RNA–Protein interactions for RNA: ENST00000535236.5

SFSWAP-203, Transcript of splicing factor SWAP, humanhuman

TSL 1 (best)

Gene SFSWAP, Length 5,593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-203ENST00000535236 TRAV40A0A0B4J280 105 aa15.18■□□□□ 0.02
SFSWAP-203ENST00000535236 DSCR9P59020 149 aa15.18■□□□□ 0.02
SFSWAP-203ENST00000535236 TRBV6-7A0A0A0MS04 114 aa15.18■□□□□ 0.02
SFSWAP-203ENST00000535236 LINC00114Q6XXX2 140 aa15.18■□□□□ 0.02
SFSWAP-203ENST00000535236 BEND2Q8NDZ0 799 aa15.18■□□□□ 0.02
SFSWAP-203ENST00000535236 DPH3P1Q9H4G8 78 aa15.18■□□□□ 0.02
SFSWAP-203ENST00000535236 SPTA1P02549 2419 aa15.18■□□□□ 0.02
SFSWAP-203ENST00000535236 IGKV3D-20A0A0C4DH25 116 aa15.17■□□□□ 0.02
SFSWAP-203ENST00000535236 IGHV1-18A0A0C4DH31 117 aa15.17■□□□□ 0.02
SFSWAP-203ENST00000535236 NDUFA3O95167 84 aa15.17■□□□□ 0.02
SFSWAP-203ENST00000535236 ZNF646O15015 1829 aaPredicted RBP15.17■□□□□ 0.02
SFSWAP-203ENST00000535236 A0A1B0GTI1 187 aa15.17■□□□□ 0.02
SFSWAP-203ENST00000535236 C15orf61A6NNL5 157 aa15.17■□□□□ 0.02
SFSWAP-203ENST00000535236 MORN2Q502X0 79 aa15.17■□□□□ 0.02
SFSWAP-203ENST00000535236 VGLL1Q99990 258 aa15.17■□□□□ 0.02
SFSWAP-203ENST00000535236 C10orf126Q8N4M7 172 aa15.17■□□□□ 0.02
SFSWAP-203ENST00000535236 SDHCQ99643 169 aaPredicted RBP15.17■□□□□ 0.02
SFSWAP-203ENST00000535236 SPRR3Q9UBC9 169 aa15.17■□□□□ 0.02
SFSWAP-203ENST00000535236 STRCP1A6NGW2 1772 aa15.17■□□□□ 0.02
SFSWAP-203ENST00000535236 C3orf36Q3SXR2 165 aa15.17■□□□□ 0.02
SFSWAP-203ENST00000535236 IFI27P40305 119 aaPredicted RBP15.17■□□□□ 0.02
SFSWAP-203ENST00000535236 IMMP2LQ96T52 175 aa15.17■□□□□ 0.02
SFSWAP-203ENST00000535236 DEPPQ9NTK1 212 aa15.17■□□□□ 0.02
SFSWAP-203ENST00000535236 IZUMO1RA6ND01 250 aa15.16■□□□□ 0.02
SFSWAP-203ENST00000535236 VCX2Q9H322 139 aa15.16■□□□□ 0.02
SFSWAP-203ENST00000535236 SLC25A20O43772 301 aa15.16■□□□□ 0.02
SFSWAP-203ENST00000535236 ZNF525Q8N782 197 aa15.16■□□□□ 0.02
SFSWAP-203ENST00000535236 COL5A3P25940 1745 aaPredicted RBP15.16■□□□□ 0.02
SFSWAP-203ENST00000535236 TRAV21A0A0B4J279 112 aa15.16■□□□□ 0.02
SFSWAP-203ENST00000535236 DTX2Q86UW9 622 aa15.16■□□□□ 0.02
SFSWAP-203ENST00000535236 KIF13BQ9NQT8 1826 aa15.16■□□□□ 0.02
SFSWAP-203ENST00000535236 OR9G9P0C7N8 305 aa15.16■□□□□ 0.02
SFSWAP-203ENST00000535236 TIMM23O14925 209 aa15.15■□□□□ 0.02
SFSWAP-203ENST00000535236 GHRHP01286 108 aa15.15■□□□□ 0.02
SFSWAP-203ENST00000535236 TBL2Q9Y4P3 447 aaKnown RBP15.15■□□□□ 0.02
SFSWAP-203ENST00000535236 CSRP3P50461 194 aa15.15■□□□□ 0.02
SFSWAP-203ENST00000535236 GNG5P63218 68 aa15.15■□□□□ 0.02
SFSWAP-203ENST00000535236 ZFP36L1Q07352 338 aaKnown RBP15.15■□□□□ 0.02
SFSWAP-203ENST00000535236 FBLN7Q53RD9 439 aa15.15■□□□□ 0.02
SFSWAP-203ENST00000535236 PEF1Q9UBV8 284 aaKnown RBP15.15■□□□□ 0.02
SFSWAP-203ENST00000535236 ARFGEF1Q9Y6D6 1849 aa15.15■□□□□ 0.02
SFSWAP-203ENST00000535236 ERVH48-1M5A8F1 160 aa15.15■□□□□ 0.02
SFSWAP-203ENST00000535236 LINC00271P0C7V0 271 aa15.15■□□□□ 0.02
SFSWAP-203ENST00000535236 ZNF497Q6ZNH5 498 aa15.15■□□□□ 0.02
SFSWAP-203ENST00000535236 ADAMTS7Q9UKP4 1686 aa15.15■□□□□ 0.02
SFSWAP-203ENST00000535236 TRGV11A0A075B6L2 103 aa15.14■□□□□ 0.01
SFSWAP-203ENST00000535236 ZNF585BQ52M93 769 aa15.14■□□□□ 0.01
SFSWAP-203ENST00000535236 KIR3DL3Q8N743 410 aa15.14■□□□□ 0.01
SFSWAP-203ENST00000535236 TFF1P04155 84 aa15.14■□□□□ 0.01
SFSWAP-203ENST00000535236 UBE2DNLQ8IWF7 75 aa15.14■□□□□ 0.01
SFSWAP-203ENST00000535236 SNAI2O43623 268 aa15.14■□□□□ 0.01
SFSWAP-203ENST00000535236 SRP19P09132 144 aaKnown RBP15.14■□□□□ 0.01
SFSWAP-203ENST00000535236 LAIR2Q6ISS4 152 aa15.14■□□□□ 0.01
SFSWAP-203ENST00000535236 SHISA3A0PJX4 238 aa15.14■□□□□ 0.01
SFSWAP-203ENST00000535236 HIGD1CA8MV81 97 aa15.14■□□□□ 0.01
SFSWAP-203ENST00000535236 EFNB1P98172 346 aa15.14■□□□□ 0.01
SFSWAP-203ENST00000535236 APOMO95445 188 aa15.13■□□□□ 0.01
SFSWAP-203ENST00000535236 IGFBP3P17936 291 aaPredicted RBP15.13■□□□□ 0.01
SFSWAP-203ENST00000535236 PAX8Q06710 450 aa15.13■□□□□ 0.01
SFSWAP-203ENST00000535236 COL4A1P02462 1669 aa15.13■□□□□ 0.01
SFSWAP-203ENST00000535236 IGHV1-46P01743 117 aa15.13■□□□□ 0.01
SFSWAP-203ENST00000535236 TRAV9-1A0A075B6T8 112 aa15.13■□□□□ 0.01
SFSWAP-203ENST00000535236 PINLYPA6NC86 204 aa15.12■□□□□ 0.01
SFSWAP-203ENST00000535236 STAG3L3P0CL85 134 aa15.12■□□□□ 0.01
SFSWAP-203ENST00000535236 CD59P13987 128 aa15.12■□□□□ 0.01
SFSWAP-203ENST00000535236 CFHR1Q03591 330 aa15.12■□□□□ 0.01
SFSWAP-203ENST00000535236 ZNF324BQ6AW86 544 aaPredicted RBP15.12■□□□□ 0.01
SFSWAP-203ENST00000535236 ZNF415Q09FC8 603 aa15.12■□□□□ 0.01
SFSWAP-203ENST00000535236 CKAP5Q14008 2032 aa15.12■□□□□ 0.01
SFSWAP-203ENST00000535236 LDLRAD4O15165 306 aa15.12■□□□□ 0.01
SFSWAP-203ENST00000535236 PSMG4Q5JS54 123 aa15.12■□□□□ 0.01
SFSWAP-203ENST00000535236 IGLV3-32A0A0A0MS00 114 aa15.12■□□□□ 0.01
SFSWAP-203ENST00000535236 TRAV41A0A0B4J266 112 aa15.12■□□□□ 0.01
SFSWAP-203ENST00000535236 SAP30O75446 220 aa15.12■□□□□ 0.01
SFSWAP-203ENST00000535236 ZNF318Q5VUA4 2279 aa15.12■□□□□ 0.01
SFSWAP-203ENST00000535236 MPTX1A8MV57 137 aa15.11■□□□□ 0.01
SFSWAP-203ENST00000535236 NAT1P18440 290 aa15.11■□□□□ 0.01
SFSWAP-203ENST00000535236 TNFRSF14Q92956 283 aa15.11■□□□□ 0.01
SFSWAP-203ENST00000535236 NXT2Q9NPJ8 142 aaKnown RBP15.11■□□□□ 0.01
SFSWAP-203ENST00000535236 IGKV1D-13A0A0B4J2D9 117 aa15.11■□□□□ 0.01
SFSWAP-203ENST00000535236 IGKV1-13P0DP09 117 aa15.11■□□□□ 0.01
SFSWAP-203ENST00000535236 CTAG1AP78358 180 aa15.11■□□□□ 0.01
SFSWAP-203ENST00000535236 C18orf12Q96KH6 178 aa15.11■□□□□ 0.01
SFSWAP-203ENST00000535236 LYZL4Q96KX0 146 aa15.11■□□□□ 0.01
SFSWAP-203ENST00000535236 C14orf144Q96I85 54 aa15.11■□□□□ 0.01
SFSWAP-203ENST00000535236 EFNA4P52798 201 aa15.11■□□□□ 0.01
SFSWAP-203ENST00000535236 CMC4P56277 68 aaPredicted RBP15.11■□□□□ 0.01
SFSWAP-203ENST00000535236 ZNF672Q499Z4 452 aaPredicted RBP15.11■□□□□ 0.01
SFSWAP-203ENST00000535236 OR9G4Q8NGQ1 327 aa15.11■□□□□ 0.01
SFSWAP-203ENST00000535236 SLC25A28Q96A46 364 aa15.11■□□□□ 0.01
SFSWAP-203ENST00000535236 LINC00527Q9UJ94 153 aa15.11■□□□□ 0.01
SFSWAP-203ENST00000535236 COL11A1P12107 1806 aaPredicted RBP15.11■□□□□ 0.01
SFSWAP-203ENST00000535236 EPDR1Q9UM22 224 aa15.11■□□□□ 0.01
SFSWAP-203ENST00000535236 CHCHD5Q9BSY4 110 aa15.1■□□□□ 0.01
SFSWAP-203ENST00000535236 SRD5A1P18405 259 aa15.1■□□□□ 0.01
SFSWAP-203ENST00000535236 OVOL1O14753 267 aa15.1■□□□□ 0.01
SFSWAP-203ENST00000535236 RAMP3O60896 148 aa15.1■□□□□ 0.01
SFSWAP-203ENST00000535236 ZNF688P0C7X2 276 aa15.1■□□□□ 0.01
SFSWAP-203ENST00000535236 PRCDQ00LT1 54 aa15.1■□□□□ 0.01
SFSWAP-203ENST00000535236 SIGLEC15Q6ZMC9 328 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms