RNA–Protein interactions for RNA: ENST00000532737.1

USP48-214, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 680 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-214ENST00000532737 G3V4G9 280 aa19.06■□□□□ 0.64
USP48-214ENST00000532737 K7EIM0 57 aa19.06■□□□□ 0.64
USP48-214ENST00000532737 OXLD1Q5BKU9 147 aa19.06■□□□□ 0.64
USP48-214ENST00000532737 CLEC19AQ6UXS0 136 aa19.06■□□□□ 0.64
USP48-214ENST00000532737 ZNF502Q8TBZ5 544 aa19.06■□□□□ 0.64
USP48-214ENST00000532737 VN1R17PQ8TDU5 208 aa19.06■□□□□ 0.64
USP48-214ENST00000532737 MISP3Q96FF7 219 aa19.06■□□□□ 0.64
USP48-214ENST00000532737 RCC1LQ96I51 464 aaKnown RBP19.06■□□□□ 0.64
USP48-214ENST00000532737 RBKSQ9H477 322 aa19.06■□□□□ 0.64
USP48-214ENST00000532737 HEYLQ9NQ87 328 aaPredicted RBP19.06■□□□□ 0.64
USP48-214ENST00000532737 BMPR1BO00238 502 aa19.05■□□□□ 0.64
USP48-214ENST00000532737 IL5P05113 134 aa19.05■□□□□ 0.64
USP48-214ENST00000532737 ZP3P21754 424 aa19.05■□□□□ 0.64
USP48-214ENST00000532737 BSXQ3C1V8 233 aa19.05■□□□□ 0.64
USP48-214ENST00000532737 PVRIGQ6DKI7 326 aa19.05■□□□□ 0.64
USP48-214ENST00000532737 TRBV7-1A0A0A6YYK4 115 aa19.04■□□□□ 0.64
USP48-214ENST00000532737 PPP5D1E7EU14 171 aa19.04■□□□□ 0.64
USP48-214ENST00000532737 I3L2K1 104 aa19.04■□□□□ 0.64
USP48-214ENST00000532737 IFNA21P01568 189 aa19.04■□□□□ 0.64
USP48-214ENST00000532737 SPNP16150 400 aa19.04■□□□□ 0.64
USP48-214ENST00000532737 FAM209BQ5JX69 171 aa19.04■□□□□ 0.64
USP48-214ENST00000532737 SAMD5Q5TGI4 173 aa19.04■□□□□ 0.64
USP48-214ENST00000532737 PLET1Q6UQ28 207 aa19.04■□□□□ 0.64
USP48-214ENST00000532737 C1QL4Q86Z23 238 aa19.04■□□□□ 0.64
USP48-214ENST00000532737 SCARB1Q8WTV0 552 aa19.04■□□□□ 0.64
USP48-214ENST00000532737 INMT-MINDY4F8WBC2 141 aa19.03■□□□□ 0.64
USP48-214ENST00000532737 OVOL1O14753 267 aa19.03■□□□□ 0.64
USP48-214ENST00000532737 SUB1P53999 127 aaKnown RBP eCLIP19.03■□□□□ 0.64
USP48-214ENST00000532737 C12orf45Q8N5I9 185 aaPredicted RBP19.03■□□□□ 0.64
USP48-214ENST00000532737 MARVELD1Q9BSK0 173 aa19.03■□□□□ 0.64
USP48-214ENST00000532737 MT-CO2P00403 227 aa19.02■□□□□ 0.64
USP48-214ENST00000532737 CLEC3BP05452 202 aa19.02■□□□□ 0.64
USP48-214ENST00000532737 HTR2BP41595 481 aa19.02■□□□□ 0.64
USP48-214ENST00000532737 KLF5Q13887 457 aaPredicted RBP19.02■□□□□ 0.64
USP48-214ENST00000532737 UXS1Q8NBZ7 420 aa19.02■□□□□ 0.64
USP48-214ENST00000532737 DTD1Q8TEA8 209 aa19.02■□□□□ 0.64
USP48-214ENST00000532737 PINX1Q96BK5 328 aaKnown RBP19.02■□□□□ 0.64
USP48-214ENST00000532737 MCRIP2Q9BUT9 160 aaKnown RBP19.02■□□□□ 0.64
USP48-214ENST00000532737 HIPK2Q9H2X6 1198 aa19.02■□□□□ 0.64
USP48-214ENST00000532737 FAM90A26D6RGX4 464 aa19.01■□□□□ 0.63
USP48-214ENST00000532737 RPEL1Q2QD12 228 aa19.01■□□□□ 0.63
USP48-214ENST00000532737 TMEM170AQ8WVE7 144 aa19.01■□□□□ 0.63
USP48-214ENST00000532737 OR10C1Q96KK4 312 aa19.01■□□□□ 0.63
USP48-214ENST00000532737 C21orf62Q9NYP8 219 aa19.01■□□□□ 0.63
USP48-214ENST00000532737 F8W735 103 aaPredicted RBP19■□□□□ 0.63
USP48-214ENST00000532737 GGCTO75223 188 aaKnown RBP19■□□□□ 0.63
USP48-214ENST00000532737 OR2C1O95371 312 aa19■□□□□ 0.63
USP48-214ENST00000532737 IGHV3-48P01763 117 aa19■□□□□ 0.63
USP48-214ENST00000532737 GPR183P32249 361 aa19■□□□□ 0.63
USP48-214ENST00000532737 ARL3P36405 182 aa19■□□□□ 0.63
USP48-214ENST00000532737 SYNJ2BPP57105 145 aa19■□□□□ 0.63
USP48-214ENST00000532737 SLC24A4Q8NFF2 622 aa19■□□□□ 0.63
USP48-214ENST00000532737 MAGT1Q9H0U3 335 aa19■□□□□ 0.63
USP48-214ENST00000532737 ZC4H2Q9NQZ6 224 aa19■□□□□ 0.63
USP48-214ENST00000532737 SEC14L6B5MCN3 397 aa18.99■□□□□ 0.63
USP48-214ENST00000532737 CCSO14618 274 aa18.99■□□□□ 0.63
USP48-214ENST00000532737 IAH1Q2TAA2 248 aaPredicted RBP18.99■□□□□ 0.63
USP48-214ENST00000532737 C2orf83Q53S99 150 aa18.99■□□□□ 0.63
USP48-214ENST00000532737 OR4D5Q8NGN0 318 aa18.99■□□□□ 0.63
USP48-214ENST00000532737 ID3Q02535 119 aa18.98■□□□□ 0.63
USP48-214ENST00000532737 MLANAQ16655 118 aa18.98■□□□□ 0.63
USP48-214ENST00000532737 ZBTB8BQ8NAP8 495 aaPredicted RBP18.98■□□□□ 0.63
USP48-214ENST00000532737 FNDC4Q9H6D8 234 aaPredicted RBP18.98■□□□□ 0.63
USP48-214ENST00000532737 GPN1Q9HCN4 374 aaPredicted RBP18.98■□□□□ 0.63
USP48-214ENST00000532737 PALMDQ9NP74 551 aa18.98■□□□□ 0.63
USP48-214ENST00000532737 OR2T8A6NH00 312 aa18.97■□□□□ 0.63
USP48-214ENST00000532737 CORTO00230 105 aa18.97■□□□□ 0.63
USP48-214ENST00000532737 PRAF2O60831 178 aa18.97■□□□□ 0.63
USP48-214ENST00000532737 MED6O75586 246 aa18.97■□□□□ 0.63
USP48-214ENST00000532737 IAPPP10997 89 aa18.97■□□□□ 0.63
USP48-214ENST00000532737 NPY1RP25929 384 aa18.97■□□□□ 0.63
USP48-214ENST00000532737 BEAN1Q3B7T3 259 aa18.97■□□□□ 0.63
USP48-214ENST00000532737 UBAC2Q8NBM4 344 aa18.97■□□□□ 0.63
USP48-214ENST00000532737 ATP6V0BQ99437 205 aa18.97■□□□□ 0.63
USP48-214ENST00000532737 U3KQ87 197 aa18.97■□□□□ 0.63
USP48-214ENST00000532737 SNRPGP15A8MWD9 76 aa18.96■□□□□ 0.63
USP48-214ENST00000532737 TGOLN2O43493 480 aa18.96■□□□□ 0.63
USP48-214ENST00000532737 SYNGR2O43760 224 aa18.96■□□□□ 0.63
USP48-214ENST00000532737 PTTG1O95997 202 aa18.96■□□□□ 0.63
USP48-214ENST00000532737 IFNA10P01566 189 aa18.96■□□□□ 0.63
USP48-214ENST00000532737 MFAP4P55083 255 aa18.96■□□□□ 0.63
USP48-214ENST00000532737 TATDN3Q17R31 274 aa18.96■□□□□ 0.63
USP48-214ENST00000532737 Q56UQ5 140 aa18.96■□□□□ 0.63
USP48-214ENST00000532737 KPRPQ5T749 579 aaPredicted RBP18.96■□□□□ 0.63
USP48-214ENST00000532737 ACSM6Q6P461 480 aa18.96■□□□□ 0.63
USP48-214ENST00000532737 GSKIPQ9P0R6 139 aa18.96■□□□□ 0.63
USP48-214ENST00000532737 FCGR2BP31994 310 aaPredicted RBP18.95■□□□□ 0.62
USP48-214ENST00000532737 NKX2-1P43699 371 aaPredicted RBP18.95■□□□□ 0.62
USP48-214ENST00000532737 POLR2GP62487 172 aaKnown RBP eCLIP18.95■□□□□ 0.62
USP48-214ENST00000532737 C9orf66Q5T8R8 295 aa18.95■□□□□ 0.62
USP48-214ENST00000532737 OR9G4Q8NGQ1 327 aa18.95■□□□□ 0.62
USP48-214ENST00000532737 BSCL2Q96G97 398 aaPredicted RBP18.95■□□□□ 0.62
USP48-214ENST00000532737 TXN2Q99757 166 aa18.95■□□□□ 0.62
USP48-214ENST00000532737 CHRDL1Q9BU40 450 aa18.95■□□□□ 0.62
USP48-214ENST00000532737 GPR61Q9BZJ8 451 aa18.95■□□□□ 0.62
USP48-214ENST00000532737 MRPL36Q9P0J6 103 aaKnown RBP18.95■□□□□ 0.62
USP48-214ENST00000532737 FAM25EA8MYX2 175 aa18.94■□□□□ 0.62
USP48-214ENST00000532737 WRBO00258 174 aa18.94■□□□□ 0.62
USP48-214ENST00000532737 ADMP35318 185 aa18.94■□□□□ 0.62
USP48-214ENST00000532737 OPRK1P41145 380 aa18.94■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms