RNA–Protein interactions for RNA: ENST00000533644.5

BBS1-223, Transcript of Bardet-Biedl syndrome 1, human

TSL 3

Gene BBS1, Length 910 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BBS1-223	ENST00000533644	PRRT1	Q99946	306 aa		13.27	□□□□□ -0.29
BBS1-223	ENST00000533644	TMEM222	Q9H0R3	208 aa		13.27	□□□□□ -0.29
BBS1-223	ENST00000533644	WFDC10A	Q9H1F0	79 aa		13.27	□□□□□ -0.29
BBS1-223	ENST00000533644	C14orf166	Q9Y224	244 aa	Known RBP	13.27	□□□□□ -0.29
BBS1-223	ENST00000533644	SACS	Q9NZJ4	4579 aa		13.27	□□□□□ -0.29
BBS1-223	ENST00000533644		A0A0G2JRQ6	117 aa		13.26	□□□□□ -0.29
BBS1-223	ENST00000533644	ST8SIA3	O43173	380 aa		13.26	□□□□□ -0.29
BBS1-223	ENST00000533644	CDS2	O95674	445 aa		13.26	□□□□□ -0.29
BBS1-223	ENST00000533644	OR5AC1	P0C628	307 aa		13.26	□□□□□ -0.29
BBS1-223	ENST00000533644	ERH	P84090	104 aa	Known RBP	13.26	□□□□□ -0.29
BBS1-223	ENST00000533644	AARD	Q4LEZ3	155 aa		13.26	□□□□□ -0.29
BBS1-223	ENST00000533644	PVRIG	Q6DKI7	326 aa		13.26	□□□□□ -0.29
BBS1-223	ENST00000533644	SLC16A13	Q7RTY0	426 aa		13.26	□□□□□ -0.29
BBS1-223	ENST00000533644	DEFB125	Q8N687	156 aa		13.26	□□□□□ -0.29
BBS1-223	ENST00000533644	UBAC2	Q8NBM4	344 aa		13.26	□□□□□ -0.29
BBS1-223	ENST00000533644	MCFD2	Q8NI22	146 aa		13.26	□□□□□ -0.29
BBS1-223	ENST00000533644	CITED4	Q96RK1	184 aa		13.26	□□□□□ -0.29
BBS1-223	ENST00000533644	TXN2	Q99757	166 aa		13.26	□□□□□ -0.29
BBS1-223	ENST00000533644	NAA60	Q9H7X0	242 aa		13.26	□□□□□ -0.29
BBS1-223	ENST00000533644	GPR132	Q9UNW8	380 aa		13.26	□□□□□ -0.29
BBS1-223	ENST00000533644	OR11H12	B2RN74	326 aa		13.25	□□□□□ -0.29
BBS1-223	ENST00000533644		K7EMT4	169 aa		13.25	□□□□□ -0.29
BBS1-223	ENST00000533644	SCAF4	O95104	1147 aa	Known RBP	13.25	□□□□□ -0.29
BBS1-223	ENST00000533644	MT-CO2	P00403	227 aa		13.25	□□□□□ -0.29
BBS1-223	ENST00000533644	MFAP4	P55083	255 aa		13.25	□□□□□ -0.29
BBS1-223	ENST00000533644	SPINK9	Q5DT21	86 aa		13.25	□□□□□ -0.29
BBS1-223	ENST00000533644	FAM219A	Q8IW50	185 aa		13.25	□□□□□ -0.29
BBS1-223	ENST00000533644	SLC35G3	Q8N808	338 aa		13.25	□□□□□ -0.29
BBS1-223	ENST00000533644	OR51S1	Q8NGJ8	323 aa		13.25	□□□□□ -0.29
BBS1-223	ENST00000533644	LHFPL5	Q8TAF8	219 aa		13.25	□□□□□ -0.29
BBS1-223	ENST00000533644	MUC7	Q8TAX7	377 aa		13.25	□□□□□ -0.29
BBS1-223	ENST00000533644	GLYATL2	Q8WU03	294 aa		13.25	□□□□□ -0.29
BBS1-223	ENST00000533644	RRNAD1	Q96FB5	475 aa	Known RBP	13.25	□□□□□ -0.29
BBS1-223	ENST00000533644	SRD5A3	Q9H8P0	318 aa		13.25	□□□□□ -0.29
BBS1-223	ENST00000533644	EDA2R	Q9HAV5	297 aa		13.25	□□□□□ -0.29
BBS1-223	ENST00000533644	TEX13D	A0A0J9YY54	714 aa	Predicted RBP	13.24	□□□□□ -0.29
BBS1-223	ENST00000533644	RBMY1B	A6NDE4	496 aa	Known RBP	13.24	□□□□□ -0.29
BBS1-223	ENST00000533644	RBMY1E	A6NEQ0	496 aa	Known RBP	13.24	□□□□□ -0.29
BBS1-223	ENST00000533644	FABP12	A6NFH5	140 aa		13.24	□□□□□ -0.29
BBS1-223	ENST00000533644	CRYM-AS1	A6NIL9	109 aa		13.24	□□□□□ -0.29
BBS1-223	ENST00000533644	C15orf62	A8K5M9	175 aa		13.24	□□□□□ -0.29
BBS1-223	ENST00000533644	IFNA17	P01571	189 aa		13.24	□□□□□ -0.29
BBS1-223	ENST00000533644	RBMY1D	P0C7P1	496 aa	Known RBP	13.24	□□□□□ -0.29
BBS1-223	ENST00000533644	ANKRD55	Q3KP44	614 aa		13.24	□□□□□ -0.29
BBS1-223	ENST00000533644		Q6ZRM9	215 aa		13.24	□□□□□ -0.29
BBS1-223	ENST00000533644	OR52B4	Q8NGK2	314 aa		13.24	□□□□□ -0.29
BBS1-223	ENST00000533644	EPPK1	P58107	5090 aa	Known RBP	13.23	□□□□□ -0.29
BBS1-223	ENST00000533644	NUPL2	O15504	423 aa	Known RBP	13.23	□□□□□ -0.29
BBS1-223	ENST00000533644	SNCA	P37840	140 aa		13.23	□□□□□ -0.29
BBS1-223	ENST00000533644	DHODH	Q02127	395 aa		13.23	□□□□□ -0.29
BBS1-223	ENST00000533644	REL	Q04864	619 aa	Predicted RBP	13.23	□□□□□ -0.29
BBS1-223	ENST00000533644	RBPMS2	Q6ZRY4	209 aa	Known RBP	13.23	□□□□□ -0.29
BBS1-223	ENST00000533644	RBPMS	Q93062	196 aa	Known RBP	13.23	□□□□□ -0.29
BBS1-223	ENST00000533644	PINX1	Q96BK5	328 aa	Known RBP	13.23	□□□□□ -0.29
BBS1-223	ENST00000533644	SPAG8	Q99932	426 aa	Predicted RBP	13.23	□□□□□ -0.29
BBS1-223	ENST00000533644	PDCD10	Q9BUL8	212 aa		13.23	□□□□□ -0.29
BBS1-223	ENST00000533644	C20orf24	Q9BUV8	137 aa		13.23	□□□□□ -0.29
BBS1-223	ENST00000533644	HIPK2	Q9H2X6	1198 aa		13.23	□□□□□ -0.29
BBS1-223	ENST00000533644	IGHV3OR16-8	A0A075B7F1	116 aa		13.22	□□□□□ -0.29
BBS1-223	ENST00000533644	TSPAN4	O14817	238 aa		13.22	□□□□□ -0.29
BBS1-223	ENST00000533644	IGHV3-48	P01763	117 aa		13.22	□□□□□ -0.29
BBS1-223	ENST00000533644	RNASE2	P10153	161 aa	Known RBP	13.22	□□□□□ -0.29
BBS1-223	ENST00000533644	ETV6	P41212	452 aa		13.22	□□□□□ -0.29
BBS1-223	ENST00000533644	BSX	Q3C1V8	233 aa		13.22	□□□□□ -0.29
BBS1-223	ENST00000533644	SELENOH	Q8IZQ5	122 aa	Known RBP	13.22	□□□□□ -0.29
BBS1-223	ENST00000533644	RNASE11	Q8TAA1	199 aa	Known RBP	13.22	□□□□□ -0.29
BBS1-223	ENST00000533644	TMEM230	Q96A57	120 aa		13.22	□□□□□ -0.29
BBS1-223	ENST00000533644	OR10C1	Q96KK4	312 aa		13.22	□□□□□ -0.29
BBS1-223	ENST00000533644	RBM38	Q9H0Z9	239 aa	Known RBP	13.22	□□□□□ -0.29
BBS1-223	ENST00000533644	SCP2D1	Q9UJQ7	156 aa		13.22	□□□□□ -0.29
BBS1-223	ENST00000533644	TMEM56-RWDD3	S4R434	201 aa		13.22	□□□□□ -0.29
BBS1-223	ENST00000533644	CORT	O00230	105 aa		13.21	□□□□□ -0.29
BBS1-223	ENST00000533644	HOXA1	P49639	335 aa	Predicted RBP	13.21	□□□□□ -0.29
BBS1-223	ENST00000533644	SPCS3	P61009	180 aa		13.21	□□□□□ -0.29
BBS1-223	ENST00000533644	OR52E5	Q8NH55	327 aa		13.21	□□□□□ -0.29
BBS1-223	ENST00000533644	TRIM63	Q969Q1	353 aa		13.21	□□□□□ -0.29
BBS1-223	ENST00000533644	GALNT14	Q96FL9	552 aa		13.21	□□□□□ -0.29
BBS1-223	ENST00000533644		V9GYH0	126 aa		13.21	□□□□□ -0.29
BBS1-223	ENST00000533644	ZNF207	O43670	478 aa	Known RBP	13.2	□□□□□ -0.3
BBS1-223	ENST00000533644	GNG7	O60262	68 aa		13.2	□□□□□ -0.3
BBS1-223	ENST00000533644	SUB1	P53999	127 aa	Known RBP eCLIP	13.2	□□□□□ -0.3
BBS1-223	ENST00000533644	KLF9	Q13886	244 aa	Predicted RBP	13.2	□□□□□ -0.3
BBS1-223	ENST00000533644	CASC10	Q5T4H9	136 aa		13.2	□□□□□ -0.3
BBS1-223	ENST00000533644	TMEM268	Q5VZI3	342 aa		13.2	□□□□□ -0.3
BBS1-223	ENST00000533644	IL22RA2	Q969J5	263 aa		13.2	□□□□□ -0.3
BBS1-223	ENST00000533644	SCGB3A2	Q96PL1	93 aa		13.2	□□□□□ -0.3
BBS1-223	ENST00000533644	RETN	Q9HD89	108 aa		13.2	□□□□□ -0.3
BBS1-223	ENST00000533644	CTNNBIP1	Q9NSA3	81 aa	Predicted RBP	13.2	□□□□□ -0.3
BBS1-223	ENST00000533644	CACNG5	Q9UF02	275 aa		13.2	□□□□□ -0.3
BBS1-223	ENST00000533644	SMPX	Q9UHP9	88 aa		13.2	□□□□□ -0.3
BBS1-223	ENST00000533644	IGHV7-4-1	A0A0J9YVY3	117 aa		13.19	□□□□□ -0.3
BBS1-223	ENST00000533644	NPBWR1	P48145	328 aa		13.19	□□□□□ -0.3
BBS1-223	ENST00000533644	TMEM187	Q14656	261 aa		13.19	□□□□□ -0.3
BBS1-223	ENST00000533644	LAMTOR1	Q6IAA8	161 aa		13.19	□□□□□ -0.3
BBS1-223	ENST00000533644	DUSP18	Q8NEJ0	188 aa		13.19	□□□□□ -0.3
BBS1-223	ENST00000533644	GPR146	Q96CH1	333 aa		13.19	□□□□□ -0.3
BBS1-223	ENST00000533644	ENY2	Q9NPA8	101 aa		13.19	□□□□□ -0.3
BBS1-223	ENST00000533644	MCUB	Q9NWR8	336 aa		13.19	□□□□□ -0.3
BBS1-223	ENST00000533644	ZNF701	M0R085	212 aa	Predicted RBP	13.18	□□□□□ -0.3
BBS1-223	ENST00000533644	CHEK1	O14757	476 aa		13.18	□□□□□ -0.3

Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms