RNA–Protein interactions for RNA: ENST00000533249.5

PKP3-210, Transcript of plakophilin 3, humanhuman

TSL 3

Gene PKP3, Length 1,111 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-210ENST00000533249 TMEM140Q9NV12 185 aa17.03■□□□□ 0.32
PKP3-210ENST00000533249 THYN1Q9P016 225 aa17.03■□□□□ 0.32
PKP3-210ENST00000533249 TRAV6A0A075B6T7 132 aa17.02■□□□□ 0.32
PKP3-210ENST00000533249 CXorf65A6NEN9 183 aa17.02■□□□□ 0.32
PKP3-210ENST00000533249 S1PR2O95136 353 aa17.02■□□□□ 0.32
PKP3-210ENST00000533249 ELLP55199 621 aaPredicted RBP17.02■□□□□ 0.32
PKP3-210ENST00000533249 POU2AF1Q16633 256 aa17.02■□□□□ 0.32
PKP3-210ENST00000533249 PHLDA2Q53GA4 152 aa17.02■□□□□ 0.32
PKP3-210ENST00000533249 ZNF818PQ6ZRF7 136 aa17.02■□□□□ 0.32
PKP3-210ENST00000533249 OR2C3Q8N628 320 aa17.02■□□□□ 0.32
PKP3-210ENST00000533249 CCDC71LQ8N9Z2 235 aa17.02■□□□□ 0.32
PKP3-210ENST00000533249 LINC00476Q8WZB0 136 aa17.02■□□□□ 0.32
PKP3-210ENST00000533249 QTRT1Q9BXR0 403 aaKnown RBP17.02■□□□□ 0.32
PKP3-210ENST00000533249 UBQLN2Q9UHD9 624 aa17.02■□□□□ 0.32
PKP3-210ENST00000533249 TGOLN2O43493 480 aa17.01■□□□□ 0.31
PKP3-210ENST00000533249 CTSDP07339 412 aaPredicted RBP17.01■□□□□ 0.31
PKP3-210ENST00000533249 H2AFB2P0C5Z0 115 aa17.01■□□□□ 0.31
PKP3-210ENST00000533249 PI3P19957 117 aa17.01■□□□□ 0.31
PKP3-210ENST00000533249 CENPSQ8N2Z9 138 aa17.01■□□□□ 0.31
PKP3-210ENST00000533249 ZNF486Q96H40 463 aaPredicted RBP17.01■□□□□ 0.31
PKP3-210ENST00000533249 SRSF8Q9BRL6 282 aaKnown RBP17.01■□□□□ 0.31
PKP3-210ENST00000533249 C20orf85Q9H1P6 137 aa17.01■□□□□ 0.31
PKP3-210ENST00000533249 NUDT15Q9NV35 164 aa17.01■□□□□ 0.31
PKP3-210ENST00000533249 GPR132Q9UNW8 380 aa17.01■□□□□ 0.31
PKP3-210ENST00000533249 A0A0J9YWU9 116 aa17■□□□□ 0.31
PKP3-210ENST00000533249 OR2T8A6NH00 312 aa17■□□□□ 0.31
PKP3-210ENST00000533249 GNRHRP30968 328 aa17■□□□□ 0.31
PKP3-210ENST00000533249 DUSP18Q8NEJ0 188 aa17■□□□□ 0.31
PKP3-210ENST00000533249 ZNF436Q9C0F3 470 aaPredicted RBP17■□□□□ 0.31
PKP3-210ENST00000533249 C5orf66Q9H5L9 145 aa17■□□□□ 0.31
PKP3-210ENST00000533249 PLEKHA2Q9HB19 425 aa17■□□□□ 0.31
PKP3-210ENST00000533249 FLVCR2Q9UPI3 526 aa17■□□□□ 0.31
PKP3-210ENST00000533249 TEX13DA0A0J9YY54 714 aaPredicted RBP16.99■□□□□ 0.31
PKP3-210ENST00000533249 CYB5BO43169 146 aa16.99■□□□□ 0.31
PKP3-210ENST00000533249 LY6G6CO95867 125 aa16.99■□□□□ 0.31
PKP3-210ENST00000533249 TRAPPC2P0DI81 140 aa16.99■□□□□ 0.31
PKP3-210ENST00000533249 TRAPPC2BP0DI82 140 aa16.99■□□□□ 0.31
PKP3-210ENST00000533249 OR13C7P0DN81 318 aa16.99■□□□□ 0.31
PKP3-210ENST00000533249 AKR1C4P17516 323 aa16.99■□□□□ 0.31
PKP3-210ENST00000533249 APOC4P55056 127 aa16.99■□□□□ 0.31
PKP3-210ENST00000533249 PIGPP57054 158 aa16.99■□□□□ 0.31
PKP3-210ENST00000533249 EWSR1Q01844 656 aaKnown RBP eCLIP16.99■□□□□ 0.317e-6■■■□□ 16.7
PKP3-210ENST00000533249 DEFB135Q30KP9 77 aa16.99■□□□□ 0.31
PKP3-210ENST00000533249 SLC25A24Q6NUK1 477 aa16.99■□□□□ 0.31
PKP3-210ENST00000533249 CD300LFQ8TDQ1 290 aa16.99■□□□□ 0.31
PKP3-210ENST00000533249 VN1R17PQ8TDU5 208 aa16.99■□□□□ 0.31
PKP3-210ENST00000533249 TMEM190Q8WZ59 177 aa16.99■□□□□ 0.31
PKP3-210ENST00000533249 MRGPRFQ96AM1 343 aa16.99■□□□□ 0.31
PKP3-210ENST00000533249 SPAG8Q99932 426 aaPredicted RBP16.99■□□□□ 0.31
PKP3-210ENST00000533249 IGHV3-21A0A0B4J1V1 117 aa16.98■□□□□ 0.31
PKP3-210ENST00000533249 SPRY2O43597 315 aa16.98■□□□□ 0.31
PKP3-210ENST00000533249 WT1-ASQ06250 92 aa16.98■□□□□ 0.31
PKP3-210ENST00000533249 LYG2Q86SG7 212 aa16.98■□□□□ 0.31
PKP3-210ENST00000533249 HINT2Q9BX68 163 aa16.98■□□□□ 0.31
PKP3-210ENST00000533249 COMMD9Q9P000 198 aa16.98■□□□□ 0.31
PKP3-210ENST00000533249 TEX50A0A1B0GTY4 177 aa16.97■□□□□ 0.31
PKP3-210ENST00000533249 INMT-MINDY4F8WBC2 141 aa16.97■□□□□ 0.31
PKP3-210ENST00000533249 SERPINE2P07093 398 aa16.97■□□□□ 0.31
PKP3-210ENST00000533249 ERVK-16P61578 105 aa16.97■□□□□ 0.31
PKP3-210ENST00000533249 RTBDNQ9BSG5 229 aaPredicted RBP16.97■□□□□ 0.31
PKP3-210ENST00000533249 C20orf24Q9BUV8 137 aa16.97■□□□□ 0.31
PKP3-210ENST00000533249 DAZ1Q9NQZ3 744 aaKnown RBP16.97■□□□□ 0.31
PKP3-210ENST00000533249 IGHV3OR16-8A0A075B7F1 116 aa16.96■□□□□ 0.31
PKP3-210ENST00000533249 TSPAN4O14817 238 aa16.96■□□□□ 0.31
PKP3-210ENST00000533249 PGLYRP1O75594 196 aaPredicted RBP16.96■□□□□ 0.31
PKP3-210ENST00000533249 BMI1P35226 326 aa16.96■□□□□ 0.31
PKP3-210ENST00000533249 C4orf46Q504U0 113 aa16.96■□□□□ 0.31
PKP3-210ENST00000533249 THOC7Q6I9Y2 204 aaKnown RBP16.96■□□□□ 0.31
PKP3-210ENST00000533249 LAMTOR1Q6IAA8 161 aa16.96■□□□□ 0.31
PKP3-210ENST00000533249 Q6ZWC4 215 aa16.96■□□□□ 0.31
PKP3-210ENST00000533249 TBC1D26Q86UD7 250 aa16.96■□□□□ 0.31
PKP3-210ENST00000533249 WFDC3Q8IUB2 231 aa16.96■□□□□ 0.31
PKP3-210ENST00000533249 OR1L8Q8NGR8 309 aa16.96■□□□□ 0.31
PKP3-210ENST00000533249 BSCL2Q96G97 398 aaPredicted RBP16.96■□□□□ 0.31
PKP3-210ENST00000533249 TP53TG1Q9Y2A0 90 aa16.96■□□□□ 0.31
PKP3-210ENST00000533249 KCNIP3Q9Y2W7 256 aa16.96■□□□□ 0.31
PKP3-210ENST00000533249 NUPR2A6NF83 97 aa16.95■□□□□ 0.3
PKP3-210ENST00000533249 MARCH11A6NNE9 402 aa16.95■□□□□ 0.3
PKP3-210ENST00000533249 ZNF207O43670 478 aaKnown RBP16.95■□□□□ 0.3
PKP3-210ENST00000533249 FGF2P09038 288 aa16.95■□□□□ 0.3
PKP3-210ENST00000533249 ANXA7P20073 488 aaKnown RBP16.95■□□□□ 0.3
PKP3-210ENST00000533249 VAMP1P23763 118 aa16.95■□□□□ 0.3
PKP3-210ENST00000533249 MFAP2P55001 183 aa16.95■□□□□ 0.3
PKP3-210ENST00000533249 RND3P61587 244 aa16.95■□□□□ 0.3
PKP3-210ENST00000533249 TNFRSF9Q07011 255 aa16.95■□□□□ 0.3
PKP3-210ENST00000533249 ODF3L2Q3SX64 289 aa16.95■□□□□ 0.3
PKP3-210ENST00000533249 HSD17B13Q7Z5P4 300 aaPredicted RBP16.95■□□□□ 0.3
PKP3-210ENST00000533249 UBAC2Q8NBM4 344 aa16.95■□□□□ 0.3
PKP3-210ENST00000533249 CHRDL1Q9BU40 450 aa16.95■□□□□ 0.3
PKP3-210ENST00000533249 C21orf62Q9NYP8 219 aa16.95■□□□□ 0.3
PKP3-210ENST00000533249 NSG2Q9Y328 171 aa16.95■□□□□ 0.3
PKP3-210ENST00000533249 ANXA3P12429 323 aa16.94■□□□□ 0.3
PKP3-210ENST00000533249 RPL35AP18077 110 aaKnown RBP16.94■□□□□ 0.3
PKP3-210ENST00000533249 UBE2MP61081 183 aaKnown RBP16.94■□□□□ 0.3
PKP3-210ENST00000533249 OXA1LQ15070 435 aa16.94■□□□□ 0.3
PKP3-210ENST00000533249 F11RQ9Y624 299 aaKnown RBP16.94■□□□□ 0.3
PKP3-210ENST00000533249 NDUFA4O00483 81 aa16.93■□□□□ 0.3
PKP3-210ENST00000533249 UBE2CO00762 179 aa16.93■□□□□ 0.3
PKP3-210ENST00000533249 KRASP01116 189 aa16.93■□□□□ 0.3
PKP3-210ENST00000533249 F2RP25116 425 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms