RNA–Protein interactions for RNA: ENST00000535621.6

PDXDC1-205, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene PDXDC1, Length 2,048 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-205ENST00000535621 RCC1LQ96I51 464 aaKnown RBP16.69■□□□□ 0.26
PDXDC1-205ENST00000535621 C7orf69Q9H7B7 122 aa16.69■□□□□ 0.26
PDXDC1-205ENST00000535621 APELAP0DMC3 54 aa16.68■□□□□ 0.26
PDXDC1-205ENST00000535621 TMEM11P17152 192 aa16.68■□□□□ 0.26
PDXDC1-205ENST00000535621 BRS3P32247 399 aa16.68■□□□□ 0.26
PDXDC1-205ENST00000535621 CCL20P78556 96 aa16.68■□□□□ 0.26
PDXDC1-205ENST00000535621 GAMTQ14353 236 aa16.68■□□□□ 0.26
PDXDC1-205ENST00000535621 LINC01356Q8N9X3 169 aa16.68■□□□□ 0.26
PDXDC1-205ENST00000535621 LFNGQ8NES3 379 aa16.68■□□□□ 0.26
PDXDC1-205ENST00000535621 CACNG8Q8WXS5 425 aa16.68■□□□□ 0.26
PDXDC1-205ENST00000535621 SCRT1Q9BWW7 348 aa16.68■□□□□ 0.26
PDXDC1-205ENST00000535621 GGTLC1Q9BX51 225 aa16.68■□□□□ 0.26
PDXDC1-205ENST00000535621 TMEM231Q9H6L2 316 aa16.68■□□□□ 0.26
PDXDC1-205ENST00000535621 FAM96BQ9Y3D0 163 aa16.68■□□□□ 0.26
PDXDC1-205ENST00000535621 SOX21Q9Y651 276 aaPredicted RBP16.68■□□□□ 0.26
PDXDC1-205ENST00000535621 NOTCH2Q04721 2471 aa16.68■□□□□ 0.26
PDXDC1-205ENST00000535621 TRAV1-1A0A0B4J248 108 aa16.67■□□□□ 0.26
PDXDC1-205ENST00000535621 TRAV20A0A0B4J274 112 aa16.67■□□□□ 0.26
PDXDC1-205ENST00000535621 MBP02144 154 aa16.67■□□□□ 0.26
PDXDC1-205ENST00000535621 IGHV4-31P0DP07 118 aa16.67■□□□□ 0.26
PDXDC1-205ENST00000535621 TMEM249Q2WGJ8 235 aa16.67■□□□□ 0.26
PDXDC1-205ENST00000535621 PVRIGQ6DKI7 326 aa16.67■□□□□ 0.26
PDXDC1-205ENST00000535621 SSX7Q7RTT5 188 aa16.67■□□□□ 0.26
PDXDC1-205ENST00000535621 NCBP2LA6PVI3 153 aaKnown RBP16.67■□□□□ 0.26
PDXDC1-205ENST00000535621 CNIH1O95406 144 aa16.67■□□□□ 0.26
PDXDC1-205ENST00000535621 TGFAP01135 160 aa16.67■□□□□ 0.26
PDXDC1-205ENST00000535621 CD5P06127 495 aa16.67■□□□□ 0.26
PDXDC1-205ENST00000535621 IGHV4-38-2P0DP08 117 aa16.67■□□□□ 0.26
PDXDC1-205ENST00000535621 GPX4P36969 197 aaPredicted RBP16.67■□□□□ 0.26
PDXDC1-205ENST00000535621 OPRK1P41145 380 aa16.67■□□□□ 0.26
PDXDC1-205ENST00000535621 BRD3OSQ6XYD6 125 aa16.67■□□□□ 0.26
PDXDC1-205ENST00000535621 TMEM144Q7Z5S9 345 aa16.67■□□□□ 0.26
PDXDC1-205ENST00000535621 MBD3L1Q8WWY6 194 aa16.67■□□□□ 0.26
PDXDC1-205ENST00000535621 NARS2Q96I59 477 aaKnown RBP16.67■□□□□ 0.26
PDXDC1-205ENST00000535621 MYO9AB2RTY4 2548 aa16.67■□□□□ 0.26
PDXDC1-205ENST00000535621 TLN2Q9Y4G6 2542 aa16.66■□□□□ 0.26
PDXDC1-205ENST00000535621 BTBD17A6NE02 478 aa16.66■□□□□ 0.26
PDXDC1-205ENST00000535621 GATA3P23771 443 aa16.66■□□□□ 0.26
PDXDC1-205ENST00000535621 SSMEM1Q8WWF3 244 aa16.66■□□□□ 0.26
PDXDC1-205ENST00000535621 SRSF8Q9BRL6 282 aaKnown RBP16.66■□□□□ 0.26
PDXDC1-205ENST00000535621 FNDC4Q9H6D8 234 aaPredicted RBP16.66■□□□□ 0.26
PDXDC1-205ENST00000535621 IGKV1OR2-108A0A075B7D4 117 aa16.65■□□□□ 0.26
PDXDC1-205ENST00000535621 TMEM218A2RU14 115 aa16.65■□□□□ 0.26
PDXDC1-205ENST00000535621 SOX15O60248 233 aa16.65■□□□□ 0.26
PDXDC1-205ENST00000535621 MFAP2P55001 183 aa16.65■□□□□ 0.26
PDXDC1-205ENST00000535621 SLC16A13Q7RTY0 426 aa16.65■□□□□ 0.26
PDXDC1-205ENST00000535621 OR10G4Q8NGN3 311 aa16.65■□□□□ 0.26
PDXDC1-205ENST00000535621 OR10G9Q8NGN4 311 aa16.65■□□□□ 0.26
PDXDC1-205ENST00000535621 OR10G7Q8NGN6 311 aa16.65■□□□□ 0.26
PDXDC1-205ENST00000535621 TREM1Q9NP99 234 aa16.65■□□□□ 0.26
PDXDC1-205ENST00000535621 M6PRP20645 277 aa16.65■□□□□ 0.26
PDXDC1-205ENST00000535621 FXYD3Q14802 87 aa16.65■□□□□ 0.26
PDXDC1-205ENST00000535621 C19orf35Q6ZS72 473 aa16.65■□□□□ 0.26
PDXDC1-205ENST00000535621 OR1P1Q8NH06 330 aa16.65■□□□□ 0.26
PDXDC1-205ENST00000535621 HBE1P02100 147 aa16.64■□□□□ 0.25
PDXDC1-205ENST00000535621 GUK1Q16774 197 aa16.64■□□□□ 0.25
PDXDC1-205ENST00000535621 MIC13Q5XKP0 118 aa16.64■□□□□ 0.25
PDXDC1-205ENST00000535621 OR2T6Q8NHC8 308 aa16.64■□□□□ 0.25
PDXDC1-205ENST00000535621 PXMP4Q9Y6I8 212 aa16.64■□□□□ 0.25
PDXDC1-205ENST00000535621 ACANP16112 2415 aa16.64■□□□□ 0.25
PDXDC1-205ENST00000535621 SMAD7O15105 426 aaKnown RBP16.63■□□□□ 0.25
PDXDC1-205ENST00000535621 RAB31Q13636 194 aa16.63■□□□□ 0.25
PDXDC1-205ENST00000535621 ACOT6Q3I5F7 207 aaPredicted RBP16.63■□□□□ 0.25
PDXDC1-205ENST00000535621 LCN15Q6UWW0 184 aa16.63■□□□□ 0.25
PDXDC1-205ENST00000535621 ZNF562Q6V9R5 426 aa16.63■□□□□ 0.25
PDXDC1-205ENST00000535621 F11RQ9Y624 299 aaKnown RBP16.63■□□□□ 0.25
PDXDC1-205ENST00000535621 C9JQL5 133 aa16.63■□□□□ 0.25
PDXDC1-205ENST00000535621 YIF1AO95070 293 aa16.63■□□□□ 0.25
PDXDC1-205ENST00000535621 GCSAMLQ5JQS6 135 aa16.63■□□□□ 0.25
PDXDC1-205ENST00000535621 KLF17Q5JT82 389 aaPredicted RBP16.63■□□□□ 0.25
PDXDC1-205ENST00000535621 Q8N9W7 124 aa16.63■□□□□ 0.25
PDXDC1-205ENST00000535621 KCNIP2Q9NS61 270 aa16.63■□□□□ 0.25
PDXDC1-205ENST00000535621 C1RLQ9NZP8 487 aa16.63■□□□□ 0.25
PDXDC1-205ENST00000535621 A0A0U1RQK1 487 aa16.62■□□□□ 0.25
PDXDC1-205ENST00000535621 RPL29P47914 159 aaKnown RBP16.62■□□□□ 0.25
PDXDC1-205ENST00000535621 CX3CL1P78423 397 aa16.62■□□□□ 0.25
PDXDC1-205ENST00000535621 SLC35E1Q96K37 410 aa16.62■□□□□ 0.25
PDXDC1-205ENST00000535621 EIF5A2Q9GZV4 153 aaKnown RBP16.62■□□□□ 0.25
PDXDC1-205ENST00000535621 SLC39A9Q9NUM3 307 aa16.62■□□□□ 0.25
PDXDC1-205ENST00000535621 DMRT1Q9Y5R6 373 aa16.62■□□□□ 0.25
PDXDC1-205ENST00000535621 MAP1LC3B2A6NCE7 125 aa16.62■□□□□ 0.25
PDXDC1-205ENST00000535621 EIF3GO75821 320 aaKnown RBP eCLIP16.62■□□□□ 0.25
PDXDC1-205ENST00000535621 DEFA4P12838 97 aa16.62■□□□□ 0.25
PDXDC1-205ENST00000535621 ADCYAP1P18509 176 aa16.62■□□□□ 0.25
PDXDC1-205ENST00000535621 STPG3Q8N7X2 389 aa16.62■□□□□ 0.25
PDXDC1-205ENST00000535621 FOXC2Q99958 501 aa16.62■□□□□ 0.25
PDXDC1-205ENST00000535621 FAM103A1Q9BTL3 118 aaKnown RBP16.62■□□□□ 0.25
PDXDC1-205ENST00000535621 PBDC1Q9BVG4 233 aa16.62■□□□□ 0.25
PDXDC1-205ENST00000535621 MAP1LC3BQ9GZQ8 125 aa16.62■□□□□ 0.25
PDXDC1-205ENST00000535621 MEGF9Q9H1U4 602 aa16.62■□□□□ 0.25
PDXDC1-205ENST00000535621 SLC25A22Q9H936 323 aa16.62■□□□□ 0.25
PDXDC1-205ENST00000535621 CTXND1A0A1B0GTU2 59 aa16.61■□□□□ 0.25
PDXDC1-205ENST00000535621 FGF8P55075 233 aaPredicted RBP16.61■□□□□ 0.25
PDXDC1-205ENST00000535621 B2MP61769 119 aa16.61■□□□□ 0.25
PDXDC1-205ENST00000535621 PRR20EP86478 221 aa16.61■□□□□ 0.25
PDXDC1-205ENST00000535621 PRR20CP86479 221 aa16.61■□□□□ 0.25
PDXDC1-205ENST00000535621 PRR20DP86480 221 aa16.61■□□□□ 0.25
PDXDC1-205ENST00000535621 PRR20BP86481 221 aa16.61■□□□□ 0.25
PDXDC1-205ENST00000535621 PRR20AP86496 221 aa16.61■□□□□ 0.25
PDXDC1-205ENST00000535621 ABHD5Q8WTS1 349 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms