RNA–Protein interactions for RNA: ENST00000535977.5

RAB40C-203, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RAB40C, Length 2,717 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-203ENST00000535977 TP73-AS1Q9UF72 201 aa14.75□□□□□ -0.05
RAB40C-203ENST00000535977 C15orf62A8K5M9 175 aa14.74□□□□□ -0.05
RAB40C-203ENST00000535977 M0R1X1 148 aa14.74□□□□□ -0.05
RAB40C-203ENST00000535977 LOXL3P58215 753 aa14.74□□□□□ -0.05
RAB40C-203ENST00000535977 ZNF474Q6S9Z5 364 aaPredicted RBP14.74□□□□□ -0.05
RAB40C-203ENST00000535977 Q6ZS92 163 aa14.74□□□□□ -0.05
RAB40C-203ENST00000535977 WDR83OSQ9Y284 106 aa14.74□□□□□ -0.05
RAB40C-203ENST00000535977 INTS1Q8N201 2190 aaKnown RBP14.74□□□□□ -0.05
RAB40C-203ENST00000535977 HEATR1Q9H583 2144 aaKnown RBP14.74□□□□□ -0.05
RAB40C-203ENST00000535977 OR10J3Q5JRS4 329 aa14.74□□□□□ -0.05
RAB40C-203ENST00000535977 NAT8BQ9UHF3 227 aa14.74□□□□□ -0.05
RAB40C-203ENST00000535977 PROP1O75360 226 aa14.73□□□□□ -0.05
RAB40C-203ENST00000535977 OR9G9P0C7N8 305 aa14.73□□□□□ -0.05
RAB40C-203ENST00000535977 IGLL1P15814 213 aa14.73□□□□□ -0.05
RAB40C-203ENST00000535977 NTF3P20783 257 aa14.73□□□□□ -0.05
RAB40C-203ENST00000535977 CD1BP29016 333 aa14.73□□□□□ -0.05
RAB40C-203ENST00000535977 RPS16P62249 146 aaKnown RBP14.73□□□□□ -0.05
RAB40C-203ENST00000535977 LTC4SQ16873 150 aa14.73□□□□□ -0.05
RAB40C-203ENST00000535977 MPV17L2Q567V2 206 aa14.73□□□□□ -0.05
RAB40C-203ENST00000535977 MOGAT3Q86VF5 341 aa14.73□□□□□ -0.05
RAB40C-203ENST00000535977 FAM222BQ8WU58 562 aa14.73□□□□□ -0.05
RAB40C-203ENST00000535977 BORCS7Q96B45 105 aa14.73□□□□□ -0.05
RAB40C-203ENST00000535977 GNB1LQ9BYB4 327 aa14.73□□□□□ -0.05
RAB40C-203ENST00000535977 CALYQ9NYX4 217 aa14.73□□□□□ -0.05
RAB40C-203ENST00000535977 TRAV9-2A0A087WT02 112 aa14.73□□□□□ -0.05
RAB40C-203ENST00000535977 SPINK4O60575 86 aa14.73□□□□□ -0.05
RAB40C-203ENST00000535977 REG1AP05451 166 aa14.73□□□□□ -0.05
RAB40C-203ENST00000535977 CGB3P0DN86 165 aa14.73□□□□□ -0.05
RAB40C-203ENST00000535977 CGB7P0DN87 165 aa14.73□□□□□ -0.05
RAB40C-203ENST00000535977 MSMPQ1L6U9 139 aa14.73□□□□□ -0.05
RAB40C-203ENST00000535977 TMEM30BQ3MIR4 351 aa14.73□□□□□ -0.05
RAB40C-203ENST00000535977 WFDC8Q8IUA0 241 aa14.73□□□□□ -0.05
RAB40C-203ENST00000535977 NEUROG1Q92886 237 aa14.73□□□□□ -0.05
RAB40C-203ENST00000535977 SCO2A0A1W2PP80 73 aa14.72□□□□□ -0.05
RAB40C-203ENST00000535977 GAGE12BA1L429 117 aa14.72□□□□□ -0.05
RAB40C-203ENST00000535977 K7EN84 100 aa14.72□□□□□ -0.05
RAB40C-203ENST00000535977 PMCHL1Q16048 86 aa14.72□□□□□ -0.05
RAB40C-203ENST00000535977 RAB1CQ92928 201 aa14.72□□□□□ -0.05
RAB40C-203ENST00000535977 SAP30O75446 220 aa14.72□□□□□ -0.05
RAB40C-203ENST00000535977 EDDM3BP56851 147 aa14.72□□□□□ -0.05
RAB40C-203ENST00000535977 TMPRSS3P57727 454 aa14.72□□□□□ -0.05
RAB40C-203ENST00000535977 GCSAMLQ5JQS6 135 aa14.72□□□□□ -0.05
RAB40C-203ENST00000535977 C19orf35Q6ZS72 473 aa14.72□□□□□ -0.05
RAB40C-203ENST00000535977 MMD2Q8IY49 270 aa14.72□□□□□ -0.05
RAB40C-203ENST00000535977 OR8I2Q8N0Y5 310 aa14.72□□□□□ -0.05
RAB40C-203ENST00000535977 OR4S2Q8NH73 311 aa14.72□□□□□ -0.05
RAB40C-203ENST00000535977 TSKUQ8WUA8 353 aa14.72□□□□□ -0.05
RAB40C-203ENST00000535977 ADTRPQ96IZ2 230 aa14.72□□□□□ -0.05
RAB40C-203ENST00000535977 CHODLQ9H9P2 273 aa14.72□□□□□ -0.05
RAB40C-203ENST00000535977 FAM215AQ9Y5M1 114 aa14.72□□□□□ -0.05
RAB40C-203ENST00000535977 TRBV9A0A0B4J1U6 114 aa14.72□□□□□ -0.05
RAB40C-203ENST00000535977 TRAV38-1A0A0B4J264 116 aa14.72□□□□□ -0.05
RAB40C-203ENST00000535977 OR4P4Q8NGL7 312 aa14.72□□□□□ -0.05
RAB40C-203ENST00000535977 IFI27L2Q9H2X8 130 aa14.72□□□□□ -0.05
RAB40C-203ENST00000535977 RNF7Q9UBF6 113 aa14.72□□□□□ -0.05
RAB40C-203ENST00000535977 PTPRBP23467 1997 aa14.71□□□□□ -0.05
RAB40C-203ENST00000535977 TOX4O94842 621 aa14.71□□□□□ -0.05
RAB40C-203ENST00000535977 LINC00205P59089 165 aa14.71□□□□□ -0.05
RAB40C-203ENST00000535977 RPEL1Q2QD12 228 aa14.71□□□□□ -0.05
RAB40C-203ENST00000535977 ZNRF1Q8ND25 227 aa14.71□□□□□ -0.05
RAB40C-203ENST00000535977 ITLN1Q8WWA0 313 aa14.71□□□□□ -0.05
RAB40C-203ENST00000535977 IGHV3OR15-7A0A075B7D8 119 aa14.71□□□□□ -0.06
RAB40C-203ENST00000535977 TRGV8A0A0C4DH27 118 aa14.71□□□□□ -0.06
RAB40C-203ENST00000535977 SPRY3O43610 288 aa14.71□□□□□ -0.06
RAB40C-203ENST00000535977 SRIP30626 198 aa14.71□□□□□ -0.06
RAB40C-203ENST00000535977 ST6GALNAC6Q969X2 333 aa14.71□□□□□ -0.06
RAB40C-203ENST00000535977 FAM234AQ9H0X4 552 aa14.71□□□□□ -0.06
RAB40C-203ENST00000535977 HEYLQ9NQ87 328 aaPredicted RBP14.71□□□□□ -0.06
RAB40C-203ENST00000535977 KBTBD11-OT1A0A1B0GTJ5 212 aa14.7□□□□□ -0.06
RAB40C-203ENST00000535977 CORTO00230 105 aa14.7□□□□□ -0.06
RAB40C-203ENST00000535977 VDAC2P45880 294 aaPredicted RBP14.7□□□□□ -0.06
RAB40C-203ENST00000535977 DDB2Q92466 427 aa14.7□□□□□ -0.06
RAB40C-203ENST00000535977 TNFRSF14Q92956 283 aa14.7□□□□□ -0.06
RAB40C-203ENST00000535977 WASHC3Q9Y3C0 194 aa14.7□□□□□ -0.06
RAB40C-203ENST00000535977 TRGV10A0A0A0MS01 117 aa14.7□□□□□ -0.06
RAB40C-203ENST00000535977 OPRK1P41145 380 aa14.7□□□□□ -0.06
RAB40C-203ENST00000535977 Q56UQ5 140 aa14.7□□□□□ -0.06
RAB40C-203ENST00000535977 TXNDC17Q9BRA2 123 aa14.7□□□□□ -0.06
RAB40C-203ENST00000535977 LAMA5O15230 3695 aa14.7□□□□□ -0.06
RAB40C-203ENST00000535977 H0YJW9 148 aa14.69□□□□□ -0.06
RAB40C-203ENST00000535977 RHOBP62745 196 aa14.69□□□□□ -0.06
RAB40C-203ENST00000535977 SPINK9Q5DT21 86 aa14.69□□□□□ -0.06
RAB40C-203ENST00000535977 FRYQ5TBA9 3013 aa14.69□□□□□ -0.06
RAB40C-203ENST00000535977 DIDO1Q9BTC0 2240 aaKnown RBP14.69□□□□□ -0.06
RAB40C-203ENST00000535977 ZNF134P52741 427 aa14.69□□□□□ -0.06
RAB40C-203ENST00000535977 C17orf58Q2M2W7 97 aa14.69□□□□□ -0.06
RAB40C-203ENST00000535977 RPL39P5Q59GN2 51 aa14.69□□□□□ -0.06
RAB40C-203ENST00000535977 TMEM136Q6ZRR5 245 aa14.69□□□□□ -0.06
RAB40C-203ENST00000535977 CLUHP3Q96NS8 147 aa14.69□□□□□ -0.06
RAB40C-203ENST00000535977 TMEM140Q9NV12 185 aa14.69□□□□□ -0.06
RAB40C-203ENST00000535977 A0A1W2PPV4 95 aa14.68□□□□□ -0.06
RAB40C-203ENST00000535977 TM4SF5O14894 197 aa14.68□□□□□ -0.06
RAB40C-203ENST00000535977 Q8TCH9 128 aa14.68□□□□□ -0.06
RAB40C-203ENST00000535977 BMPR1BO00238 502 aa14.68□□□□□ -0.06
RAB40C-203ENST00000535977 SLC35B1P78383 322 aa14.68□□□□□ -0.06
RAB40C-203ENST00000535977 TNFAIP6P98066 277 aaPredicted RBP14.68□□□□□ -0.06
RAB40C-203ENST00000535977 PSG9Q00887 426 aa14.68□□□□□ -0.06
RAB40C-203ENST00000535977 Q8N7P7 452 aa14.68□□□□□ -0.06
RAB40C-203ENST00000535977 LINC00574Q9H8X3 128 aa14.68□□□□□ -0.06
RAB40C-203ENST00000535977 PRR14LQ5THK1 2151 aa14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms