RNA–Protein interactions for RNA: ENST00000534176.1

UBXN1-217, Transcript of UBX domain protein 1, humanhuman

TSL 3

Gene UBXN1, Length 943 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-217ENST00000534176 SPCS3P61009 180 aa11.7□□□□□ -0.54
UBXN1-217ENST00000534176 Q56UQ5 140 aa11.7□□□□□ -0.54
UBXN1-217ENST00000534176 LAMTOR1Q6IAA8 161 aa11.7□□□□□ -0.54
UBXN1-217ENST00000534176 NOXA1Q86UR1 476 aa11.7□□□□□ -0.54
UBXN1-217ENST00000534176 HAPLN4Q86UW8 402 aa11.7□□□□□ -0.54
UBXN1-217ENST00000534176 TOMM5Q8N4H5 51 aa11.7□□□□□ -0.54
UBXN1-217ENST00000534176 GLYATL2Q8WU03 294 aa11.7□□□□□ -0.54
UBXN1-217ENST00000534176 TMEM190Q8WZ59 177 aa11.7□□□□□ -0.54
UBXN1-217ENST00000534176 TMEM56-RWDD3S4R434 201 aa11.7□□□□□ -0.54
UBXN1-217ENST00000534176 A0A0B4J293 547 aa11.69□□□□□ -0.54
UBXN1-217ENST00000534176 OR2T8A6NH00 312 aa11.69□□□□□ -0.54
UBXN1-217ENST00000534176 DBX1A6NMT0 343 aa11.69□□□□□ -0.54
UBXN1-217ENST00000534176 C15orf62A8K5M9 175 aa11.69□□□□□ -0.54
UBXN1-217ENST00000534176 ST8SIA3O43173 380 aa11.69□□□□□ -0.54
UBXN1-217ENST00000534176 ETV6P41212 452 aa11.69□□□□□ -0.54
UBXN1-217ENST00000534176 PYDC2Q56P42 97 aa11.69□□□□□ -0.54
UBXN1-217ENST00000534176 C11orf87Q6NUJ2 197 aa11.69□□□□□ -0.54
UBXN1-217ENST00000534176 FAAP20Q6NZ36 180 aa11.69□□□□□ -0.54
UBXN1-217ENST00000534176 RBPMS2Q6ZRY4 209 aaKnown RBP11.69□□□□□ -0.54
UBXN1-217ENST00000534176 UXS1Q8NBZ7 420 aa11.69□□□□□ -0.54
UBXN1-217ENST00000534176 MISP3Q96FF7 219 aa11.69□□□□□ -0.54
UBXN1-217ENST00000534176 SLC25A21Q9BQT8 299 aaPredicted RBP11.69□□□□□ -0.54
UBXN1-217ENST00000534176 RBM38Q9H0Z9 239 aaKnown RBP11.69□□□□□ -0.54
UBXN1-217ENST00000534176 S4R3C0 116 aa11.69□□□□□ -0.54
UBXN1-217ENST00000534176 HOXA1P49639 335 aaPredicted RBP11.68□□□□□ -0.54
UBXN1-217ENST00000534176 MFAP2P55001 183 aa11.68□□□□□ -0.54
UBXN1-217ENST00000534176 CD81P60033 236 aa11.68□□□□□ -0.54
UBXN1-217ENST00000534176 SP6Q3SY56 376 aa11.68□□□□□ -0.54
UBXN1-217ENST00000534176 ADAMTSL5Q6ZMM2 481 aa11.68□□□□□ -0.54
UBXN1-217ENST00000534176 SBSPONQ8IVN8 264 aa11.68□□□□□ -0.54
UBXN1-217ENST00000534176 UBAC2Q8NBM4 344 aa11.68□□□□□ -0.54
UBXN1-217ENST00000534176 DUSP18Q8NEJ0 188 aa11.68□□□□□ -0.54
UBXN1-217ENST00000534176 NEURL2Q9BR09 285 aa11.68□□□□□ -0.54
UBXN1-217ENST00000534176 DUXBA0A1W2PPF3 345 aa11.67□□□□□ -0.54
UBXN1-217ENST00000534176 I3L2K1 104 aa11.67□□□□□ -0.54
UBXN1-217ENST00000534176 GNG7O60262 68 aa11.67□□□□□ -0.54
UBXN1-217ENST00000534176 MT-CO2P00403 227 aa11.67□□□□□ -0.54
UBXN1-217ENST00000534176 HTR2BP41595 481 aa11.67□□□□□ -0.54
UBXN1-217ENST00000534176 GUCA2BQ16661 112 aa11.67□□□□□ -0.54
UBXN1-217ENST00000534176 PVRIGQ6DKI7 326 aa11.67□□□□□ -0.54
UBXN1-217ENST00000534176 CCDC190Q86UF4 302 aa11.67□□□□□ -0.54
UBXN1-217ENST00000534176 SPAG8Q99932 426 aaPredicted RBP11.67□□□□□ -0.54
UBXN1-217ENST00000534176 SPATA25Q9BR10 227 aa11.67□□□□□ -0.54
UBXN1-217ENST00000534176 TM2D3Q9BRN9 247 aa11.67□□□□□ -0.54
UBXN1-217ENST00000534176 GINS3Q9BRX5 216 aa11.67□□□□□ -0.54
UBXN1-217ENST00000534176 COL7A1Q02388 2944 aa11.67□□□□□ -0.54
UBXN1-217ENST00000534176 A0A0B4J2A0 478 aa11.66□□□□□ -0.54
UBXN1-217ENST00000534176 RPS10-NUDT3A0A1W2PQS6 291 aa11.66□□□□□ -0.54
UBXN1-217ENST00000534176 ZNF785A8K8V0 405 aa11.66□□□□□ -0.54
UBXN1-217ENST00000534176 CTSGP08311 255 aa11.66□□□□□ -0.54
UBXN1-217ENST00000534176 ATP5IP56385 69 aaPredicted RBP11.66□□□□□ -0.54
UBXN1-217ENST00000534176 TMEM128Q5BJH2 165 aa11.66□□□□□ -0.54
UBXN1-217ENST00000534176 TMEM268Q5VZI3 342 aa11.66□□□□□ -0.54
UBXN1-217ENST00000534176 UNQ9165/PRO28630Q6UXU0 137 aa11.66□□□□□ -0.54
UBXN1-217ENST00000534176 SELENOHQ8IZQ5 122 aaKnown RBP11.66□□□□□ -0.54
UBXN1-217ENST00000534176 LGI3Q8N145 548 aa11.66□□□□□ -0.54
UBXN1-217ENST00000534176 TRIM63Q969Q1 353 aa11.66□□□□□ -0.54
UBXN1-217ENST00000534176 ASCL2Q99929 193 aa11.66□□□□□ -0.54
UBXN1-217ENST00000534176 HIPK2Q9H2X6 1198 aa11.66□□□□□ -0.54
UBXN1-217ENST00000534176 SHPKQ9UHJ6 478 aa11.66□□□□□ -0.54
UBXN1-217ENST00000534176 V9GYH0 126 aa11.66□□□□□ -0.54
UBXN1-217ENST00000534176 TRAV30A0A087WSZ9 112 aa11.65□□□□□ -0.54
UBXN1-217ENST00000534176 IZUMO1RA6ND01 250 aa11.65□□□□□ -0.54
UBXN1-217ENST00000534176 SULT1A3P0DMM9 295 aa11.65□□□□□ -0.54
UBXN1-217ENST00000534176 SULT1A4P0DMN0 295 aa11.65□□□□□ -0.54
UBXN1-217ENST00000534176 INPP1P49441 399 aa11.65□□□□□ -0.54
UBXN1-217ENST00000534176 CCR6P51684 374 aa11.65□□□□□ -0.54
UBXN1-217ENST00000534176 CMC4P56277 68 aaPredicted RBP11.65□□□□□ -0.54
UBXN1-217ENST00000534176 KLF9Q13886 244 aaPredicted RBP11.65□□□□□ -0.54
UBXN1-217ENST00000534176 TM4SF20Q53R12 229 aa11.65□□□□□ -0.54
UBXN1-217ENST00000534176 ETFRF1Q6IPR1 90 aa11.65□□□□□ -0.54
UBXN1-217ENST00000534176 TMEM61Q8N0U2 210 aa11.65□□□□□ -0.54
UBXN1-217ENST00000534176 OR52B4Q8NGK2 314 aa11.65□□□□□ -0.54
UBXN1-217ENST00000534176 PINX1Q96BK5 328 aaKnown RBP11.65□□□□□ -0.54
UBXN1-217ENST00000534176 OR10C1Q96KK4 312 aa11.65□□□□□ -0.54
UBXN1-217ENST00000534176 RCHY1Q96PM5 261 aa11.65□□□□□ -0.54
UBXN1-217ENST00000534176 FAM110AQ9BQ89 295 aa11.65□□□□□ -0.54
UBXN1-217ENST00000534176 MLXQ9UH92 298 aa11.65□□□□□ -0.54
UBXN1-217ENST00000534176 NAP1L6A6NFF2 107 aa11.64□□□□□ -0.55
UBXN1-217ENST00000534176 OR11H12B2RN74 326 aa11.64□□□□□ -0.55
UBXN1-217ENST00000534176 F8W735 103 aaPredicted RBP11.64□□□□□ -0.55
UBXN1-217ENST00000534176 C3orf84H3BNL1 204 aa11.64□□□□□ -0.55
UBXN1-217ENST00000534176 TSPAN4O14817 238 aa11.64□□□□□ -0.55
UBXN1-217ENST00000534176 AKR1C4P17516 323 aa11.64□□□□□ -0.55
UBXN1-217ENST00000534176 UBE2MP61081 183 aaKnown RBP11.64□□□□□ -0.55
UBXN1-217ENST00000534176 TMEM187Q14656 261 aa11.64□□□□□ -0.55
UBXN1-217ENST00000534176 BSXQ3C1V8 233 aa11.64□□□□□ -0.55
UBXN1-217ENST00000534176 BTNL8Q6UX41 500 aa11.64□□□□□ -0.55
UBXN1-217ENST00000534176 RNASEH2CQ8TDP1 164 aaKnown RBP11.64□□□□□ -0.55
UBXN1-217ENST00000534176 CHRDL1Q9BU40 450 aa11.64□□□□□ -0.55
UBXN1-217ENST00000534176 HEYLQ9NQ87 328 aaPredicted RBP11.64□□□□□ -0.55
UBXN1-217ENST00000534176 CACNG5Q9UF02 275 aa11.64□□□□□ -0.55
UBXN1-217ENST00000534176 OR4C46A6NHA9 309 aa11.63□□□□□ -0.55
UBXN1-217ENST00000534176 RNASE2P10153 161 aaKnown RBP11.63□□□□□ -0.55
UBXN1-217ENST00000534176 SLC25A4P12235 298 aa11.63□□□□□ -0.55
UBXN1-217ENST00000534176 ADMP35318 185 aa11.63□□□□□ -0.55
UBXN1-217ENST00000534176 OPRK1P41145 380 aa11.63□□□□□ -0.55
UBXN1-217ENST00000534176 RBMS2Q15434 407 aaKnown RBP11.63□□□□□ -0.55
UBXN1-217ENST00000534176 IZUMO4Q1ZYL8 232 aa11.63□□□□□ -0.55
UBXN1-217ENST00000534176 CNPY1Q3B7I2 92 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 112.1 ms