RNA–Protein interactions for RNA: ENST00000535717.1

CHD4-203, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2

Gene CHD4, Length 660 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-203ENST00000535717 MARVELD1Q9BSK0 173 aa9.33□□□□□ -0.92
CHD4-203ENST00000535717 FBXL7Q9UJT9 491 aa9.33□□□□□ -0.92
CHD4-203ENST00000535717 F11RQ9Y624 299 aaKnown RBP9.33□□□□□ -0.92
CHD4-203ENST00000535717 INMT-MINDY4F8WBC2 141 aa9.32□□□□□ -0.92
CHD4-203ENST00000535717 INS-IGF2F8WCM5 200 aa9.32□□□□□ -0.92
CHD4-203ENST00000535717 PITX3O75364 302 aa9.32□□□□□ -0.92
CHD4-203ENST00000535717 PF4P02776 101 aa9.32□□□□□ -0.92
CHD4-203ENST00000535717 IL5P05113 134 aa9.32□□□□□ -0.92
CHD4-203ENST00000535717 SLC25A6P12236 298 aa9.32□□□□□ -0.92
CHD4-203ENST00000535717 MYCNOSP40205 109 aa9.32□□□□□ -0.92
CHD4-203ENST00000535717 HOXA1P49639 335 aaPredicted RBP9.32□□□□□ -0.92
CHD4-203ENST00000535717 ERHP84090 104 aaKnown RBP9.32□□□□□ -0.92
CHD4-203ENST00000535717 TNFRSF9Q07011 255 aa9.32□□□□□ -0.92
CHD4-203ENST00000535717 C15orf32Q32M92 178 aa9.32□□□□□ -0.92
CHD4-203ENST00000535717 SLC25A24Q6NUK1 477 aa9.32□□□□□ -0.92
CHD4-203ENST00000535717 ZNF343Q6P1L6 599 aa9.32□□□□□ -0.92
CHD4-203ENST00000535717 MRPL41Q8IXM3 137 aaKnown RBP9.32□□□□□ -0.92
CHD4-203ENST00000535717 OR1N2Q8NGR9 330 aa9.32□□□□□ -0.92
CHD4-203ENST00000535717 OR1S1Q8NH92 325 aa9.32□□□□□ -0.92
CHD4-203ENST00000535717 P2RX4Q99571 388 aa9.32□□□□□ -0.92
CHD4-203ENST00000535717 HSPB7Q9UBY9 170 aa9.32□□□□□ -0.92
CHD4-203ENST00000535717 BOLA1Q9Y3E2 137 aa9.32□□□□□ -0.92
CHD4-203ENST00000535717 RPS10-NUDT3A0A1W2PQS6 291 aa9.31□□□□□ -0.92
CHD4-203ENST00000535717 MPTX1A8MV57 137 aa9.31□□□□□ -0.92
CHD4-203ENST00000535717 ZP3P21754 424 aa9.31□□□□□ -0.92
CHD4-203ENST00000535717 FHL3Q13643 280 aa9.31□□□□□ -0.92
CHD4-203ENST00000535717 EXOSC2Q13868 293 aaKnown RBP9.31□□□□□ -0.92
CHD4-203ENST00000535717 C11orf87Q6NUJ2 197 aa9.31□□□□□ -0.92
CHD4-203ENST00000535717 LINC00482Q8N8I6 264 aa9.31□□□□□ -0.92
CHD4-203ENST00000535717 ZNF114Q8NC26 417 aa9.31□□□□□ -0.92
CHD4-203ENST00000535717 OR11H1Q8NG94 326 aa9.31□□□□□ -0.92
CHD4-203ENST00000535717 OR1P1Q8NH06 330 aa9.31□□□□□ -0.92
CHD4-203ENST00000535717 CITED4Q96RK1 184 aa9.31□□□□□ -0.92
CHD4-203ENST00000535717 ENY2Q9NPA8 101 aa9.31□□□□□ -0.92
CHD4-203ENST00000535717 CACFD1Q9UGQ2 172 aa9.31□□□□□ -0.92
CHD4-203ENST00000535717 S4R3C0 116 aa9.31□□□□□ -0.92
CHD4-203ENST00000535717 NOTCH1P46531 2555 aa9.31□□□□□ -0.92
CHD4-203ENST00000535717 NOTCH3Q9UM47 2321 aa9.3□□□□□ -0.92
CHD4-203ENST00000535717 IGHV4OR15-8A0A075B7B6 117 aa9.3□□□□□ -0.92
CHD4-203ENST00000535717 A0A087WW49 117 aa9.3□□□□□ -0.92
CHD4-203ENST00000535717 C7orf66A4D0T2 115 aa9.3□□□□□ -0.92
CHD4-203ENST00000535717 MFSD2BA6NFX1 497 aa9.3□□□□□ -0.92
CHD4-203ENST00000535717 CEBPZOSA8MTT3 80 aa9.3□□□□□ -0.92
CHD4-203ENST00000535717 CYB5BO43169 146 aa9.3□□□□□ -0.92
CHD4-203ENST00000535717 IFNA21P01568 189 aa9.3□□□□□ -0.92
CHD4-203ENST00000535717 TRBV12-3P01733 135 aa9.3□□□□□ -0.92
CHD4-203ENST00000535717 HSPB1P04792 205 aaKnown RBP9.3□□□□□ -0.92
CHD4-203ENST00000535717 RNASE2P10153 161 aaKnown RBP9.3□□□□□ -0.92
CHD4-203ENST00000535717 SNCAP37840 140 aa9.3□□□□□ -0.92
CHD4-203ENST00000535717 ZNF616Q08AN1 781 aa9.3□□□□□ -0.92
CHD4-203ENST00000535717 TATDN3Q17R31 274 aa9.3□□□□□ -0.92
CHD4-203ENST00000535717 TEX261Q6UWH6 196 aa9.3□□□□□ -0.92
CHD4-203ENST00000535717 C12orf45Q8N5I9 185 aaPredicted RBP9.3□□□□□ -0.92
CHD4-203ENST00000535717 UXS1Q8NBZ7 420 aa9.3□□□□□ -0.92
CHD4-203ENST00000535717 OR1L6Q8NGR2 347 aa9.3□□□□□ -0.92
CHD4-203ENST00000535717 RBKSQ9H477 322 aa9.3□□□□□ -0.92
CHD4-203ENST00000535717 HEYLQ9NQ87 328 aaPredicted RBP9.3□□□□□ -0.92
CHD4-203ENST00000535717 THYN1Q9P016 225 aa9.3□□□□□ -0.92
CHD4-203ENST00000535717 ALG5Q9Y673 324 aa9.3□□□□□ -0.92
CHD4-203ENST00000535717 U3KQ87 197 aa9.3□□□□□ -0.92
CHD4-203ENST00000535717 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.29□□□□□ -0.92
CHD4-203ENST00000535717 LINC01619G3V211 115 aa9.29□□□□□ -0.92
CHD4-203ENST00000535717 PRAF2O60831 178 aa9.29□□□□□ -0.92
CHD4-203ENST00000535717 IFNA7P01567 189 aa9.29□□□□□ -0.92
CHD4-203ENST00000535717 IGHV3-23P01764 117 aa9.29□□□□□ -0.92
CHD4-203ENST00000535717 BSXQ3C1V8 233 aa9.29□□□□□ -0.92
CHD4-203ENST00000535717 PVRIGQ6DKI7 326 aa9.29□□□□□ -0.92
CHD4-203ENST00000535717 WFDC9Q8NEX5 89 aa9.29□□□□□ -0.92
CHD4-203ENST00000535717 DPF1Q92782 380 aa9.29□□□□□ -0.92
CHD4-203ENST00000535717 MISP3Q96FF7 219 aa9.29□□□□□ -0.92
CHD4-203ENST00000535717 OR10C1Q96KK4 312 aa9.29□□□□□ -0.92
CHD4-203ENST00000535717 CCDC140Q96MF4 163 aa9.29□□□□□ -0.92
CHD4-203ENST00000535717 GPN1Q9HCN4 374 aaPredicted RBP9.29□□□□□ -0.92
CHD4-203ENST00000535717 PEF1Q9UBV8 284 aaKnown RBP9.29□□□□□ -0.92
CHD4-203ENST00000535717 FBN3Q75N90 2809 aa9.28□□□□□ -0.92
CHD4-203ENST00000535717 IGHV3-21A0A0B4J1V1 117 aa9.28□□□□□ -0.92
CHD4-203ENST00000535717 SNRPGP15A8MWD9 76 aa9.28□□□□□ -0.92
CHD4-203ENST00000535717 FAM90A26D6RGX4 464 aa9.28□□□□□ -0.92
CHD4-203ENST00000535717 K7EIM0 57 aa9.28□□□□□ -0.92
CHD4-203ENST00000535717 CCSO14618 274 aa9.28□□□□□ -0.92
CHD4-203ENST00000535717 OR8U8P0C7N1 319 aa9.28□□□□□ -0.92
CHD4-203ENST00000535717 SUB1P53999 127 aaKnown RBP eCLIP9.28□□□□□ -0.924e-8■□□□□ 9.9
CHD4-203ENST00000535717 SLURP1P55000 103 aa9.28□□□□□ -0.92
CHD4-203ENST00000535717 IAH1Q2TAA2 248 aaPredicted RBP9.28□□□□□ -0.92
CHD4-203ENST00000535717 ZNF680Q8NEM1 530 aa9.28□□□□□ -0.92
CHD4-203ENST00000535717 OR4D5Q8NGN0 318 aa9.28□□□□□ -0.92
CHD4-203ENST00000535717 ZNF502Q8TBZ5 544 aa9.28□□□□□ -0.92
CHD4-203ENST00000535717 VN1R17PQ8TDU5 208 aa9.28□□□□□ -0.92
CHD4-203ENST00000535717 DTD1Q8TEA8 209 aa9.28□□□□□ -0.92
CHD4-203ENST00000535717 EEF1AKMT3Q96AZ1 226 aa9.28□□□□□ -0.92
CHD4-203ENST00000535717 CXorf58Q96LI9 332 aa9.28□□□□□ -0.92
CHD4-203ENST00000535717 MAGT1Q9H0U3 335 aa9.28□□□□□ -0.92
CHD4-203ENST00000535717 HIPK2Q9H2X6 1198 aa9.28□□□□□ -0.92
CHD4-203ENST00000535717 TRBV7-1A0A0A6YYK4 115 aa9.27□□□□□ -0.93
CHD4-203ENST00000535717 I3L2K1 104 aa9.27□□□□□ -0.93
CHD4-203ENST00000535717 BMPR1BO00238 502 aa9.27□□□□□ -0.93
CHD4-203ENST00000535717 CD33P20138 364 aa9.27□□□□□ -0.93
CHD4-203ENST00000535717 C4BPBP20851 252 aa9.27□□□□□ -0.93
CHD4-203ENST00000535717 HOXD3P31249 432 aaPredicted RBP9.27□□□□□ -0.93
CHD4-203ENST00000535717 CLEC19AQ6UXS0 136 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 423.3 ms