RNA–Protein interactions for RNA: ENST00000534716.2

NDUFS3-213, Transcript of NADH:ubiquinone oxidoreductase core subunit S3, humanhuman

TSL 2 BASIC

Gene NDUFS3, Length 1,263 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS3-213ENST00000534716 A0A0B4J293 547 aa13.96□□□□□ -0.17
NDUFS3-213ENST00000534716 CHEK1O14757 476 aa13.96□□□□□ -0.17
NDUFS3-213ENST00000534716 JTBO76095 146 aa13.96□□□□□ -0.17
NDUFS3-213ENST00000534716 ATG12O94817 140 aa13.96□□□□□ -0.17
NDUFS3-213ENST00000534716 CTSDP07339 412 aaPredicted RBP13.96□□□□□ -0.17
NDUFS3-213ENST00000534716 PGAM2P15259 253 aa13.96□□□□□ -0.17
NDUFS3-213ENST00000534716 TERB2Q8NHR7 220 aa13.96□□□□□ -0.17
NDUFS3-213ENST00000534716 UBQLN2Q9UHD9 624 aa13.96□□□□□ -0.17
NDUFS3-213ENST00000534716 C3orf85A0A1B0GTC6 90 aa13.95□□□□□ -0.18
NDUFS3-213ENST00000534716 ZNF207O43670 478 aaKnown RBP13.95□□□□□ -0.18
NDUFS3-213ENST00000534716 B3GALNT1O75752 331 aa13.95□□□□□ -0.18
NDUFS3-213ENST00000534716 PI3P19957 117 aa13.95□□□□□ -0.18
NDUFS3-213ENST00000534716 BMI1P35226 326 aa13.95□□□□□ -0.18
NDUFS3-213ENST00000534716 GPR107Q5VW38 600 aa13.95□□□□□ -0.18
NDUFS3-213ENST00000534716 TMEM229BQ8NBD8 167 aa13.95□□□□□ -0.18
NDUFS3-213ENST00000534716 TMEM116Q8NCL8 245 aa13.95□□□□□ -0.18
NDUFS3-213ENST00000534716 ZFAND1Q8TCF1 268 aa13.95□□□□□ -0.18
NDUFS3-213ENST00000534716 RNF2Q99496 336 aa13.95□□□□□ -0.18
NDUFS3-213ENST00000534716 RHPN1-AS1Q9BWJ2 59 aa13.95□□□□□ -0.18
NDUFS3-213ENST00000534716 TRAV14DV4A0A0A6YYC5 116 aa13.94□□□□□ -0.18
NDUFS3-213ENST00000534716 ATF4P18848 351 aaPredicted RBP13.94□□□□□ -0.18
NDUFS3-213ENST00000534716 CMC4P56277 68 aaPredicted RBP13.94□□□□□ -0.18
NDUFS3-213ENST00000534716 SSBP1Q04837 148 aaKnown RBP13.94□□□□□ -0.18
NDUFS3-213ENST00000534716 TNFRSF9Q07011 255 aa13.94□□□□□ -0.18
NDUFS3-213ENST00000534716 IZUMO4Q1ZYL8 232 aa13.94□□□□□ -0.18
NDUFS3-213ENST00000534716 RNASE12Q5GAN4 147 aaKnown RBP13.94□□□□□ -0.18
NDUFS3-213ENST00000534716 FAM90A2PQ658T7 463 aa13.94□□□□□ -0.18
NDUFS3-213ENST00000534716 GALNT14Q96FL9 552 aa13.94□□□□□ -0.18
NDUFS3-213ENST00000534716 GABARAPH6UMI1 98 aa13.93□□□□□ -0.18
NDUFS3-213ENST00000534716 SPRY2O43597 315 aa13.93□□□□□ -0.18
NDUFS3-213ENST00000534716 GNG7O60262 68 aa13.93□□□□□ -0.18
NDUFS3-213ENST00000534716 YIF1AO95070 293 aa13.93□□□□□ -0.18
NDUFS3-213ENST00000534716 CD5P06127 495 aa13.93□□□□□ -0.18
NDUFS3-213ENST00000534716 UCP1P25874 307 aa13.93□□□□□ -0.18
NDUFS3-213ENST00000534716 NPBWR1P48145 328 aa13.93□□□□□ -0.18
NDUFS3-213ENST00000534716 TAS2R19P59542 299 aa13.93□□□□□ -0.18
NDUFS3-213ENST00000534716 MRPS10P82664 201 aaKnown RBP13.93□□□□□ -0.18
NDUFS3-213ENST00000534716 CCDC71LQ8N9Z2 235 aa13.93□□□□□ -0.18
NDUFS3-213ENST00000534716 OR4D10Q8NGI6 311 aa13.93□□□□□ -0.18
NDUFS3-213ENST00000534716 RNF183Q96D59 192 aa13.93□□□□□ -0.18
NDUFS3-213ENST00000534716 MIXL1Q9H2W2 232 aa13.93□□□□□ -0.18
NDUFS3-213ENST00000534716 ST8SIA3O43173 380 aa13.92□□□□□ -0.18
NDUFS3-213ENST00000534716 SNCAP37840 140 aa13.92□□□□□ -0.18
NDUFS3-213ENST00000534716 AKR1C2P52895 323 aa13.92□□□□□ -0.18
NDUFS3-213ENST00000534716 AARDQ4LEZ3 155 aa13.92□□□□□ -0.18
NDUFS3-213ENST00000534716 STPG3Q8N7X2 389 aa13.92□□□□□ -0.18
NDUFS3-213ENST00000534716 DUSP18Q8NEJ0 188 aa13.92□□□□□ -0.18
NDUFS3-213ENST00000534716 OR13C8Q8NGS7 320 aa13.92□□□□□ -0.18
NDUFS3-213ENST00000534716 PINX1Q96BK5 328 aaKnown RBP13.92□□□□□ -0.18
NDUFS3-213ENST00000534716 MAP6D1Q9H9H5 199 aa13.92□□□□□ -0.18
NDUFS3-213ENST00000534716 COPZ2Q9P299 210 aa13.92□□□□□ -0.18
NDUFS3-213ENST00000534716 CORTO00230 105 aa13.91□□□□□ -0.18
NDUFS3-213ENST00000534716 RAB3DO95716 219 aa13.91□□□□□ -0.18
NDUFS3-213ENST00000534716 IGHV3-48P01763 117 aa13.91□□□□□ -0.18
NDUFS3-213ENST00000534716 ALDH3B2P48448 385 aa13.91□□□□□ -0.18
NDUFS3-213ENST00000534716 PPP5CP53041 499 aa13.91□□□□□ -0.18
NDUFS3-213ENST00000534716 DEFB135Q30KP9 77 aa13.91□□□□□ -0.18
NDUFS3-213ENST00000534716 SPINK9Q5DT21 86 aa13.91□□□□□ -0.18
NDUFS3-213ENST00000534716 STEAP1BQ6NZ63 245 aa13.91□□□□□ -0.18
NDUFS3-213ENST00000534716 TOMM20LQ6UXN7 152 aa13.91□□□□□ -0.18
NDUFS3-213ENST00000534716 SLC35G3Q8N808 338 aa13.91□□□□□ -0.18
NDUFS3-213ENST00000534716 GINS3Q9BRX5 216 aa13.91□□□□□ -0.18
NDUFS3-213ENST00000534716 MRPS26Q9BYN8 205 aaKnown RBP13.91□□□□□ -0.18
NDUFS3-213ENST00000534716 VSIRQ9H7M9 311 aa13.91□□□□□ -0.18
NDUFS3-213ENST00000534716 A0A0J9YWU9 116 aa13.9□□□□□ -0.18
NDUFS3-213ENST00000534716 TMEM50AO95807 157 aa13.9□□□□□ -0.18
NDUFS3-213ENST00000534716 IFNA17P01571 189 aa13.9□□□□□ -0.18
NDUFS3-213ENST00000534716 RNASE2P10153 161 aaKnown RBP13.9□□□□□ -0.18
NDUFS3-213ENST00000534716 SUB1P53999 127 aaKnown RBP eCLIP13.9□□□□□ -0.18
NDUFS3-213ENST00000534716 MEF2DQ14814 521 aa13.9□□□□□ -0.18
NDUFS3-213ENST00000534716 TRIM16LQ309B1 348 aa13.9□□□□□ -0.18
NDUFS3-213ENST00000534716 BSXQ3C1V8 233 aa13.9□□□□□ -0.18
NDUFS3-213ENST00000534716 SP6Q3SY56 376 aa13.9□□□□□ -0.18
NDUFS3-213ENST00000534716 ZNF600Q6ZNG1 722 aa13.9□□□□□ -0.18
NDUFS3-213ENST00000534716 LYG2Q86SG7 212 aa13.9□□□□□ -0.18
NDUFS3-213ENST00000534716 FAM219AQ8IW50 185 aa13.9□□□□□ -0.18
NDUFS3-213ENST00000534716 RRNAD1Q96FB5 475 aaKnown RBP13.9□□□□□ -0.18
NDUFS3-213ENST00000534716 PDCD10Q9BUL8 212 aa13.9□□□□□ -0.18
NDUFS3-213ENST00000534716 C6orf62Q9GZU0 229 aaPredicted RBP13.9□□□□□ -0.18
NDUFS3-213ENST00000534716 CDS2O95674 445 aa13.89□□□□□ -0.19
NDUFS3-213ENST00000534716 RPL5P46777 297 aaKnown RBP13.89□□□□□ -0.19
NDUFS3-213ENST00000534716 SURF2Q15527 256 aaPredicted RBP13.89□□□□□ -0.19
NDUFS3-213ENST00000534716 SCGB2B2Q4G0G5 96 aa13.89□□□□□ -0.19
NDUFS3-213ENST00000534716 MARCH1Q8TCQ1 289 aa13.89□□□□□ -0.19
NDUFS3-213ENST00000534716 TMEM222Q9H0R3 208 aa13.89□□□□□ -0.19
NDUFS3-213ENST00000534716 ZFAND3Q9H8U3 227 aa13.89□□□□□ -0.19
NDUFS3-213ENST00000534716 IGHV3-49A0A0A0MS15 119 aa13.88□□□□□ -0.19
NDUFS3-213ENST00000534716 A0A0G2JRQ6 117 aa13.88□□□□□ -0.19
NDUFS3-213ENST00000534716 CTDSP2O14595 271 aa13.88□□□□□ -0.19
NDUFS3-213ENST00000534716 CTDSPLO15194 276 aa13.88□□□□□ -0.19
NDUFS3-213ENST00000534716 ETV6P41212 452 aa13.88□□□□□ -0.19
NDUFS3-213ENST00000534716 PAFAH1B2P68402 229 aa13.88□□□□□ -0.19
NDUFS3-213ENST00000534716 EWSR1Q01844 656 aaKnown RBP eCLIP13.88□□□□□ -0.19
NDUFS3-213ENST00000534716 Q6ZRM9 215 aa13.88□□□□□ -0.19
NDUFS3-213ENST00000534716 GPR141Q7Z602 305 aa13.88□□□□□ -0.19
NDUFS3-213ENST00000534716 APRG1Q8IVJ8 170 aa13.88□□□□□ -0.19
NDUFS3-213ENST00000534716 OR52E5Q8NH55 327 aa13.88□□□□□ -0.19
NDUFS3-213ENST00000534716 SMIM4Q8WVI0 70 aa13.88□□□□□ -0.19
NDUFS3-213ENST00000534716 RTBDNQ9BSG5 229 aaPredicted RBP13.88□□□□□ -0.19
NDUFS3-213ENST00000534716 RABL2AQ9UBK7 228 aaPredicted RBP13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms