RNA–Protein interactions for RNA: ENST00000533820.5

CAPN1-226, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-226ENST00000533820 UQCR10Q9UDW1 63 aa15.87■□□□□ 0.13
CAPN1-226ENST00000533820 JPT1Q9UK76 154 aa15.87■□□□□ 0.13
CAPN1-226ENST00000533820 TP53TG3Q9ULZ0 132 aa15.87■□□□□ 0.13
CAPN1-226ENST00000533820 SLC45A2Q9UMX9 530 aa15.87■□□□□ 0.13
CAPN1-226ENST00000533820 NAV3Q8IVL0 2385 aa15.87■□□□□ 0.13
CAPN1-226ENST00000533820 CRISP2P16562 243 aa15.87■□□□□ 0.13
CAPN1-226ENST00000533820 ATOH7Q8N100 152 aa15.87■□□□□ 0.13
CAPN1-226ENST00000533820 OR2D3Q8NGH3 330 aa15.87■□□□□ 0.13
CAPN1-226ENST00000533820 SAMD10Q9BYL1 202 aa15.87■□□□□ 0.13
CAPN1-226ENST00000533820 BET1LQ9NYM9 111 aa15.87■□□□□ 0.13
CAPN1-226ENST00000533820 PIEZO2Q9H5I5 2752 aa15.87■□□□□ 0.13
CAPN1-226ENST00000533820 RIF1Q5UIP0 2472 aaKnown RBP15.86■□□□□ 0.13
CAPN1-226ENST00000533820 SRRM5B3KS81 715 aa15.86■□□□□ 0.13
CAPN1-226ENST00000533820 M0R296 226 aa15.86■□□□□ 0.13
CAPN1-226ENST00000533820 RHOBP62745 196 aa15.86■□□□□ 0.13
CAPN1-226ENST00000533820 ITLN1Q8WWA0 313 aa15.86■□□□□ 0.13
CAPN1-226ENST00000533820 RND1Q92730 232 aa15.86■□□□□ 0.13
CAPN1-226ENST00000533820 SMIM12Q96EX1 92 aa15.86■□□□□ 0.13
CAPN1-226ENST00000533820 RNASE7Q9H1E1 156 aaKnown RBP15.86■□□□□ 0.13
CAPN1-226ENST00000533820 SNURFLB1AK76 121 aa15.86■□□□□ 0.13
CAPN1-226ENST00000533820 SP9P0CG40 484 aa15.86■□□□□ 0.13
CAPN1-226ENST00000533820 TPPP2P59282 170 aa15.86■□□□□ 0.13
CAPN1-226ENST00000533820 STARD4Q96DR4 205 aa15.86■□□□□ 0.13
CAPN1-226ENST00000533820 TRAV30A0A087WSZ9 112 aa15.86■□□□□ 0.13
CAPN1-226ENST00000533820 NDUFS8O00217 210 aa15.86■□□□□ 0.13
CAPN1-226ENST00000533820 OR7C2O60412 319 aa15.86■□□□□ 0.13
CAPN1-226ENST00000533820 MMP23AO75900 390 aa15.86■□□□□ 0.13
CAPN1-226ENST00000533820 NHLRC2Q8NBF2 726 aa15.86■□□□□ 0.13
CAPN1-226ENST00000533820 OR4S2Q8NH73 311 aa15.86■□□□□ 0.13
CAPN1-226ENST00000533820 TRIP6Q15654 476 aaKnown RBP15.85■□□□□ 0.13
CAPN1-226ENST00000533820 PQLC2Q6ZP29 291 aa15.85■□□□□ 0.13
CAPN1-226ENST00000533820 ZC2HC1AQ96GY0 325 aa15.85■□□□□ 0.13
CAPN1-226ENST00000533820 LSM4Q9Y4Z0 139 aaKnown RBP15.85■□□□□ 0.13
CAPN1-226ENST00000533820 ZNF891A8MT65 544 aaPredicted RBP15.85■□□□□ 0.13
CAPN1-226ENST00000533820 IGHV3-48P01763 117 aa15.85■□□□□ 0.13
CAPN1-226ENST00000533820 C15orf61A6NNL5 157 aa15.84■□□□□ 0.13
CAPN1-226ENST00000533820 K7ERU9 68 aa15.84■□□□□ 0.13
CAPN1-226ENST00000533820 WT1P19544 449 aaPredicted RBP15.84■□□□□ 0.13
CAPN1-226ENST00000533820 LINC00310P59036 64 aa15.84■□□□□ 0.13
CAPN1-226ENST00000533820 MMD2Q8IY49 270 aa15.84■□□□□ 0.13
CAPN1-226ENST00000533820 PPP1R35Q8TAP8 253 aa15.84■□□□□ 0.13
CAPN1-226ENST00000533820 UHRF2Q96PU4 802 aa15.84■□□□□ 0.13
CAPN1-226ENST00000533820 WNT10AQ9GZT5 417 aa15.84■□□□□ 0.13
CAPN1-226ENST00000533820 DIRC3C9JPN6 131 aa15.84■□□□□ 0.13
CAPN1-226ENST00000533820 IGKV1-16P04430 117 aa15.84■□□□□ 0.13
CAPN1-226ENST00000533820 IGLC2P0DOY2 106 aa15.84■□□□□ 0.13
CAPN1-226ENST00000533820 IGLC3P0DOY3 106 aa15.84■□□□□ 0.13
CAPN1-226ENST00000533820 COMPP49747 757 aaPredicted RBP15.84■□□□□ 0.13
CAPN1-226ENST00000533820 BHLHA15Q7RTS1 189 aaPredicted RBP15.84■□□□□ 0.13
CAPN1-226ENST00000533820 EAF1Q96JC9 268 aaPredicted RBP15.84■□□□□ 0.13
CAPN1-226ENST00000533820 RAB31Q13636 194 aa15.83■□□□□ 0.13
CAPN1-226ENST00000533820 CENPWQ5EE01 88 aa15.83■□□□□ 0.13
CAPN1-226ENST00000533820 PRR31Q5SQ13 230 aa15.83■□□□□ 0.13
CAPN1-226ENST00000533820 TRAT1Q6PIZ9 186 aa15.83■□□□□ 0.13
CAPN1-226ENST00000533820 RPRMLQ8N4K4 120 aa15.83■□□□□ 0.13
CAPN1-226ENST00000533820 OR5AU1Q8NGC0 362 aa15.83■□□□□ 0.13
CAPN1-226ENST00000533820 SERTAD4Q9NUC0 356 aa15.83■□□□□ 0.13
CAPN1-226ENST00000533820 IL36BQ9NZH7 164 aa15.83■□□□□ 0.13
CAPN1-226ENST00000533820 OR51B2Q9Y5P1 312 aa15.83■□□□□ 0.13
CAPN1-226ENST00000533820 GNG7O60262 68 aa15.83■□□□□ 0.12
CAPN1-226ENST00000533820 MGST1P10620 155 aaKnown RBP15.83■□□□□ 0.12
CAPN1-226ENST00000533820 HSPE1P61604 102 aaKnown RBP15.83■□□□□ 0.12
CAPN1-226ENST00000533820 PROCRQ9UNN8 238 aa15.83■□□□□ 0.12
CAPN1-226ENST00000533820 OR4B1Q8NGF8 309 aa15.83■□□□□ 0.12
CAPN1-226ENST00000533820 IDI2-AS1Q9NZ38 188 aa15.83■□□□□ 0.12
CAPN1-226ENST00000533820 CA1P00915 261 aaPredicted RBP15.82■□□□□ 0.12
CAPN1-226ENST00000533820 GNG4P50150 75 aa15.82■□□□□ 0.12
CAPN1-226ENST00000533820 C17orf58Q2M2W7 97 aa15.82■□□□□ 0.12
CAPN1-226ENST00000533820 OR10W1Q8NGF6 305 aa15.82■□□□□ 0.12
CAPN1-226ENST00000533820 CCL13Q99616 98 aa15.82■□□□□ 0.12
CAPN1-226ENST00000533820 ZNF71Q9NQZ8 489 aaPredicted RBP15.82■□□□□ 0.12
CAPN1-226ENST00000533820 FBXL7Q9UJT9 491 aa15.82■□□□□ 0.12
CAPN1-226ENST00000533820 J3QR06 171 aa15.82■□□□□ 0.12
CAPN1-226ENST00000533820 GUSBP1Q15486 140 aa15.82■□□□□ 0.12
CAPN1-226ENST00000533820 MRPL54Q6P161 138 aaKnown RBP15.82■□□□□ 0.12
CAPN1-226ENST00000533820 FAM216BQ8N7L0 139 aa15.82■□□□□ 0.12
CAPN1-226ENST00000533820 OR9G1Q8NH87 305 aa15.82■□□□□ 0.12
CAPN1-226ENST00000533820 NABP2Q9BQ15 211 aa15.82■□□□□ 0.12
CAPN1-226ENST00000533820 NAT8BQ9UHF3 227 aa15.82■□□□□ 0.12
CAPN1-226ENST00000533820 IGKV1OR2-108A0A075B7D4 117 aa15.81■□□□□ 0.12
CAPN1-226ENST00000533820 HELTA6NFD8 242 aa15.81■□□□□ 0.12
CAPN1-226ENST00000533820 MBNL2Q5VZF2 373 aaKnown RBP15.81■□□□□ 0.12
CAPN1-226ENST00000533820 OR52E5Q8NH55 327 aa15.81■□□□□ 0.12
CAPN1-226ENST00000533820 DDB2Q92466 427 aa15.81■□□□□ 0.12
CAPN1-226ENST00000533820 PRR33A8MZF0 331 aa15.81■□□□□ 0.12
CAPN1-226ENST00000533820 IGHG3P01860 377 aa15.81■□□□□ 0.12
CAPN1-226ENST00000533820 YPEL3P61236 119 aaPredicted RBP15.81■□□□□ 0.12
CAPN1-226ENST00000533820 RPEL1Q2QD12 228 aa15.81■□□□□ 0.12
CAPN1-226ENST00000533820 PLEKHA3Q9HB20 300 aa15.81■□□□□ 0.12
CAPN1-226ENST00000533820 IGLV1-44P01699 117 aa15.81■□□□□ 0.12
CAPN1-226ENST00000533820 TMPRSS3P57727 454 aa15.81■□□□□ 0.12
CAPN1-226ENST00000533820 SRRM4A7MD48 611 aaKnown RBP15.8■□□□□ 0.12
CAPN1-226ENST00000533820 TMEM249Q2WGJ8 235 aa15.8■□□□□ 0.12
CAPN1-226ENST00000533820 SARAFQ96BY9 339 aa15.8■□□□□ 0.12
CAPN1-226ENST00000533820 KALRNO60229 2985 aa15.8■□□□□ 0.12
CAPN1-226ENST00000533820 F2RL2O00254 374 aa15.8■□□□□ 0.12
CAPN1-226ENST00000533820 MT-CO2P00403 227 aa15.8■□□□□ 0.12
CAPN1-226ENST00000533820 LINC00869P0C866 280 aa15.8■□□□□ 0.12
CAPN1-226ENST00000533820 REG1BP48304 166 aa15.8■□□□□ 0.12
CAPN1-226ENST00000533820 AMMECR1LQ6DCA0 310 aa15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms