RNA–Protein interactions for RNA: ENST00000533909.5

CAPN1-227, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 573 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-227ENST00000533909 LGALS9O00182 355 aa10.2□□□□□ -0.78
CAPN1-227ENST00000533909 CCR6P51684 374 aa10.2□□□□□ -0.78
CAPN1-227ENST00000533909 MFAP2P55001 183 aa10.2□□□□□ -0.78
CAPN1-227ENST00000533909 PRKDCP78527 4128 aaKnown RBP10.2□□□□□ -0.78
CAPN1-227ENST00000533909 SPSB3Q6PJ21 355 aa10.2□□□□□ -0.78
CAPN1-227ENST00000533909 GPR146Q96CH1 333 aa10.2□□□□□ -0.78
CAPN1-227ENST00000533909 ATP6V0BQ99437 205 aa10.2□□□□□ -0.78
CAPN1-227ENST00000533909 C7orf50Q9BRJ6 194 aaKnown RBP10.2□□□□□ -0.78
CAPN1-227ENST00000533909 SIGLEC8Q9NYZ4 499 aa10.2□□□□□ -0.78
CAPN1-227ENST00000533909 SHPKQ9UHJ6 478 aa10.2□□□□□ -0.78
CAPN1-227ENST00000533909 DNAH3Q8TD57 4116 aa10.19□□□□□ -0.78
CAPN1-227ENST00000533909 IGHV3-35A0A0C4DH35 117 aa10.19□□□□□ -0.78
CAPN1-227ENST00000533909 K7EIM0 57 aa10.19□□□□□ -0.78
CAPN1-227ENST00000533909 CORTO00230 105 aa10.19□□□□□ -0.78
CAPN1-227ENST00000533909 NUPL2O15504 423 aaKnown RBP10.19□□□□□ -0.78
CAPN1-227ENST00000533909 MT-CO2P00403 227 aa10.19□□□□□ -0.78
CAPN1-227ENST00000533909 IL7P13232 177 aa10.19□□□□□ -0.78
CAPN1-227ENST00000533909 MFAP4P55083 255 aa10.19□□□□□ -0.78
CAPN1-227ENST00000533909 SUPT4H1P63272 117 aaKnown RBP10.19□□□□□ -0.78
CAPN1-227ENST00000533909 IL34Q6ZMJ4 242 aa10.19□□□□□ -0.78
CAPN1-227ENST00000533909 Q6ZRM9 215 aa10.19□□□□□ -0.78
CAPN1-227ENST00000533909 LYZL2Q7Z4W2 148 aa10.19□□□□□ -0.78
CAPN1-227ENST00000533909 GTSCR1Q86UQ5 136 aa10.19□□□□□ -0.78
CAPN1-227ENST00000533909 OR52E5Q8NH55 327 aa10.19□□□□□ -0.78
CAPN1-227ENST00000533909 OR1S1Q8NH92 325 aa10.19□□□□□ -0.78
CAPN1-227ENST00000533909 HIPK2Q9H2X6 1198 aa10.19□□□□□ -0.78
CAPN1-227ENST00000533909 UFC1Q9Y3C8 167 aa10.19□□□□□ -0.78
CAPN1-227ENST00000533909 SMAD5-AS1Q9Y6J3 95 aa10.19□□□□□ -0.78
CAPN1-227ENST00000533909 C2orf70A6NJV1 201 aa10.18□□□□□ -0.78
CAPN1-227ENST00000533909 INS-IGF2F8WCM5 200 aa10.18□□□□□ -0.78
CAPN1-227ENST00000533909 GNG7O60262 68 aa10.18□□□□□ -0.78
CAPN1-227ENST00000533909 SCGB2A1O75556 95 aa10.18□□□□□ -0.78
CAPN1-227ENST00000533909 NXPH3O95157 252 aa10.18□□□□□ -0.78
CAPN1-227ENST00000533909 FOLR2P14207 255 aa10.18□□□□□ -0.78
CAPN1-227ENST00000533909 NPBWR1P48145 328 aa10.18□□□□□ -0.78
CAPN1-227ENST00000533909 UBE2MP61081 183 aaKnown RBP10.18□□□□□ -0.78
CAPN1-227ENST00000533909 RELQ04864 619 aaPredicted RBP10.18□□□□□ -0.78
CAPN1-227ENST00000533909 SMCO1Q147U7 214 aa10.18□□□□□ -0.78
CAPN1-227ENST00000533909 DUSP18Q8NEJ0 188 aa10.18□□□□□ -0.78
CAPN1-227ENST00000533909 OR2K2Q8NGT1 345 aa10.18□□□□□ -0.78
CAPN1-227ENST00000533909 TXN2Q99757 166 aa10.18□□□□□ -0.78
CAPN1-227ENST00000533909 TECRQ9NZ01 308 aaKnown RBP10.18□□□□□ -0.78
CAPN1-227ENST00000533909 DUXBA0A1W2PPF3 345 aa10.17□□□□□ -0.78
CAPN1-227ENST00000533909 A8MWP6 167 aa10.17□□□□□ -0.78
CAPN1-227ENST00000533909 YIF1AO95070 293 aa10.17□□□□□ -0.78
CAPN1-227ENST00000533909 NDUFB6O95139 128 aa10.17□□□□□ -0.78
CAPN1-227ENST00000533909 IGHV3-48P01763 117 aa10.17□□□□□ -0.78
CAPN1-227ENST00000533909 OPRK1P41145 380 aa10.17□□□□□ -0.78
CAPN1-227ENST00000533909 HTR2BP41595 481 aa10.17□□□□□ -0.78
CAPN1-227ENST00000533909 PPP1R1AQ13522 171 aa10.17□□□□□ -0.78
CAPN1-227ENST00000533909 GUCA2BQ16661 112 aa10.17□□□□□ -0.78
CAPN1-227ENST00000533909 CNPY1Q3B7I2 92 aa10.17□□□□□ -0.78
CAPN1-227ENST00000533909 NOXA1Q86UR1 476 aa10.17□□□□□ -0.78
CAPN1-227ENST00000533909 S100ZQ8WXG8 99 aa10.17□□□□□ -0.78
CAPN1-227ENST00000533909 MARC2Q969Z3 335 aa10.17□□□□□ -0.78
CAPN1-227ENST00000533909 B9D2Q9BPU9 175 aa10.17□□□□□ -0.78
CAPN1-227ENST00000533909 C20orf24Q9BUV8 137 aa10.17□□□□□ -0.78
CAPN1-227ENST00000533909 A0A1B0GU03 582 aa10.16□□□□□ -0.78
CAPN1-227ENST00000533909 I3L2K1 104 aa10.16□□□□□ -0.78
CAPN1-227ENST00000533909 NDUFA4O00483 81 aa10.16□□□□□ -0.78
CAPN1-227ENST00000533909 SFT2D2O95562 160 aa10.16□□□□□ -0.78
CAPN1-227ENST00000533909 RNASE2P10153 161 aaKnown RBP10.16□□□□□ -0.78
CAPN1-227ENST00000533909 CBLN1P23435 193 aa10.16□□□□□ -0.78
CAPN1-227ENST00000533909 CD300EQ496F6 205 aaPredicted RBP10.16□□□□□ -0.78
CAPN1-227ENST00000533909 AARDQ4LEZ3 155 aa10.16□□□□□ -0.78
CAPN1-227ENST00000533909 C4orf46Q504U0 113 aa10.16□□□□□ -0.78
CAPN1-227ENST00000533909 TM4SF20Q53R12 229 aa10.16□□□□□ -0.78
CAPN1-227ENST00000533909 NMSQ5H8A3 153 aa10.16□□□□□ -0.78
CAPN1-227ENST00000533909 LINC00299Q6ZSB3 139 aa10.16□□□□□ -0.78
CAPN1-227ENST00000533909 UXS1Q8NBZ7 420 aa10.16□□□□□ -0.78
CAPN1-227ENST00000533909 SLC24A4Q8NFF2 622 aa10.16□□□□□ -0.78
CAPN1-227ENST00000533909 CACNG8Q8WXS5 425 aa10.16□□□□□ -0.78
CAPN1-227ENST00000533909 SDHCQ99643 169 aaPredicted RBP10.16□□□□□ -0.78
CAPN1-227ENST00000533909 CHRDL1Q9BU40 450 aa10.16□□□□□ -0.78
CAPN1-227ENST00000533909 LSM4Q9Y4Z0 139 aaKnown RBP10.16□□□□□ -0.78
CAPN1-227ENST00000533909 RPS10-NUDT3A0A1W2PQS6 291 aa10.15□□□□□ -0.78
CAPN1-227ENST00000533909 TMEM213A2RRL7 107 aa10.15□□□□□ -0.78
CAPN1-227ENST00000533909 A6NHS1 94 aa10.15□□□□□ -0.78
CAPN1-227ENST00000533909 IFNA10P01566 189 aa10.15□□□□□ -0.78
CAPN1-227ENST00000533909 ELLP55199 621 aaPredicted RBP10.15□□□□□ -0.78
CAPN1-227ENST00000533909 TNFRSF9Q07011 255 aa10.15□□□□□ -0.78
CAPN1-227ENST00000533909 ANKRD55Q3KP44 614 aa10.15□□□□□ -0.78
CAPN1-227ENST00000533909 UNQ9165/PRO28630Q6UXU0 137 aa10.15□□□□□ -0.78
CAPN1-227ENST00000533909 COQ8AQ8NI60 647 aa10.15□□□□□ -0.78
CAPN1-227ENST00000533909 TMEM190Q8WZ59 177 aa10.15□□□□□ -0.78
CAPN1-227ENST00000533909 CCDC32Q9BV29 185 aa10.15□□□□□ -0.78
CAPN1-227ENST00000533909 ZNF436Q9C0F3 470 aaPredicted RBP10.15□□□□□ -0.78
CAPN1-227ENST00000533909 DAZ1Q9NQZ3 744 aaKnown RBP10.15□□□□□ -0.78
CAPN1-227ENST00000533909 MRPL27Q9P0M9 148 aaKnown RBP10.15□□□□□ -0.78
CAPN1-227ENST00000533909 TMED3Q9Y3Q3 217 aa10.15□□□□□ -0.78
CAPN1-227ENST00000533909 LYRM1O43325 122 aa10.14□□□□□ -0.79
CAPN1-227ENST00000533909 CTSGP08311 255 aa10.14□□□□□ -0.79
CAPN1-227ENST00000533909 HOXB5P09067 269 aa10.14□□□□□ -0.79
CAPN1-227ENST00000533909 NPY1RP25929 384 aa10.14□□□□□ -0.79
CAPN1-227ENST00000533909 FCGR2BP31994 310 aaPredicted RBP10.14□□□□□ -0.79
CAPN1-227ENST00000533909 DEFB114Q30KQ6 69 aa10.14□□□□□ -0.79
CAPN1-227ENST00000533909 RBPMS2Q6ZRY4 209 aaKnown RBP10.14□□□□□ -0.79
CAPN1-227ENST00000533909 LRTM2Q8N967 370 aa10.14□□□□□ -0.79
CAPN1-227ENST00000533909 DTD1Q8TEA8 209 aa10.14□□□□□ -0.79
CAPN1-227ENST00000533909 RBKSQ9H477 322 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms