RNA–Protein interactions for RNA: ENST00000538136.1

MSH6-209, Transcript of mutS homolog 6, humanhuman

TSL 2 BASIC

Gene MSH6, Length 4,055 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-209ENST00000538136 TMSB15BA0A087X1C1 80 aa5.74□□□□□ -1.49
MSH6-209ENST00000538136 PTTG1O95997 202 aa5.74□□□□□ -1.49
MSH6-209ENST00000538136 LINC00869P0C866 280 aa5.74□□□□□ -1.49
MSH6-209ENST00000538136 MFAP4P55083 255 aa5.74□□□□□ -1.49
MSH6-209ENST00000538136 KRTAP24-1Q3LI83 254 aa5.74□□□□□ -1.49
MSH6-209ENST00000538136 Q6ZPA2 131 aa5.74□□□□□ -1.49
MSH6-209ENST00000538136 OR2C3Q8N628 320 aa5.74□□□□□ -1.49
MSH6-209ENST00000538136 OR51G1Q8NGK1 321 aa5.74□□□□□ -1.49
MSH6-209ENST00000538136 TNFRSF14Q92956 283 aa5.74□□□□□ -1.49
MSH6-209ENST00000538136 TRIM63Q969Q1 353 aa5.74□□□□□ -1.49
MSH6-209ENST00000538136 GON7Q9BXV9 100 aa5.74□□□□□ -1.49
MSH6-209ENST00000538136 SLC25A32Q9H2D1 315 aa5.74□□□□□ -1.49
MSH6-209ENST00000538136 OR5AC2Q9NZP5 309 aa5.74□□□□□ -1.49
MSH6-209ENST00000538136 TBL2Q9Y4P3 447 aaKnown RBP5.74□□□□□ -1.49
MSH6-209ENST00000538136 RFNGQ9Y644 331 aa5.74□□□□□ -1.49
MSH6-209ENST00000538136 TEX50A0A1B0GTY4 177 aa5.74□□□□□ -1.49
MSH6-209ENST00000538136 A0A1W2PPI3 338 aa5.74□□□□□ -1.49
MSH6-209ENST00000538136 E7EUB6 86 aa5.74□□□□□ -1.49
MSH6-209ENST00000538136 DUS4LO95620 317 aaKnown RBP5.74□□□□□ -1.49
MSH6-209ENST00000538136 TRBV12-3P01733 135 aa5.74□□□□□ -1.49
MSH6-209ENST00000538136 ZNF705DP0CH99 300 aaPredicted RBP5.74□□□□□ -1.49
MSH6-209ENST00000538136 ZNF705BP0CI00 300 aaPredicted RBP5.74□□□□□ -1.49
MSH6-209ENST00000538136 CD1BP29016 333 aa5.74□□□□□ -1.49
MSH6-209ENST00000538136 BPIFCQ8NFQ6 507 aa5.74□□□□□ -1.49
MSH6-209ENST00000538136 PRR25Q96S07 402 aa5.74□□□□□ -1.49
MSH6-209ENST00000538136 C7orf50Q9BRJ6 194 aaKnown RBP5.74□□□□□ -1.49
MSH6-209ENST00000538136 IGLL1P15814 213 aa5.74□□□□□ -1.49
MSH6-209ENST00000538136 KIR2DS2P43631 304 aa5.74□□□□□ -1.49
MSH6-209ENST00000538136 TNFRSF9Q07011 255 aa5.74□□□□□ -1.49
MSH6-209ENST00000538136 FBLN7Q53RD9 439 aa5.74□□□□□ -1.49
MSH6-209ENST00000538136 CRIP3Q6Q6R5 217 aa5.74□□□□□ -1.49
MSH6-209ENST00000538136 C16orf82Q7Z2V1 217 aa5.74□□□□□ -1.49
MSH6-209ENST00000538136 EEF1AKMT3Q96AZ1 226 aa5.74□□□□□ -1.49
MSH6-209ENST00000538136 FAM210AQ96ND0 272 aa5.74□□□□□ -1.49
MSH6-209ENST00000538136 MMP24Q9Y5R2 645 aa5.74□□□□□ -1.49
MSH6-209ENST00000538136 CLPSL1A2RUU4 121 aa5.74□□□□□ -1.49
MSH6-209ENST00000538136 H0Y980 276 aa5.74□□□□□ -1.49
MSH6-209ENST00000538136 UPK2O00526 184 aa5.74□□□□□ -1.49
MSH6-209ENST00000538136 IL6RP08887 468 aaPredicted RBP5.74□□□□□ -1.49
MSH6-209ENST00000538136 OR1N2Q8NGR9 330 aa5.74□□□□□ -1.49
MSH6-209ENST00000538136 C16orf92Q96LL3 132 aa5.74□□□□□ -1.49
MSH6-209ENST00000538136 PLEKHA2Q9HB19 425 aa5.74□□□□□ -1.49
MSH6-209ENST00000538136 TREM1Q9NP99 234 aa5.74□□□□□ -1.49
MSH6-209ENST00000538136 A0A0G2JLM5 398 aa5.73□□□□□ -1.49
MSH6-209ENST00000538136 TRIM64CA6NLI5 447 aa5.73□□□□□ -1.49
MSH6-209ENST00000538136 M0QZK8 103 aa5.73□□□□□ -1.49
MSH6-209ENST00000538136 CCL24O00175 119 aa5.73□□□□□ -1.49
MSH6-209ENST00000538136 PROP1O75360 226 aa5.73□□□□□ -1.49
MSH6-209ENST00000538136 IGKV1-5P01602 117 aa5.73□□□□□ -1.49
MSH6-209ENST00000538136 SLC25A4P12235 298 aa5.73□□□□□ -1.49
MSH6-209ENST00000538136 NPPCP23582 126 aa5.73□□□□□ -1.49
MSH6-209ENST00000538136 SLC6A1P30531 599 aa5.73□□□□□ -1.49
MSH6-209ENST00000538136 SCAND1P57086 179 aa5.73□□□□□ -1.49
MSH6-209ENST00000538136 ASAH1Q13510 395 aa5.73□□□□□ -1.49
MSH6-209ENST00000538136 TMEM177Q53S58 311 aa5.73□□□□□ -1.49
MSH6-209ENST00000538136 NHLRC3Q5JS37 347 aa5.73□□□□□ -1.49
MSH6-209ENST00000538136 ASCL4Q6XD76 172 aa5.73□□□□□ -1.49
MSH6-209ENST00000538136 AGMATQ9BSE5 352 aa5.73□□□□□ -1.49
MSH6-209ENST00000538136 ARV1Q9H2C2 271 aa5.73□□□□□ -1.49
MSH6-209ENST00000538136 MUC4Q99102 2169 aa5.73□□□□□ -1.49
MSH6-209ENST00000538136 RPS10-NUDT3A0A1W2PQS6 291 aa5.73□□□□□ -1.49
MSH6-209ENST00000538136 M0R036 132 aa5.73□□□□□ -1.49
MSH6-209ENST00000538136 IGLV1-47P01700 117 aa5.73□□□□□ -1.49
MSH6-209ENST00000538136 MBPP02686 304 aaPredicted RBP5.73□□□□□ -1.49
MSH6-209ENST00000538136 MGST1P10620 155 aaKnown RBP5.73□□□□□ -1.49
MSH6-209ENST00000538136 ATF4P18848 351 aaPredicted RBP5.73□□□□□ -1.49
MSH6-209ENST00000538136 RAB9AP51151 201 aa5.73□□□□□ -1.49
MSH6-209ENST00000538136 DEFB1P60022 68 aa5.73□□□□□ -1.49
MSH6-209ENST00000538136 PAFAH1B2P68402 229 aa5.73□□□□□ -1.49
MSH6-209ENST00000538136 FFAR4Q5NUL3 377 aa5.73□□□□□ -1.49
MSH6-209ENST00000538136 SLC25A42Q86VD7 318 aa5.73□□□□□ -1.49
MSH6-209ENST00000538136 OR1L4Q8NGR5 311 aa5.73□□□□□ -1.49
MSH6-209ENST00000538136 ST8SIA2Q92186 375 aa5.73□□□□□ -1.49
MSH6-209ENST00000538136 SDHCQ99643 169 aaPredicted RBP5.73□□□□□ -1.49
MSH6-209ENST00000538136 ZNF436Q9C0F3 470 aaPredicted RBP5.73□□□□□ -1.49
MSH6-209ENST00000538136 PFDN2Q9UHV9 154 aa5.73□□□□□ -1.49
MSH6-209ENST00000538136 TIMM9Q9Y5J7 89 aa5.73□□□□□ -1.49
MSH6-209ENST00000538136 TGP01266 2768 aa5.73□□□□□ -1.49
MSH6-209ENST00000538136 ZNF705EA8MWA4 302 aaPredicted RBP5.73□□□□□ -1.49
MSH6-209ENST00000538136 DFFBO76075 338 aa5.73□□□□□ -1.49
MSH6-209ENST00000538136 ZNF90Q03938 601 aa5.73□□□□□ -1.49
MSH6-209ENST00000538136 PMS2P11Q13670 270 aa5.73□□□□□ -1.49
MSH6-209ENST00000538136 HAGHQ16775 308 aa5.73□□□□□ -1.49
MSH6-209ENST00000538136 NOXA1Q86UR1 476 aa5.73□□□□□ -1.49
MSH6-209ENST00000538136 ZBTB34Q8NCN2 500 aa5.73□□□□□ -1.49
MSH6-209ENST00000538136 SCARB1Q8WTV0 552 aa5.73□□□□□ -1.49
MSH6-209ENST00000538136 CIB3Q96Q77 187 aaPredicted RBP5.73□□□□□ -1.49
MSH6-209ENST00000538136 RHOFQ9HBH0 211 aa5.73□□□□□ -1.49
MSH6-209ENST00000538136 DEFB4AO15263 64 aa5.72□□□□□ -1.49
MSH6-209ENST00000538136 GSTZ1O43708 216 aaPredicted RBP5.72□□□□□ -1.49
MSH6-209ENST00000538136 PRAF2O60831 178 aa5.72□□□□□ -1.49
MSH6-209ENST00000538136 B2MP61769 119 aa5.72□□□□□ -1.49
MSH6-209ENST00000538136 CADM3Q8N126 398 aa5.72□□□□□ -1.49
MSH6-209ENST00000538136 STOML3Q8TAV4 291 aa5.72□□□□□ -1.49
MSH6-209ENST00000538136 A0A0B4J293 547 aa5.72□□□□□ -1.49
MSH6-209ENST00000538136 MMP9P14780 707 aa5.72□□□□□ -1.49
MSH6-209ENST00000538136 MFAP2P55001 183 aa5.72□□□□□ -1.49
MSH6-209ENST00000538136 SPCS3P61009 180 aa5.72□□□□□ -1.49
MSH6-209ENST00000538136 TMEM187Q14656 261 aa5.72□□□□□ -1.49
MSH6-209ENST00000538136 GCSAMLQ5JQS6 135 aa5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms