RNA–Protein interactions for RNA: ENST00000534106.2

CHMP4A-208, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 5

Gene CHMP4A, Length 370 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-208ENST00000534106 SAV1Q9H4B6 383 aaPredicted RBP2.12□□□□□ -2.07
CHMP4A-208ENST00000534106 CHMP1AQ9HD42 196 aaPredicted RBP2.12□□□□□ -2.07
CHMP4A-208ENST00000534106 FGF20Q9NP95 211 aaPredicted RBP2.12□□□□□ -2.07
CHMP4A-208ENST00000534106 CMC2Q9NRP2 79 aa2.12□□□□□ -2.07
CHMP4A-208ENST00000534106 GAGE2DQ9UEU5 116 aa2.12□□□□□ -2.07
CHMP4A-208ENST00000534106 CELA1Q9UNI1 258 aa2.12□□□□□ -2.07
CHMP4A-208ENST00000534106 FLVCR2Q9UPI3 526 aa2.12□□□□□ -2.07
CHMP4A-208ENST00000534106 R4GMQ9 66 aa2.12□□□□□ -2.07
CHMP4A-208ENST00000534106 DEFB131BA0A096LNP1 70 aa2.11□□□□□ -2.07
CHMP4A-208ENST00000534106 IGHV3-35A0A0C4DH35 117 aa2.11□□□□□ -2.07
CHMP4A-208ENST00000534106 A0A0G2JLM5 398 aa2.11□□□□□ -2.07
CHMP4A-208ENST00000534106 LOC105371267A0A1B0GV96 52 aa2.11□□□□□ -2.07
CHMP4A-208ENST00000534106 KANTRA0A1W2PQU2 76 aa2.11□□□□□ -2.07
CHMP4A-208ENST00000534106 TMEM213A2RRL7 107 aa2.11□□□□□ -2.07
CHMP4A-208ENST00000534106 C15orf62A8K5M9 175 aa2.11□□□□□ -2.07
CHMP4A-208ENST00000534106 LGALS9O00182 355 aa2.11□□□□□ -2.07
CHMP4A-208ENST00000534106 UBE2CO00762 179 aa2.11□□□□□ -2.07
CHMP4A-208ENST00000534106 PDCD5O14737 125 aa2.11□□□□□ -2.07
CHMP4A-208ENST00000534106 CREBL2O60519 120 aaPredicted RBP2.11□□□□□ -2.07
CHMP4A-208ENST00000534106 ZNF254O75437 659 aa2.11□□□□□ -2.07
CHMP4A-208ENST00000534106 GATBO75879 557 aaKnown RBP2.11□□□□□ -2.07
CHMP4A-208ENST00000534106 OR2A4O95047 310 aa2.11□□□□□ -2.07
CHMP4A-208ENST00000534106 CYB5AP00167 134 aa2.11□□□□□ -2.07
CHMP4A-208ENST00000534106 SERPINA3P01011 423 aa2.11□□□□□ -2.07
CHMP4A-208ENST00000534106 HBZP02008 142 aa2.11□□□□□ -2.07
CHMP4A-208ENST00000534106 MAS1P04201 325 aa2.11□□□□□ -2.07
CHMP4A-208ENST00000534106 TCRBP04435 133 aa2.11□□□□□ -2.07
CHMP4A-208ENST00000534106 LIMS3P0CW19 117 aa2.11□□□□□ -2.07
CHMP4A-208ENST00000534106 LIMS4P0CW20 117 aa2.11□□□□□ -2.07
CHMP4A-208ENST00000534106 P0DMU3 169 aa2.11□□□□□ -2.07
CHMP4A-208ENST00000534106 FAM231AP0DMU4 169 aa2.11□□□□□ -2.07
CHMP4A-208ENST00000534106 FAM231CP0DMU5 169 aa2.11□□□□□ -2.07
CHMP4A-208ENST00000534106 PTHLHP12272 177 aa2.11□□□□□ -2.07
CHMP4A-208ENST00000534106 GTF2F2P13984 249 aa2.11□□□□□ -2.07
CHMP4A-208ENST00000534106 RPA2P15927 270 aa2.11□□□□□ -2.07
CHMP4A-208ENST00000534106 RCC1P18754 421 aaPredicted RBP2.11□□□□□ -2.07
CHMP4A-208ENST00000534106 GZMHP20718 246 aa2.11□□□□□ -2.07
CHMP4A-208ENST00000534106 CCL1P22362 96 aa2.11□□□□□ -2.07
CHMP4A-208ENST00000534106 SLC2A5P22732 501 aa2.11□□□□□ -2.07
CHMP4A-208ENST00000534106 IL3RAP26951 378 aa2.11□□□□□ -2.07
CHMP4A-208ENST00000534106 BDKRB2P30411 391 aa2.11□□□□□ -2.07
CHMP4A-208ENST00000534106 FAUP35544 74 aaKnown RBP2.11□□□□□ -2.07
CHMP4A-208ENST00000534106 PPP1CCP36873 323 aaKnown RBP2.11□□□□□ -2.07
CHMP4A-208ENST00000534106 RPL35P42766 123 aaKnown RBP2.11□□□□□ -2.07
CHMP4A-208ENST00000534106 RIDAP52758 137 aaKnown RBP2.11□□□□□ -2.07
CHMP4A-208ENST00000534106 TAS2R43P59537 309 aa2.11□□□□□ -2.07
CHMP4A-208ENST00000534106 AP3S2P59780 193 aa2.11□□□□□ -2.07
CHMP4A-208ENST00000534106 CDK5Q00535 292 aa2.11□□□□□ -2.07
CHMP4A-208ENST00000534106 ATP5G2Q06055 141 aa2.11□□□□□ -2.07
CHMP4A-208ENST00000534106 BTN1A1Q13410 526 aa2.11□□□□□ -2.07
CHMP4A-208ENST00000534106 OPCMLQ14982 345 aa2.11□□□□□ -2.07
CHMP4A-208ENST00000534106 C12orf74Q32Q52 190 aa2.11□□□□□ -2.07
CHMP4A-208ENST00000534106 LRRC37A5PQ49AS3 106 aa2.11□□□□□ -2.07
CHMP4A-208ENST00000534106 MORN2Q502X0 79 aa2.11□□□□□ -2.07
CHMP4A-208ENST00000534106 ACSM3Q53FZ2 586 aa2.11□□□□□ -2.07
CHMP4A-208ENST00000534106 PVRIGQ6DKI7 326 aa2.11□□□□□ -2.07
CHMP4A-208ENST00000534106 RAB12Q6IQ22 244 aa2.11□□□□□ -2.07
CHMP4A-208ENST00000534106 PYHIN1Q6K0P9 492 aa2.11□□□□□ -2.07
CHMP4A-208ENST00000534106 DEGS2Q6QHC5 323 aa2.11□□□□□ -2.07
CHMP4A-208ENST00000534106 BTNL8Q6UX41 500 aa2.11□□□□□ -2.07
CHMP4A-208ENST00000534106 ALKAL2Q6UX46 152 aa2.11□□□□□ -2.07
CHMP4A-208ENST00000534106 UNQ9165/PRO28630Q6UXU0 137 aa2.11□□□□□ -2.07
CHMP4A-208ENST00000534106 ZNF562Q6V9R5 426 aa2.11□□□□□ -2.07
CHMP4A-208ENST00000534106 ACBD7Q8N6N7 88 aa2.11□□□□□ -2.07
CHMP4A-208ENST00000534106 C8orf31Q8N9H6 132 aa2.11□□□□□ -2.07
CHMP4A-208ENST00000534106 CHST4Q8NCG5 386 aa2.11□□□□□ -2.07
CHMP4A-208ENST00000534106 OR10A7Q8NGE5 316 aa2.11□□□□□ -2.07
CHMP4A-208ENST00000534106 OR51A4Q8NGJ6 313 aa2.11□□□□□ -2.07
CHMP4A-208ENST00000534106 OR13C9Q8NGT0 318 aa2.11□□□□□ -2.07
CHMP4A-208ENST00000534106 OR4K15Q8NH41 348 aa2.11□□□□□ -2.07
CHMP4A-208ENST00000534106 OR52N1Q8NH53 320 aa2.11□□□□□ -2.07
CHMP4A-208ENST00000534106 KCNG3Q8TAE7 436 aa2.11□□□□□ -2.07
CHMP4A-208ENST00000534106 FCAMRQ8WWV6 532 aa2.11□□□□□ -2.07
CHMP4A-208ENST00000534106 RBPMSQ93062 196 aaKnown RBP2.11□□□□□ -2.07
CHMP4A-208ENST00000534106 MRPS24Q96EL2 167 aaKnown RBP2.11□□□□□ -2.07
CHMP4A-208ENST00000534106 LINC00052Q96N35 136 aa2.11□□□□□ -2.07
CHMP4A-208ENST00000534106 ZNF436Q9C0F3 470 aaPredicted RBP2.11□□□□□ -2.07
CHMP4A-208ENST00000534106 MFFQ9GZY8 342 aa2.11□□□□□ -2.07
CHMP4A-208ENST00000534106 ARL6Q9H0F7 186 aa2.11□□□□□ -2.07
CHMP4A-208ENST00000534106 CSTL1Q9H114 145 aa2.11□□□□□ -2.07
CHMP4A-208ENST00000534106 KCNK15Q9H427 330 aa2.11□□□□□ -2.07
CHMP4A-208ENST00000534106 OR2S2Q9NQN1 319 aa2.11□□□□□ -2.07
CHMP4A-208ENST00000534106 COA4Q9NYJ1 87 aa2.11□□□□□ -2.07
CHMP4A-208ENST00000534106 TECRQ9NZ01 308 aaKnown RBP2.11□□□□□ -2.07
CHMP4A-208ENST00000534106 COMMD9Q9P000 198 aa2.11□□□□□ -2.07
CHMP4A-208ENST00000534106 GNG12Q9UBI6 72 aa2.11□□□□□ -2.07
CHMP4A-208ENST00000534106 METTL1Q9UBP6 276 aaKnown RBP2.11□□□□□ -2.07
CHMP4A-208ENST00000534106 ZNF230Q9UIE0 474 aaPredicted RBP2.11□□□□□ -2.07
CHMP4A-208ENST00000534106 SCP2D1Q9UJQ7 156 aa2.11□□□□□ -2.07
CHMP4A-208ENST00000534106 RNF150Q9ULK6 438 aa2.11□□□□□ -2.07
CHMP4A-208ENST00000534106 TNXBP22105 4242 aa2.11□□□□□ -2.07
CHMP4A-208ENST00000534106 DSCAML1Q8TD84 2053 aa2.1□□□□□ -2.07
CHMP4A-208ENST00000534106 IGHV3OR16-8A0A075B7F1 116 aa2.1□□□□□ -2.07
CHMP4A-208ENST00000534106 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP2.1□□□□□ -2.07
CHMP4A-208ENST00000534106 TRAV10A0A0B4J240 114 aa2.1□□□□□ -2.07
CHMP4A-208ENST00000534106 KIR2DL5BA0A0G2JN68 375 aa2.1□□□□□ -2.07
CHMP4A-208ENST00000534106 KIR2DL5BA0A0G2JPC4 375 aa2.1□□□□□ -2.07
CHMP4A-208ENST00000534106 LOC107986453A0A1B0GWG9 222 aa2.1□□□□□ -2.07
CHMP4A-208ENST00000534106 hDV102S1A0JD36 115 aa2.1□□□□□ -2.07
CHMP4A-208ENST00000534106 TMEM30CPA0ZSE6 113 aa2.1□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms