RNA–Protein interactions for RNA: ENST00000534553.5

BEST1-208, Transcript of bestrophin 1, humanhuman

TSL 2 BASIC

Gene BEST1, Length 1,829 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-208ENST00000534553 CFAP46Q8IYW2 2715 aa10.73□□□□□ -0.69
BEST1-208ENST00000534553 LRBAP50851 2863 aa10.73□□□□□ -0.69
BEST1-208ENST00000534553 A0A087WWC5 75 aa10.72□□□□□ -0.69
BEST1-208ENST00000534553 NUPL2O15504 423 aaKnown RBP10.72□□□□□ -0.69
BEST1-208ENST00000534553 FBP1P09467 338 aa10.72□□□□□ -0.69
BEST1-208ENST00000534553 TAS2R45P59539 299 aa10.72□□□□□ -0.69
BEST1-208ENST00000534553 PRB3Q04118 309 aaPredicted RBP10.72□□□□□ -0.69
BEST1-208ENST00000534553 KLRD1Q13241 179 aa10.72□□□□□ -0.69
BEST1-208ENST00000534553 EBI3Q14213 229 aa10.72□□□□□ -0.69
BEST1-208ENST00000534553 FAM90A2PQ658T7 463 aa10.72□□□□□ -0.69
BEST1-208ENST00000534553 TMEM88Q6PEY1 159 aa10.72□□□□□ -0.69
BEST1-208ENST00000534553 CBLN2Q8IUK8 224 aa10.72□□□□□ -0.69
BEST1-208ENST00000534553 ZNF843Q8N446 348 aa10.72□□□□□ -0.69
BEST1-208ENST00000534553 C15orf54Q8N8G6 183 aa10.72□□□□□ -0.69
BEST1-208ENST00000534553 THAP8Q8NA92 274 aa10.72□□□□□ -0.69
BEST1-208ENST00000534553 SRSF12Q8WXF0 261 aaKnown RBP10.72□□□□□ -0.69
BEST1-208ENST00000534553 FBXL15Q9H469 300 aa10.72□□□□□ -0.69
BEST1-208ENST00000534553 F11RQ9Y624 299 aaKnown RBP10.72□□□□□ -0.69
BEST1-208ENST00000534553 USP24Q9UPU5 2620 aa10.72□□□□□ -0.69
BEST1-208ENST00000534553 TNCP24821 2201 aa10.72□□□□□ -0.69
BEST1-208ENST00000534553 CNTFRP26992 372 aa10.72□□□□□ -0.69
BEST1-208ENST00000534553 OR10J1P30954 320 aa10.72□□□□□ -0.69
BEST1-208ENST00000534553 CEBPGP53567 150 aa10.72□□□□□ -0.69
BEST1-208ENST00000534553 DSCR9P59020 149 aa10.72□□□□□ -0.69
BEST1-208ENST00000534553 CD81P60033 236 aa10.72□□□□□ -0.69
BEST1-208ENST00000534553 GCSAMLQ5JQS6 135 aa10.72□□□□□ -0.69
BEST1-208ENST00000534553 LDLRAD2Q5SZI1 272 aa10.72□□□□□ -0.69
BEST1-208ENST00000534553 SPNS3Q6ZMD2 512 aa10.72□□□□□ -0.69
BEST1-208ENST00000534553 IQCF2Q8IXL9 164 aa10.72□□□□□ -0.69
BEST1-208ENST00000534553 GATAD1Q8WUU5 269 aa10.72□□□□□ -0.69
BEST1-208ENST00000534553 EAF1Q96JC9 268 aaPredicted RBP10.72□□□□□ -0.69
BEST1-208ENST00000534553 PFDN5Q99471 154 aa10.72□□□□□ -0.69
BEST1-208ENST00000534553 MRPL32Q9BYC8 188 aaKnown RBP10.72□□□□□ -0.69
BEST1-208ENST00000534553 FUT9Q9Y231 359 aa10.72□□□□□ -0.69
BEST1-208ENST00000534553 TEX22C9J3V5 150 aa10.71□□□□□ -0.69
BEST1-208ENST00000534553 HMGB3O15347 200 aaKnown RBP10.71□□□□□ -0.69
BEST1-208ENST00000534553 CLN5O75503 358 aa10.71□□□□□ -0.69
BEST1-208ENST00000534553 CRYGCP07315 174 aa10.71□□□□□ -0.69
BEST1-208ENST00000534553 LINC00869P0C866 280 aa10.71□□□□□ -0.69
BEST1-208ENST00000534553 GNB1P62873 340 aa10.71□□□□□ -0.69
BEST1-208ENST00000534553 CYP2G1PQ6ZSU1 146 aa10.71□□□□□ -0.69
BEST1-208ENST00000534553 LHFPL4Q7Z7J7 247 aa10.71□□□□□ -0.69
BEST1-208ENST00000534553 C10orf105Q8TEF2 133 aa10.71□□□□□ -0.69
BEST1-208ENST00000534553 ACY3Q96HD9 319 aa10.71□□□□□ -0.69
BEST1-208ENST00000534553 TMEM167BQ9NRX6 74 aa10.71□□□□□ -0.69
BEST1-208ENST00000534553 IGKV1OR2-108A0A075B7D4 117 aa10.7□□□□□ -0.7
BEST1-208ENST00000534553 TCRBV4S1A1TA0A5B7 111 aa10.7□□□□□ -0.7
BEST1-208ENST00000534553 F6UZH7 168 aa10.7□□□□□ -0.7
BEST1-208ENST00000534553 CNIH1O95406 144 aa10.7□□□□□ -0.7
BEST1-208ENST00000534553 ARL14EPLP0DKL9 152 aa10.7□□□□□ -0.7
BEST1-208ENST00000534553 PAX1P15863 534 aa10.7□□□□□ -0.7
BEST1-208ENST00000534553 BRS3P32247 399 aa10.7□□□□□ -0.7
BEST1-208ENST00000534553 BPIFB3P59826 476 aa10.7□□□□□ -0.7
BEST1-208ENST00000534553 SSX2Q16385 188 aa10.7□□□□□ -0.7
BEST1-208ENST00000534553 C5orf64Q2M2E5 130 aa10.7□□□□□ -0.7
BEST1-208ENST00000534553 PQLC2Q6ZP29 291 aa10.7□□□□□ -0.7
BEST1-208ENST00000534553 TMEM116Q8NCL8 245 aa10.7□□□□□ -0.7
BEST1-208ENST00000534553 OR1L4Q8NGR5 311 aa10.7□□□□□ -0.7
BEST1-208ENST00000534553 ABHD5Q8WTS1 349 aa10.7□□□□□ -0.7
BEST1-208ENST00000534553 BBC3Q96PG8 261 aaPredicted RBP10.7□□□□□ -0.7
BEST1-208ENST00000534553 TBX15Q96SF7 602 aa10.7□□□□□ -0.7
BEST1-208ENST00000534553 TMPRSS5Q9H3S3 457 aa10.7□□□□□ -0.7
BEST1-208ENST00000534553 TECRQ9NZ01 308 aaKnown RBP10.7□□□□□ -0.7
BEST1-208ENST00000534553 C1RLQ9NZP8 487 aa10.7□□□□□ -0.7
BEST1-208ENST00000534553 CXorf65A6NEN9 183 aa10.7□□□□□ -0.7
BEST1-208ENST00000534553 VWC2LB2RUY7 222 aa10.7□□□□□ -0.7
BEST1-208ENST00000534553 C11orf94C9JXX5 98 aa10.7□□□□□ -0.7
BEST1-208ENST00000534553 PAGE4O60829 102 aa10.7□□□□□ -0.7
BEST1-208ENST00000534553 OR5G3P0C626 314 aa10.7□□□□□ -0.7
BEST1-208ENST00000534553 FAM106CPP0CH98 169 aa10.7□□□□□ -0.7
BEST1-208ENST00000534553 ATP5J2P56134 94 aa10.7□□□□□ -0.7
BEST1-208ENST00000534553 HES1Q14469 280 aa10.7□□□□□ -0.7
BEST1-208ENST00000534553 FAM78BQ5VT40 261 aa10.7□□□□□ -0.7
BEST1-208ENST00000534553 OR4F5Q8NH21 305 aa10.7□□□□□ -0.7
BEST1-208ENST00000534553 OR4F4Q96R69 305 aa10.7□□□□□ -0.7
BEST1-208ENST00000534553 FNDC4Q9H6D8 234 aaPredicted RBP10.7□□□□□ -0.7
BEST1-208ENST00000534553 NAT8Q9UHE5 227 aa10.7□□□□□ -0.7
BEST1-208ENST00000534553 ZNF727A8MUV8 499 aa10.69□□□□□ -0.7
BEST1-208ENST00000534553 PRB1P04280 392 aa10.69□□□□□ -0.7
BEST1-208ENST00000534553 COX6B1P14854 86 aa10.69□□□□□ -0.7
BEST1-208ENST00000534553 AKIRIN2Q53H80 203 aa10.69□□□□□ -0.7
BEST1-208ENST00000534553 ZNF562Q6V9R5 426 aa10.69□□□□□ -0.7
BEST1-208ENST00000534553 Q8N6K4 173 aa10.69□□□□□ -0.7
BEST1-208ENST00000534553 OR2T6Q8NHC8 308 aa10.69□□□□□ -0.7
BEST1-208ENST00000534553 NPIPB3Q92617 1050 aa10.69□□□□□ -0.7
BEST1-208ENST00000534553 TRGV9Q99603 122 aa10.69□□□□□ -0.7
BEST1-208ENST00000534553 SEPSECSQ9HD40 501 aaKnown RBP10.69□□□□□ -0.7
BEST1-208ENST00000534553 TMEM242Q9NWH2 141 aa10.69□□□□□ -0.7
BEST1-208ENST00000534553 ELOA3CA0A087WX78 387 aaPredicted RBP10.68□□□□□ -0.7
BEST1-208ENST00000534553 AREGP15514 252 aa10.68□□□□□ -0.7
BEST1-208ENST00000534553 ATF4P18848 351 aaPredicted RBP10.68□□□□□ -0.7
BEST1-208ENST00000534553 GCHFRP30047 84 aa10.68□□□□□ -0.7
BEST1-208ENST00000534553 MISP3Q96FF7 219 aa10.68□□□□□ -0.7
BEST1-208ENST00000534553 SMIM7Q9BQ49 75 aa10.68□□□□□ -0.7
BEST1-208ENST00000534553 C20orf24Q9BUV8 137 aa10.68□□□□□ -0.7
BEST1-208ENST00000534553 MT-ND4LP03901 98 aa10.68□□□□□ -0.7
BEST1-208ENST00000534553 REG1AP05451 166 aa10.68□□□□□ -0.7
BEST1-208ENST00000534553 DEFA4P12838 97 aa10.68□□□□□ -0.7
BEST1-208ENST00000534553 CTRB1P17538 263 aa10.68□□□□□ -0.7
BEST1-208ENST00000534553 RND2P52198 227 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms