RNA–Protein interactions for RNA: ENST00000533910.5

CHKA-208, Transcript of choline kinase alpha, human

TSL 3

Gene CHKA, Length 864 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHKA-208	ENST00000533910	BPESC1	Q9GZL8	116 aa		4.58	□□□□□ -1.68
CHKA-208	ENST00000533910	SLC25A31	Q9H0C2	315 aa		4.58	□□□□□ -1.68
CHKA-208	ENST00000533910	ARV1	Q9H2C2	271 aa		4.58	□□□□□ -1.68
CHKA-208	ENST00000533910	CTNNBIP1	Q9NSA3	81 aa	Predicted RBP	4.58	□□□□□ -1.68
CHKA-208	ENST00000533910	CACFD1	Q9UGQ2	172 aa		4.58	□□□□□ -1.68
CHKA-208	ENST00000533910	AUP1	Q9Y679	476 aa		4.58	□□□□□ -1.68
CHKA-208	ENST00000533910	TENM4	Q6N022	2769 aa		4.57	□□□□□ -1.68
CHKA-208	ENST00000533910	LINC00862	A6NCI5	91 aa		4.57	□□□□□ -1.68
CHKA-208	ENST00000533910	FAM24A	A6NFZ4	105 aa		4.57	□□□□□ -1.68
CHKA-208	ENST00000533910	C15orf61	A6NNL5	157 aa		4.57	□□□□□ -1.68
CHKA-208	ENST00000533910	ODF3B	A8MYP8	253 aa		4.57	□□□□□ -1.68
CHKA-208	ENST00000533910	LY6L	H3BQJ8	138 aa		4.57	□□□□□ -1.68
CHKA-208	ENST00000533910	TRIM77	I1YAP6	450 aa		4.57	□□□□□ -1.68
CHKA-208	ENST00000533910	ENSA	O43768	121 aa	Known RBP	4.57	□□□□□ -1.68
CHKA-208	ENST00000533910	CHST1	O43916	411 aa		4.57	□□□□□ -1.68
CHKA-208	ENST00000533910	MED6	O75586	246 aa		4.57	□□□□□ -1.68
CHKA-208	ENST00000533910	CRYZL1	O95825	349 aa		4.57	□□□□□ -1.68
CHKA-208	ENST00000533910	HRAS	P01112	189 aa		4.57	□□□□□ -1.68
CHKA-208	ENST00000533910	APOA2	P02652	100 aa		4.57	□□□□□ -1.68
CHKA-208	ENST00000533910	IGKV1-16	P04430	117 aa		4.57	□□□□□ -1.68
CHKA-208	ENST00000533910	ARG1	P05089	322 aa		4.57	□□□□□ -1.68
CHKA-208	ENST00000533910	FGF2	P09038	288 aa		4.57	□□□□□ -1.68
CHKA-208	ENST00000533910	VPREB1	P12018	145 aa		4.57	□□□□□ -1.68
CHKA-208	ENST00000533910	COX6B1	P14854	86 aa		4.57	□□□□□ -1.68
CHKA-208	ENST00000533910	PRTN3	P24158	256 aa		4.57	□□□□□ -1.68
CHKA-208	ENST00000533910	SULT1A1	P50225	295 aa		4.57	□□□□□ -1.68
CHKA-208	ENST00000533910	RAB13	P51153	203 aa		4.57	□□□□□ -1.68
CHKA-208	ENST00000533910	CAV2	P51636	162 aa		4.57	□□□□□ -1.68
CHKA-208	ENST00000533910	UBE2K	P61086	200 aa		4.57	□□□□□ -1.68
CHKA-208	ENST00000533910	LMO4	P61968	165 aa		4.57	□□□□□ -1.68
CHKA-208	ENST00000533910	EIF5A	P63241	154 aa	Known RBP	4.57	□□□□□ -1.68
CHKA-208	ENST00000533910	FHL2	Q14192	279 aa		4.57	□□□□□ -1.68
CHKA-208	ENST00000533910	RPL7L1	Q6DKI1	246 aa	Known RBP	4.57	□□□□□ -1.68
CHKA-208	ENST00000533910	OR4A47	Q6IF82	309 aa		4.57	□□□□□ -1.68
CHKA-208	ENST00000533910	HCP5	Q6MZN7	132 aa		4.57	□□□□□ -1.68
CHKA-208	ENST00000533910	FAM122C	Q6P4D5	195 aa		4.57	□□□□□ -1.68
CHKA-208	ENST00000533910	ALKAL2	Q6UX46	152 aa		4.57	□□□□□ -1.68
CHKA-208	ENST00000533910	TGIF2LX	Q8IUE1	241 aa		4.57	□□□□□ -1.68
CHKA-208	ENST00000533910	BAP18	Q8IXM2	172 aa		4.57	□□□□□ -1.68
CHKA-208	ENST00000533910	PUSL1	Q8N0Z8	303 aa	Known RBP	4.57	□□□□□ -1.68
CHKA-208	ENST00000533910	OR4P4	Q8NGL7	312 aa		4.57	□□□□□ -1.68
CHKA-208	ENST00000533910	OR13D1	Q8NGV5	346 aa		4.57	□□□□□ -1.68
CHKA-208	ENST00000533910	CLDND2	Q8NHS1	167 aa		4.57	□□□□□ -1.68
CHKA-208	ENST00000533910	C10orf105	Q8TEF2	133 aa		4.57	□□□□□ -1.68
CHKA-208	ENST00000533910	RNF183	Q96D59	192 aa		4.57	□□□□□ -1.68
CHKA-208	ENST00000533910	CIB3	Q96Q77	187 aa	Predicted RBP	4.57	□□□□□ -1.68
CHKA-208	ENST00000533910	SIRPD	Q9H106	197 aa		4.57	□□□□□ -1.68
CHKA-208	ENST00000533910	RBKS	Q9H477	322 aa		4.57	□□□□□ -1.68
CHKA-208	ENST00000533910	NARFL	Q9H6Q4	476 aa		4.57	□□□□□ -1.68
CHKA-208	ENST00000533910	ZC4H2	Q9NQZ6	224 aa		4.57	□□□□□ -1.68
CHKA-208	ENST00000533910	TMEM14B	Q9NUH8	114 aa		4.57	□□□□□ -1.68
CHKA-208	ENST00000533910	MED9	Q9NWA0	146 aa		4.57	□□□□□ -1.68
CHKA-208	ENST00000533910	AMMECR1	Q9Y4X0	333 aa	Predicted RBP	4.57	□□□□□ -1.68
CHKA-208	ENST00000533910	KPTN	Q9Y664	436 aa		4.57	□□□□□ -1.68
CHKA-208	ENST00000533910	ANKRD17	O75179	2603 aa	Known RBP	4.57	□□□□□ -1.68
CHKA-208	ENST00000533910	ARHGAP32	A7KAX9	2087 aa		4.57	□□□□□ -1.68
CHKA-208	ENST00000533910	TACC2	O95359	2948 aa		4.56	□□□□□ -1.68
CHKA-208	ENST00000533910	FBN2	P35556	2912 aa		4.56	□□□□□ -1.68
CHKA-208	ENST00000533910	BORCS7-ASMT	A0A0B4J1R7	106 aa		4.56	□□□□□ -1.68
CHKA-208	ENST00000533910	IGHV2-70D	A0A0C4DH43	119 aa		4.56	□□□□□ -1.68
CHKA-208	ENST00000533910		A0A1W2PPI3	338 aa		4.56	□□□□□ -1.68
CHKA-208	ENST00000533910		H3BP45	60 aa		4.56	□□□□□ -1.68
CHKA-208	ENST00000533910	BUB1B-PAK6	H3BSN5	160 aa		4.56	□□□□□ -1.68
CHKA-208	ENST00000533910	FGF16	O43320	207 aa		4.56	□□□□□ -1.68
CHKA-208	ENST00000533910	SAA1	P0DJI8	122 aa	Predicted RBP	4.56	□□□□□ -1.68
CHKA-208	ENST00000533910	SPP1	P10451	314 aa		4.56	□□□□□ -1.68
CHKA-208	ENST00000533910	IAPP	P10997	89 aa		4.56	□□□□□ -1.68
CHKA-208	ENST00000533910	PLA2G2A	P14555	144 aa		4.56	□□□□□ -1.68
CHKA-208	ENST00000533910	HNF1A	P20823	631 aa		4.56	□□□□□ -1.68
CHKA-208	ENST00000533910	COX7A1	P24310	79 aa		4.56	□□□□□ -1.68
CHKA-208	ENST00000533910	OR2B8P	P59922	312 aa		4.56	□□□□□ -1.68
CHKA-208	ENST00000533910	SPCS3	P61009	180 aa		4.56	□□□□□ -1.68
CHKA-208	ENST00000533910	DIAPH2-AS1	Q14236	149 aa		4.56	□□□□□ -1.68
CHKA-208	ENST00000533910	ZNF266	Q14584	549 aa		4.56	□□□□□ -1.68
CHKA-208	ENST00000533910	ASPHD1	Q5U4P2	390 aa		4.56	□□□□□ -1.68
CHKA-208	ENST00000533910	TMEM14EP	Q6UXP3	125 aa		4.56	□□□□□ -1.68
CHKA-208	ENST00000533910	VKORC1L1	Q8N0U8	176 aa		4.56	□□□□□ -1.68
CHKA-208	ENST00000533910	PNKD	Q8N490	385 aa		4.56	□□□□□ -1.68
CHKA-208	ENST00000533910	OR4C13	Q8NGP0	309 aa		4.56	□□□□□ -1.68
CHKA-208	ENST00000533910	DTD1	Q8TEA8	209 aa		4.56	□□□□□ -1.68
CHKA-208	ENST00000533910	CACNG8	Q8WXS5	425 aa		4.56	□□□□□ -1.68
CHKA-208	ENST00000533910	DUX5	Q96PT3	197 aa		4.56	□□□□□ -1.68
CHKA-208	ENST00000533910	OR4C12	Q96R67	309 aa		4.56	□□□□□ -1.68
CHKA-208	ENST00000533910	GINS3	Q9BRX5	216 aa		4.56	□□□□□ -1.68
CHKA-208	ENST00000533910	ATG101	Q9BSB4	218 aa		4.56	□□□□□ -1.68
CHKA-208	ENST00000533910	SMIM3	Q9BZL3	60 aa		4.56	□□□□□ -1.68
CHKA-208	ENST00000533910	WFDC1	Q9HC57	220 aa		4.56	□□□□□ -1.68
CHKA-208	ENST00000533910	YAE1D1	Q9NRH1	226 aa		4.56	□□□□□ -1.68
CHKA-208	ENST00000533910	CLEC5A	Q9NY25	188 aa		4.56	□□□□□ -1.68
CHKA-208	ENST00000533910	BET1L	Q9NYM9	111 aa		4.56	□□□□□ -1.68
CHKA-208	ENST00000533910	PSENEN	Q9NZ42	101 aa		4.56	□□□□□ -1.68
CHKA-208	ENST00000533910	PRND	Q9UKY0	176 aa		4.56	□□□□□ -1.68
CHKA-208	ENST00000533910	ZNF257	Q9Y2Q1	563 aa		4.56	□□□□□ -1.68
CHKA-208	ENST00000533910	WASHC3	Q9Y3C0	194 aa		4.56	□□□□□ -1.68
CHKA-208	ENST00000533910	TNFRSF18	Q9Y5U5	241 aa		4.56	□□□□□ -1.68
CHKA-208	ENST00000533910	TNC	P24821	2201 aa		4.56	□□□□□ -1.68
CHKA-208	ENST00000533910	PTPN13	Q12923	2485 aa		4.55	□□□□□ -1.68
CHKA-208	ENST00000533910	SPG11	Q96JI7	2443 aa		4.55	□□□□□ -1.68
CHKA-208	ENST00000533910	TRAV3	A0A0B4J244	114 aa		4.55	□□□□□ -1.68
CHKA-208	ENST00000533910	IGHV1-3	A0A0C4DH29	117 aa		4.55	□□□□□ -1.68

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