□□ -1.27
GGA3-202ENST00000538886 GRIFINA4D1Z8 144 aa7.14□□□□□ -1.27
GGA3-202ENST00000538886 TPPP2P59282 170 aa7.14□□□□□ -1.27
GGA3-202ENST00000538886 TDRG1Q3Y452 100 aa7.14□□□□□ -1.27
GGA3-202ENST00000538886 SPATA45Q537H7 98 aa7.14□□□□□ -1.27
GGA3-202ENST00000538886 SAMD13Q5VXD3 122 aa7.14□□□□□ -1.27
GGA3-202ENST00000538886 H2BFWTQ7Z2G1 175 aa7.14□□□□□ -1.27
GGA3-202ENST00000538886 ATOH7Q8N100 152 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms