RNA–Protein interactions for RNA: ENST00000538545.6

ACTN1-205, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 2,813 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-205ENST00000538545 CFHR4Q92496 578 aa11.29□□□□□ -0.6
ACTN1-205ENST00000538545 MISP3Q96FF7 219 aa11.29□□□□□ -0.6
ACTN1-205ENST00000538545 CCDC168Q8NDH2 2452 aa11.28□□□□□ -0.6
ACTN1-205ENST00000538545 PAGE4O60829 102 aa11.28□□□□□ -0.6
ACTN1-205ENST00000538545 RBP4P02753 201 aa11.28□□□□□ -0.6
ACTN1-205ENST00000538545 CRYGBP07316 175 aa11.28□□□□□ -0.6
ACTN1-205ENST00000538545 LGALS7P47929 136 aa11.28□□□□□ -0.6
ACTN1-205ENST00000538545 ATP5J2P56134 94 aa11.28□□□□□ -0.6
ACTN1-205ENST00000538545 C2orf83Q53S99 150 aa11.28□□□□□ -0.6
ACTN1-205ENST00000538545 TBX15Q96SF7 602 aa11.28□□□□□ -0.6
ACTN1-205ENST00000538545 ACTR3CQ9C0K3 210 aaPredicted RBP11.28□□□□□ -0.6
ACTN1-205ENST00000538545 DOK5Q9P104 306 aa11.28□□□□□ -0.6
ACTN1-205ENST00000538545 SOX21Q9Y651 276 aaPredicted RBP11.28□□□□□ -0.6
ACTN1-205ENST00000538545 S4R3C0 116 aa11.28□□□□□ -0.6
ACTN1-205ENST00000538545 IGHV4-30-2A0A087WSY4 118 aa11.28□□□□□ -0.6
ACTN1-205ENST00000538545 TRAV1-1A0A0B4J248 108 aa11.28□□□□□ -0.6
ACTN1-205ENST00000538545 ZNF727A8MUV8 499 aa11.28□□□□□ -0.6
ACTN1-205ENST00000538545 ODF3BA8MYP8 253 aa11.28□□□□□ -0.6
ACTN1-205ENST00000538545 TOX4O94842 621 aa11.28□□□□□ -0.6
ACTN1-205ENST00000538545 RPL27AP46776 148 aaKnown RBP11.28□□□□□ -0.6
ACTN1-205ENST00000538545 ZNF90Q03938 601 aa11.28□□□□□ -0.6
ACTN1-205ENST00000538545 CD69Q07108 199 aa11.28□□□□□ -0.6
ACTN1-205ENST00000538545 ACOT6Q3I5F7 207 aaPredicted RBP11.28□□□□□ -0.6
ACTN1-205ENST00000538545 SIRPDQ9H106 197 aa11.28□□□□□ -0.6
ACTN1-205ENST00000538545 APCP25054 2843 aa11.27□□□□□ -0.6
ACTN1-205ENST00000538545 A0A1W2PPV4 95 aa11.27□□□□□ -0.6
ACTN1-205ENST00000538545 C7orf77A4D0Y5 90 aa11.27□□□□□ -0.6
ACTN1-205ENST00000538545 BTBD17A6NE02 478 aa11.27□□□□□ -0.6
ACTN1-205ENST00000538545 M0R1W7 72 aa11.27□□□□□ -0.6
ACTN1-205ENST00000538545 ARL14EPLP0DKL9 152 aa11.27□□□□□ -0.6
ACTN1-205ENST00000538545 CD81P60033 236 aa11.27□□□□□ -0.6
ACTN1-205ENST00000538545 ZNF674Q2M3X9 581 aa11.27□□□□□ -0.6
ACTN1-205ENST00000538545 KLF17Q5JT82 389 aaPredicted RBP11.27□□□□□ -0.6
ACTN1-205ENST00000538545 FAM120AOSQ5T036 256 aa11.27□□□□□ -0.6
ACTN1-205ENST00000538545 OR51G1Q8NGK1 321 aa11.27□□□□□ -0.6
ACTN1-205ENST00000538545 NPIPB3Q92617 1050 aa11.27□□□□□ -0.6
ACTN1-205ENST00000538545 AMMECR1Q9Y4X0 333 aaPredicted RBP11.27□□□□□ -0.6
ACTN1-205ENST00000538545 DMRT1Q9Y5R6 373 aa11.27□□□□□ -0.6
ACTN1-205ENST00000538545 IGHV2-70DA0A0C4DH43 119 aa11.27□□□□□ -0.61
ACTN1-205ENST00000538545 SH2D7A6NKC9 451 aaPredicted RBP11.27□□□□□ -0.61
ACTN1-205ENST00000538545 H3BQ15 152 aa11.27□□□□□ -0.61
ACTN1-205ENST00000538545 HSPB1P04792 205 aaKnown RBP11.27□□□□□ -0.61
ACTN1-205ENST00000538545 MORN5Q5VZ52 161 aa11.27□□□□□ -0.61
ACTN1-205ENST00000538545 SLC16A13Q7RTY0 426 aa11.27□□□□□ -0.61
ACTN1-205ENST00000538545 MAPK1IP1LQ8NDC0 245 aa11.27□□□□□ -0.61
ACTN1-205ENST00000538545 EAF1Q96JC9 268 aaPredicted RBP11.27□□□□□ -0.61
ACTN1-205ENST00000538545 MOSP00540 346 aa11.27□□□□□ -0.61
ACTN1-205ENST00000538545 LINC00869P0C866 280 aa11.27□□□□□ -0.61
ACTN1-205ENST00000538545 FAM90A2PQ658T7 463 aa11.27□□□□□ -0.61
ACTN1-205ENST00000538545 SRSF12Q8WXF0 261 aaKnown RBP11.27□□□□□ -0.61
ACTN1-205ENST00000538545 HELZ2Q9BYK8 2649 aaKnown RBP11.26□□□□□ -0.61
ACTN1-205ENST00000538545 NCBP2LA6PVI3 153 aaKnown RBP11.26□□□□□ -0.61
ACTN1-205ENST00000538545 CYB5BO43169 146 aa11.26□□□□□ -0.61
ACTN1-205ENST00000538545 ATP5G3P48201 142 aa11.26□□□□□ -0.61
ACTN1-205ENST00000538545 MIR17HGQ75NE6 70 aa11.26□□□□□ -0.61
ACTN1-205ENST00000538545 MMD2Q8IY49 270 aa11.26□□□□□ -0.61
ACTN1-205ENST00000538545 TEX45Q8NA69 505 aa11.26□□□□□ -0.61
ACTN1-205ENST00000538545 FAM168AQ92567 244 aa11.26□□□□□ -0.61
ACTN1-205ENST00000538545 RPUSD4Q96CM3 377 aaKnown RBP11.26□□□□□ -0.61
ACTN1-205ENST00000538545 UHRF2Q96PU4 802 aa11.26□□□□□ -0.61
ACTN1-205ENST00000538545 GGACTQ9BVM4 153 aa11.26□□□□□ -0.61
ACTN1-205ENST00000538545 TEX22C9J3V5 150 aa11.26□□□□□ -0.61
ACTN1-205ENST00000538545 CNIH1O95406 144 aa11.26□□□□□ -0.61
ACTN1-205ENST00000538545 COMPP49747 757 aaPredicted RBP11.26□□□□□ -0.61
ACTN1-205ENST00000538545 KHDC3LQ587J8 217 aa11.26□□□□□ -0.61
ACTN1-205ENST00000538545 FAM78BQ5VT40 261 aa11.26□□□□□ -0.61
ACTN1-205ENST00000538545 SLC25A33Q9BSK2 321 aa11.26□□□□□ -0.61
ACTN1-205ENST00000538545 AURKAIP1Q9NWT8 199 aaPredicted RBP11.26□□□□□ -0.61
ACTN1-205ENST00000538545 TEX15Q9BXT5 2789 aa11.25□□□□□ -0.61
ACTN1-205ENST00000538545 RND2P52198 227 aa11.25□□□□□ -0.61
ACTN1-205ENST00000538545 KRTAP10-9P60411 292 aa11.25□□□□□ -0.61
ACTN1-205ENST00000538545 BRD3OSQ6XYD6 125 aa11.25□□□□□ -0.61
ACTN1-205ENST00000538545 TMEM144Q7Z5S9 345 aa11.25□□□□□ -0.61
ACTN1-205ENST00000538545 PIP4P2Q8N4L2 257 aa11.25□□□□□ -0.61
ACTN1-205ENST00000538545 OR4F5Q8NH21 305 aa11.25□□□□□ -0.61
ACTN1-205ENST00000538545 OR4A5Q8NH83 315 aa11.25□□□□□ -0.61
ACTN1-205ENST00000538545 OR4F4Q96R69 305 aa11.25□□□□□ -0.61
ACTN1-205ENST00000538545 A0A1W2PN81 502 aa11.25□□□□□ -0.61
ACTN1-205ENST00000538545 MBP02144 154 aa11.25□□□□□ -0.61
ACTN1-205ENST00000538545 SAA4P35542 130 aa11.25□□□□□ -0.61
ACTN1-205ENST00000538545 CHRNA7P36544 502 aa11.25□□□□□ -0.61
ACTN1-205ENST00000538545 CST9LP1Q5W188 147 aa11.25□□□□□ -0.61
ACTN1-205ENST00000538545 MPDU1O75352 247 aa11.24□□□□□ -0.61
ACTN1-205ENST00000538545 PDLIM4P50479 330 aa11.24□□□□□ -0.61
ACTN1-205ENST00000538545 PRR20EP86478 221 aa11.24□□□□□ -0.61
ACTN1-205ENST00000538545 PRR20CP86479 221 aa11.24□□□□□ -0.61
ACTN1-205ENST00000538545 PRR20DP86480 221 aa11.24□□□□□ -0.61
ACTN1-205ENST00000538545 PRR20BP86481 221 aa11.24□□□□□ -0.61
ACTN1-205ENST00000538545 PRR20AP86496 221 aa11.24□□□□□ -0.61
ACTN1-205ENST00000538545 NDPQ00604 133 aa11.24□□□□□ -0.61
ACTN1-205ENST00000538545 SLC35E3Q7Z769 313 aa11.24□□□□□ -0.61
ACTN1-205ENST00000538545 SLC45A2Q9UMX9 530 aa11.24□□□□□ -0.61
ACTN1-205ENST00000538545 TRAV5A0A0B4J249 113 aa11.24□□□□□ -0.61
ACTN1-205ENST00000538545 LY86O95711 162 aa11.24□□□□□ -0.61
ACTN1-205ENST00000538545 MEF2BQ02080 365 aaPredicted RBP11.24□□□□□ -0.61
ACTN1-205ENST00000538545 HIST2H2BCQ6DN03 193 aa11.24□□□□□ -0.61
ACTN1-205ENST00000538545 TMEM37Q8WXS4 190 aa11.24□□□□□ -0.61
ACTN1-205ENST00000538545 AJUBAQ96IF1 538 aa11.24□□□□□ -0.61
ACTN1-205ENST00000538545 DERL1Q9BUN8 251 aa11.24□□□□□ -0.61
ACTN1-205ENST00000538545 VAX2Q9UIW0 290 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms