RNA–Protein interactions for RNA: ENST00000536212.1

VPS33A-203, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 4

Gene VPS33A, Length 567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-203ENST00000536212 RPL31P62899 125 aaKnown RBP4.67□□□□□ -1.66
VPS33A-203ENST00000536212 PAFAH1B2P68402 229 aa4.67□□□□□ -1.66
VPS33A-203ENST00000536212 Q0VG73 95 aa4.67□□□□□ -1.66
VPS33A-203ENST00000536212 SCGB2A2Q13296 93 aa4.67□□□□□ -1.66
VPS33A-203ENST00000536212 RAB31Q13636 194 aa4.67□□□□□ -1.66
VPS33A-203ENST00000536212 ADIPOQQ15848 244 aa4.67□□□□□ -1.66
VPS33A-203ENST00000536212 LTC4SQ16873 150 aa4.67□□□□□ -1.66
VPS33A-203ENST00000536212 RNF151Q2KHN1 245 aa4.67□□□□□ -1.66
VPS33A-203ENST00000536212 COX19Q49B96 90 aa4.67□□□□□ -1.66
VPS33A-203ENST00000536212 SPRNQ5BIV9 151 aa4.67□□□□□ -1.66
VPS33A-203ENST00000536212 TIMM23BQ5SRD1 257 aa4.67□□□□□ -1.66
VPS33A-203ENST00000536212 SPATA31B1PQ5VZV4 182 aa4.67□□□□□ -1.66
VPS33A-203ENST00000536212 OR4A47Q6IF82 309 aa4.67□□□□□ -1.66
VPS33A-203ENST00000536212 SEM1Q6ZVN7 128 aa4.67□□□□□ -1.66
VPS33A-203ENST00000536212 VKORC1L1Q8N0U8 176 aa4.67□□□□□ -1.66
VPS33A-203ENST00000536212 TMEM256Q8N2U0 113 aa4.67□□□□□ -1.66
VPS33A-203ENST00000536212 FDCSPQ8NFU4 85 aa4.67□□□□□ -1.66
VPS33A-203ENST00000536212 OR2Z1Q8NG97 314 aa4.67□□□□□ -1.66
VPS33A-203ENST00000536212 SMIM12Q96EX1 92 aa4.67□□□□□ -1.66
VPS33A-203ENST00000536212 PERPQ96FX8 193 aa4.67□□□□□ -1.66
VPS33A-203ENST00000536212 SLC35E1Q96K37 410 aa4.67□□□□□ -1.66
VPS33A-203ENST00000536212 UHRF2Q96PU4 802 aa4.67□□□□□ -1.66
VPS33A-203ENST00000536212 C19orf24Q9BVV8 132 aa4.67□□□□□ -1.66
VPS33A-203ENST00000536212 FAM234AQ9H0X4 552 aa4.67□□□□□ -1.66
VPS33A-203ENST00000536212 TMEM167BQ9NRX6 74 aa4.67□□□□□ -1.66
VPS33A-203ENST00000536212 PRNDQ9UKY0 176 aa4.67□□□□□ -1.66
VPS33A-203ENST00000536212 TP53TG3Q9ULZ0 132 aa4.67□□□□□ -1.66
VPS33A-203ENST00000536212 FZR1Q9UM11 496 aa4.67□□□□□ -1.66
VPS33A-203ENST00000536212 V9GYV3 84 aa4.67□□□□□ -1.66
VPS33A-203ENST00000536212 MED12LQ86YW9 2145 aa4.66□□□□□ -1.66
VPS33A-203ENST00000536212 IGHV3OR15-7A0A075B7D8 119 aa4.66□□□□□ -1.66
VPS33A-203ENST00000536212 SAA2-SAA4A0A096LPE2 208 aa4.66□□□□□ -1.66
VPS33A-203ENST00000536212 ZNF705GA8MUZ8 300 aaPredicted RBP4.66□□□□□ -1.66
VPS33A-203ENST00000536212 K7EP13 123 aa4.66□□□□□ -1.66
VPS33A-203ENST00000536212 NKX2-8O15522 239 aa4.66□□□□□ -1.66
VPS33A-203ENST00000536212 FOXH1O75593 365 aa4.66□□□□□ -1.66
VPS33A-203ENST00000536212 CEACAM4O75871 244 aa4.66□□□□□ -1.66
VPS33A-203ENST00000536212 SAA2P0DJI9 122 aaPredicted RBP4.66□□□□□ -1.66
VPS33A-203ENST00000536212 SCGB1A1P11684 91 aa4.66□□□□□ -1.66
VPS33A-203ENST00000536212 IGFBP2P18065 325 aa4.66□□□□□ -1.66
VPS33A-203ENST00000536212 CCL11P51671 97 aa4.66□□□□□ -1.66
VPS33A-203ENST00000536212 RBX1P62877 108 aa4.66□□□□□ -1.66
VPS33A-203ENST00000536212 MRPS11P82912 194 aaKnown RBP4.66□□□□□ -1.66
VPS33A-203ENST00000536212 PRCDQ00LT1 54 aa4.66□□□□□ -1.66
VPS33A-203ENST00000536212 RTL8BQ17RB0 113 aa4.66□□□□□ -1.66
VPS33A-203ENST00000536212 HLA-DRB5Q30154 266 aa4.66□□□□□ -1.66
VPS33A-203ENST00000536212 C2orf83Q53S99 150 aa4.66□□□□□ -1.66
VPS33A-203ENST00000536212 UTF1Q5T230 341 aa4.66□□□□□ -1.66
VPS33A-203ENST00000536212 STUMQ69YW2 141 aa4.66□□□□□ -1.66
VPS33A-203ENST00000536212 TCF23Q7RTU1 214 aa4.66□□□□□ -1.66
VPS33A-203ENST00000536212 PIP4P1Q86T03 277 aa4.66□□□□□ -1.66
VPS33A-203ENST00000536212 LRP11Q86VZ4 500 aa4.66□□□□□ -1.66
VPS33A-203ENST00000536212 MTURNQ8N3F0 131 aa4.66□□□□□ -1.66
VPS33A-203ENST00000536212 ZNRF1Q8ND25 227 aa4.66□□□□□ -1.66
VPS33A-203ENST00000536212 OR1L8Q8NGR8 309 aa4.66□□□□□ -1.66
VPS33A-203ENST00000536212 ITLN1Q8WWA0 313 aa4.66□□□□□ -1.66
VPS33A-203ENST00000536212 SSMEM1Q8WWF3 244 aa4.66□□□□□ -1.66
VPS33A-203ENST00000536212 ZNF503Q96F45 646 aa4.66□□□□□ -1.66
VPS33A-203ENST00000536212 MS4A10Q96PG2 267 aa4.66□□□□□ -1.66
VPS33A-203ENST00000536212 OR2V2Q96R30 315 aa4.66□□□□□ -1.66
VPS33A-203ENST00000536212 C20orf144Q9BQM9 153 aa4.66□□□□□ -1.66
VPS33A-203ENST00000536212 ENY2Q9NPA8 101 aa4.66□□□□□ -1.66
VPS33A-203ENST00000536212 OSTCQ9NRP0 149 aa4.66□□□□□ -1.66
VPS33A-203ENST00000536212 TMEM106BQ9NUM4 274 aa4.66□□□□□ -1.66
VPS33A-203ENST00000536212 AURKAIP1Q9NWT8 199 aaPredicted RBP4.66□□□□□ -1.66
VPS33A-203ENST00000536212 TECRQ9NZ01 308 aaKnown RBP4.66□□□□□ -1.66
VPS33A-203ENST00000536212 NAGKQ9UJ70 344 aa4.66□□□□□ -1.66
VPS33A-203ENST00000536212 LAMA2P24043 3122 aaKnown RBP4.66□□□□□ -1.66
VPS33A-203ENST00000536212 LAMA3Q16787 3333 aa4.66□□□□□ -1.66
VPS33A-203ENST00000536212 PTPRBP23467 1997 aa4.65□□□□□ -1.66
VPS33A-203ENST00000536212 A0A1B0GUS0 222 aa4.65□□□□□ -1.67
VPS33A-203ENST00000536212 A0A1B0GV72 72 aa4.65□□□□□ -1.67
VPS33A-203ENST00000536212 A0A1W2PRE2 83 aa4.65□□□□□ -1.67
VPS33A-203ENST00000536212 ISLRO14498 428 aa4.65□□□□□ -1.67
VPS33A-203ENST00000536212 SNRPCP09234 159 aaKnown RBP4.65□□□□□ -1.67
VPS33A-203ENST00000536212 CT45A6P0DMU7 189 aa4.65□□□□□ -1.67
VPS33A-203ENST00000536212 CT45A5P0DMU8 189 aa4.65□□□□□ -1.67
VPS33A-203ENST00000536212 CT45A7P0DMV0 189 aa4.65□□□□□ -1.67
VPS33A-203ENST00000536212 RNASE2P10153 161 aaKnown RBP4.65□□□□□ -1.67
VPS33A-203ENST00000536212 ZNF25P17030 456 aaPredicted RBP4.65□□□□□ -1.67
VPS33A-203ENST00000536212 WT1P19544 449 aaPredicted RBP4.65□□□□□ -1.67
VPS33A-203ENST00000536212 BMP5P22003 454 aa4.65□□□□□ -1.67
VPS33A-203ENST00000536212 SLURP1P55000 103 aa4.65□□□□□ -1.67
VPS33A-203ENST00000536212 KLF3P57682 345 aaPredicted RBP4.65□□□□□ -1.67
VPS33A-203ENST00000536212 TPPP2P59282 170 aa4.65□□□□□ -1.67
VPS33A-203ENST00000536212 RPS20P60866 119 aaKnown RBP4.65□□□□□ -1.67
VPS33A-203ENST00000536212 RANP62826 216 aaKnown RBP4.65□□□□□ -1.67
VPS33A-203ENST00000536212 ZNF90Q03938 601 aa4.65□□□□□ -1.67
VPS33A-203ENST00000536212 SRSF6Q13247 344 aaKnown RBP4.65□□□□□ -1.67
VPS33A-203ENST00000536212 TEX36Q5VZQ5 186 aa4.65□□□□□ -1.67
VPS33A-203ENST00000536212 ZNF474Q6S9Z5 364 aaPredicted RBP4.65□□□□□ -1.67
VPS33A-203ENST00000536212 TEX43Q6ZNM6 134 aa4.65□□□□□ -1.67
VPS33A-203ENST00000536212 PQLC2Q6ZP29 291 aa4.65□□□□□ -1.67
VPS33A-203ENST00000536212 ZNF788Q6ZQV5 615 aa4.65□□□□□ -1.67
VPS33A-203ENST00000536212 SLC25A48Q6ZT89 311 aaKnown RBP4.65□□□□□ -1.67
VPS33A-203ENST00000536212 Q6ZWC4 215 aa4.65□□□□□ -1.67
VPS33A-203ENST00000536212 MIR17HGQ75NE6 70 aa4.65□□□□□ -1.67
VPS33A-203ENST00000536212 OR4P4Q8NGL7 312 aa4.65□□□□□ -1.67
VPS33A-203ENST00000536212 OR1L6Q8NGR2 347 aa4.65□□□□□ -1.67
VPS33A-203ENST00000536212 OR5B3Q8NH48 314 aa4.65□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms