RNA–Protein interactions for RNA: ENST00000533242.1

NEDD8-207, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 1 (best)

Gene NEDD8, Length 2,300 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-207ENST00000533242 GNG12Q9UBI6 72 aa6.57□□□□□ -1.36
NEDD8-207ENST00000533242 SIGLEC9Q9Y336 463 aa6.57□□□□□ -1.36
NEDD8-207ENST00000533242 PIGBOS1A0A0B4J2F0 54 aa6.56□□□□□ -1.36
NEDD8-207ENST00000533242 M0R1X1 148 aa6.56□□□□□ -1.36
NEDD8-207ENST00000533242 SPINT2O43291 252 aa6.56□□□□□ -1.36
NEDD8-207ENST00000533242 LHBP01229 141 aa6.56□□□□□ -1.36
NEDD8-207ENST00000533242 S100A6P06703 90 aa6.56□□□□□ -1.36
NEDD8-207ENST00000533242 FGF7P21781 194 aa6.56□□□□□ -1.36
NEDD8-207ENST00000533242 GPR12P47775 334 aa6.56□□□□□ -1.36
NEDD8-207ENST00000533242 PAX5Q02548 391 aa6.56□□□□□ -1.36
NEDD8-207ENST00000533242 MZT1Q08AG7 82 aa6.56□□□□□ -1.36
NEDD8-207ENST00000533242 MSMO1Q15800 293 aa6.56□□□□□ -1.36
NEDD8-207ENST00000533242 ZNF66Q6ZN08 573 aa6.56□□□□□ -1.36
NEDD8-207ENST00000533242 C1orf122Q6ZSJ8 110 aa6.56□□□□□ -1.36
NEDD8-207ENST00000533242 SLC35E3Q7Z769 313 aa6.56□□□□□ -1.36
NEDD8-207ENST00000533242 NPCDR1Q9BY65 106 aa6.56□□□□□ -1.36
NEDD8-207ENST00000533242 A0A087WWC5 75 aa6.56□□□□□ -1.36
NEDD8-207ENST00000533242 RRHO14718 337 aa6.56□□□□□ -1.36
NEDD8-207ENST00000533242 MMP23AO75900 390 aa6.56□□□□□ -1.36
NEDD8-207ENST00000533242 YIF1AO95070 293 aa6.56□□□□□ -1.36
NEDD8-207ENST00000533242 CGB3P0DN86 165 aa6.56□□□□□ -1.36
NEDD8-207ENST00000533242 CGB7P0DN87 165 aa6.56□□□□□ -1.36
NEDD8-207ENST00000533242 MYOD1P15172 320 aa6.56□□□□□ -1.36
NEDD8-207ENST00000533242 C17orf58Q2M2W7 97 aa6.56□□□□□ -1.36
NEDD8-207ENST00000533242 IQCF2Q8IXL9 164 aa6.56□□□□□ -1.36
NEDD8-207ENST00000533242 BEND2Q8NDZ0 799 aa6.56□□□□□ -1.36
NEDD8-207ENST00000533242 OR10G4Q8NGN3 311 aa6.56□□□□□ -1.36
NEDD8-207ENST00000533242 OR2T6Q8NHC8 308 aa6.56□□□□□ -1.36
NEDD8-207ENST00000533242 C8orf46Q8TAG6 207 aa6.56□□□□□ -1.36
NEDD8-207ENST00000533242 HSD17B10Q99714 261 aaKnown RBP6.56□□□□□ -1.36
NEDD8-207ENST00000533242 TMEM147Q9BVK8 224 aa6.56□□□□□ -1.36
NEDD8-207ENST00000533242 SIRT7Q9NRC8 400 aa6.56□□□□□ -1.36
NEDD8-207ENST00000533242 OR6C3Q9NZP0 311 aa6.56□□□□□ -1.36
NEDD8-207ENST00000533242 METTL1Q9UBP6 276 aaKnown RBP6.56□□□□□ -1.36
NEDD8-207ENST00000533242 MGST3O14880 152 aa6.55□□□□□ -1.36
NEDD8-207ENST00000533242 CLN5O75503 358 aa6.55□□□□□ -1.36
NEDD8-207ENST00000533242 VWC2Q2TAL6 325 aa6.55□□□□□ -1.36
NEDD8-207ENST00000533242 CT45A1Q5HYN5 189 aa6.55□□□□□ -1.36
NEDD8-207ENST00000533242 FFAR4Q5NUL3 377 aa6.55□□□□□ -1.36
NEDD8-207ENST00000533242 C11orf44Q8N8P7 122 aa6.55□□□□□ -1.36
NEDD8-207ENST00000533242 OR10P1Q8NGE3 313 aa6.55□□□□□ -1.36
NEDD8-207ENST00000533242 OR10G9Q8NGN4 311 aa6.55□□□□□ -1.36
NEDD8-207ENST00000533242 OR10G7Q8NGN6 311 aa6.55□□□□□ -1.36
NEDD8-207ENST00000533242 CT45A3Q8NHU0 189 aa6.55□□□□□ -1.36
NEDD8-207ENST00000533242 PPP1R35Q8TAP8 253 aa6.55□□□□□ -1.36
NEDD8-207ENST00000533242 RAB24Q969Q5 203 aa6.55□□□□□ -1.36
NEDD8-207ENST00000533242 SNX22Q96L94 193 aa6.55□□□□□ -1.36
NEDD8-207ENST00000533242 SEBOXQ9HB31 216 aaPredicted RBP6.55□□□□□ -1.36
NEDD8-207ENST00000533242 SDF2L1Q9HCN8 221 aa6.55□□□□□ -1.36
NEDD8-207ENST00000533242 SLC39A9Q9NUM3 307 aa6.55□□□□□ -1.36
NEDD8-207ENST00000533242 VAX2Q9UIW0 290 aa6.55□□□□□ -1.36
NEDD8-207ENST00000533242 A0A1W2PRD5 423 aa6.55□□□□□ -1.36
NEDD8-207ENST00000533242 A0A1W2PRF3 423 aa6.55□□□□□ -1.36
NEDD8-207ENST00000533242 A0A1W2PRM7 423 aa6.55□□□□□ -1.36
NEDD8-207ENST00000533242 H3BUX3 64 aa6.55□□□□□ -1.36
NEDD8-207ENST00000533242 F2RL2O00254 374 aa6.55□□□□□ -1.36
NEDD8-207ENST00000533242 CYB5BO43169 146 aa6.55□□□□□ -1.36
NEDD8-207ENST00000533242 NDUFB3O43676 98 aa6.55□□□□□ -1.36
NEDD8-207ENST00000533242 NPPCP23582 126 aa6.55□□□□□ -1.36
NEDD8-207ENST00000533242 SAA4P35542 130 aa6.55□□□□□ -1.36
NEDD8-207ENST00000533242 UBE2E1P51965 193 aa6.55□□□□□ -1.36
NEDD8-207ENST00000533242 KLRD1Q13241 179 aa6.55□□□□□ -1.36
NEDD8-207ENST00000533242 ZNF674Q2M3X9 581 aa6.55□□□□□ -1.36
NEDD8-207ENST00000533242 NDUFA11Q86Y39 141 aa6.55□□□□□ -1.36
NEDD8-207ENST00000533242 ABHD12Q8N2K0 398 aa6.55□□□□□ -1.36
NEDD8-207ENST00000533242 FAM216BQ8N7L0 139 aa6.55□□□□□ -1.36
NEDD8-207ENST00000533242 OR4F17Q8NGA8 305 aa6.55□□□□□ -1.36
NEDD8-207ENST00000533242 DDB2Q92466 427 aa6.55□□□□□ -1.36
NEDD8-207ENST00000533242 TNFRSF14Q92956 283 aa6.55□□□□□ -1.36
NEDD8-207ENST00000533242 PINX1Q96BK5 328 aaKnown RBP6.55□□□□□ -1.36
NEDD8-207ENST00000533242 OR4F4Q96R69 305 aa6.55□□□□□ -1.36
NEDD8-207ENST00000533242 CCL13Q99616 98 aa6.55□□□□□ -1.36
NEDD8-207ENST00000533242 ZNF251Q9BRH9 671 aa6.55□□□□□ -1.36
NEDD8-207ENST00000533242 CALYQ9NYX4 217 aa6.55□□□□□ -1.36
NEDD8-207ENST00000533242 JPT1Q9UK76 154 aa6.55□□□□□ -1.36
NEDD8-207ENST00000533242 TIMM9Q9Y5J7 89 aa6.55□□□□□ -1.36
NEDD8-207ENST00000533242 SAA2-SAA4A0A096LPE2 208 aa6.54□□□□□ -1.36
NEDD8-207ENST00000533242 PRSS46E5RG02 174 aa6.54□□□□□ -1.36
NEDD8-207ENST00000533242 AP4M1O00189 453 aa6.54□□□□□ -1.36
NEDD8-207ENST00000533242 YPEL1O60688 119 aa6.54□□□□□ -1.36
NEDD8-207ENST00000533242 HIST1H2BKO60814 126 aa6.54□□□□□ -1.36
NEDD8-207ENST00000533242 IFNA17P01571 189 aa6.54□□□□□ -1.36
NEDD8-207ENST00000533242 TRGC2P03986 189 aa6.54□□□□□ -1.36
NEDD8-207ENST00000533242 HIST1H2BJP06899 126 aa6.54□□□□□ -1.36
NEDD8-207ENST00000533242 SAA2P0DJI9 122 aaPredicted RBP6.54□□□□□ -1.36
NEDD8-207ENST00000533242 GZMHP20718 246 aa6.54□□□□□ -1.36
NEDD8-207ENST00000533242 HIST1H2BOP23527 126 aa6.54□□□□□ -1.36
NEDD8-207ENST00000533242 HIST1H2BBP33778 126 aa6.54□□□□□ -1.36
NEDD8-207ENST00000533242 HIST1H2BDP58876 126 aa6.54□□□□□ -1.36
NEDD8-207ENST00000533242 HIST1H2BCP62807 126 aa6.54□□□□□ -1.36
NEDD8-207ENST00000533242 MEF2BQ02080 365 aaPredicted RBP6.54□□□□□ -1.36
NEDD8-207ENST00000533242 KIAA0141Q14154 515 aaPredicted RBP6.54□□□□□ -1.36
NEDD8-207ENST00000533242 HIST2H2BEQ16778 126 aa6.54□□□□□ -1.36
NEDD8-207ENST00000533242 NSUN5P1Q3KNT7 163 aa6.54□□□□□ -1.36
NEDD8-207ENST00000533242 AARDQ4LEZ3 155 aa6.54□□□□□ -1.36
NEDD8-207ENST00000533242 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.54□□□□□ -1.36
NEDD8-207ENST00000533242 GFI1BQ5VTD9 330 aa6.54□□□□□ -1.36
NEDD8-207ENST00000533242 PNKDQ8N490 385 aa6.54□□□□□ -1.36
NEDD8-207ENST00000533242 HIST1H2BHQ93079 126 aa6.54□□□□□ -1.36
NEDD8-207ENST00000533242 RPUSD4Q96CM3 377 aaKnown RBP6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms