RNA–Protein interactions for RNA: ENST00000532331.5

PTPRK-221, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 5,757 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-221ENST00000532331 MAPK1IP1LQ8NDC0 245 aa9.39□□□□□ -0.91
PTPRK-221ENST00000532331 LHFPL5Q8TAF8 219 aa9.39□□□□□ -0.91
PTPRK-221ENST00000532331 RNF114Q9Y508 228 aa9.39□□□□□ -0.91
PTPRK-221ENST00000532331 IGHV2-26A0A0B4J1V2 119 aa9.39□□□□□ -0.91
PTPRK-221ENST00000532331 STAG3L2P0CL84 134 aa9.39□□□□□ -0.91
PTPRK-221ENST00000532331 CEACAM8P31997 349 aaPredicted RBP9.39□□□□□ -0.91
PTPRK-221ENST00000532331 Q71RC1 249 aaPredicted RBP9.39□□□□□ -0.91
PTPRK-221ENST00000532331 RNASEH2CQ8TDP1 164 aaKnown RBP9.39□□□□□ -0.91
PTPRK-221ENST00000532331 TRBV6-7A0A0A0MS04 114 aa9.39□□□□□ -0.91
PTPRK-221ENST00000532331 NBEAP1P0C6P0 100 aa9.39□□□□□ -0.91
PTPRK-221ENST00000532331 KLRD1Q13241 179 aa9.39□□□□□ -0.91
PTPRK-221ENST00000532331 GTF3AQ92664 365 aaKnown RBP9.39□□□□□ -0.91
PTPRK-221ENST00000532331 TMEM250H0YL14 139 aa9.39□□□□□ -0.91
PTPRK-221ENST00000532331 FHITP49789 147 aa9.39□□□□□ -0.91
PTPRK-221ENST00000532331 NHLRC3Q5JS37 347 aa9.39□□□□□ -0.91
PTPRK-221ENST00000532331 CACNG8Q8WXS5 425 aa9.39□□□□□ -0.91
PTPRK-221ENST00000532331 NEU1Q99519 415 aa9.39□□□□□ -0.91
PTPRK-221ENST00000532331 SDHCQ99643 169 aaPredicted RBP9.39□□□□□ -0.91
PTPRK-221ENST00000532331 LEPROTL1O95214 131 aa9.38□□□□□ -0.91
PTPRK-221ENST00000532331 IGFBP2P18065 325 aa9.38□□□□□ -0.91
PTPRK-221ENST00000532331 ZNF56Q15929 161 aa9.38□□□□□ -0.91
PTPRK-221ENST00000532331 TMEM155Q4W5P6 130 aa9.38□□□□□ -0.91
PTPRK-221ENST00000532331 MORN2Q502X0 79 aa9.38□□□□□ -0.91
PTPRK-221ENST00000532331 TMEM219Q86XT9 240 aa9.38□□□□□ -0.91
PTPRK-221ENST00000532331 SFRP2Q96HF1 295 aa9.38□□□□□ -0.91
PTPRK-221ENST00000532331 RPRMQ9NS64 109 aa9.38□□□□□ -0.91
PTPRK-221ENST00000532331 FBLN5Q9UBX5 448 aa9.38□□□□□ -0.91
PTPRK-221ENST00000532331 MYO7BQ6PIF6 2116 aa9.38□□□□□ -0.91
PTPRK-221ENST00000532331 ESPL1Q14674 2120 aa9.38□□□□□ -0.91
PTPRK-221ENST00000532331 CENPWQ5EE01 88 aa9.38□□□□□ -0.91
PTPRK-221ENST00000532331 STHQ8IWL8 128 aa9.38□□□□□ -0.91
PTPRK-221ENST00000532331 RPUSD1Q9UJJ7 312 aaKnown RBP9.38□□□□□ -0.91
PTPRK-221ENST00000532331 OOSP1A8MZH6 123 aa9.38□□□□□ -0.91
PTPRK-221ENST00000532331 GPX4P36969 197 aaPredicted RBP9.38□□□□□ -0.91
PTPRK-221ENST00000532331 ZP1P60852 638 aa9.38□□□□□ -0.91
PTPRK-221ENST00000532331 FAM74A4Q5TZK3 123 aa9.38□□□□□ -0.91
PTPRK-221ENST00000532331 ZNF497Q6ZNH5 498 aa9.38□□□□□ -0.91
PTPRK-221ENST00000532331 TEX45Q8NA69 505 aa9.38□□□□□ -0.91
PTPRK-221ENST00000532331 RCC1LQ96I51 464 aaKnown RBP9.38□□□□□ -0.91
PTPRK-221ENST00000532331 TRBV9A0A0B4J1U6 114 aa9.38□□□□□ -0.91
PTPRK-221ENST00000532331 SAP30O75446 220 aa9.38□□□□□ -0.91
PTPRK-221ENST00000532331 HTN3P15516 51 aa9.38□□□□□ -0.91
PTPRK-221ENST00000532331 SAMD13Q5VXD3 122 aa9.38□□□□□ -0.91
PTPRK-221ENST00000532331 TMEM200BQ69YZ2 307 aa9.38□□□□□ -0.91
PTPRK-221ENST00000532331 TGIF2-C20orf24A0A0A6YYL0 155 aa9.37□□□□□ -0.91
PTPRK-221ENST00000532331 IGHV1-8P0DP01 117 aa9.37□□□□□ -0.91
PTPRK-221ENST00000532331 RPL24P83731 157 aaKnown RBP9.37□□□□□ -0.91
PTPRK-221ENST00000532331 ZNF362Q5T0B9 420 aaPredicted RBP9.37□□□□□ -0.91
PTPRK-221ENST00000532331 OR1P1Q8NH06 330 aa9.37□□□□□ -0.91
PTPRK-221ENST00000532331 TRAV41A0A0B4J266 112 aa9.37□□□□□ -0.91
PTPRK-221ENST00000532331 LILRA1O75019 489 aa9.37□□□□□ -0.91
PTPRK-221ENST00000532331 SAA1P0DJI8 122 aaPredicted RBP9.37□□□□□ -0.91
PTPRK-221ENST00000532331 LDLRAD2Q5SZI1 272 aa9.37□□□□□ -0.91
PTPRK-221ENST00000532331 GPR61Q9BZJ8 451 aa9.37□□□□□ -0.91
PTPRK-221ENST00000532331 TMEM238LA0A1B0GVL6 79 aa9.37□□□□□ -0.91
PTPRK-221ENST00000532331 A6NJY4 79 aa9.37□□□□□ -0.91
PTPRK-221ENST00000532331 RHOGP84095 191 aa9.37□□□□□ -0.91
PTPRK-221ENST00000532331 ZNF506Q5JVG8 444 aa9.37□□□□□ -0.91
PTPRK-221ENST00000532331 RAB37Q96AX2 223 aa9.37□□□□□ -0.91
PTPRK-221ENST00000532331 NLRC5Q86WI3 1866 aa9.37□□□□□ -0.91
PTPRK-221ENST00000532331 A0A0B4J293 547 aa9.37□□□□□ -0.91
PTPRK-221ENST00000532331 TCTAP57738 103 aa9.37□□□□□ -0.91
PTPRK-221ENST00000532331 PMCHL1Q16048 86 aa9.37□□□□□ -0.91
PTPRK-221ENST00000532331 KIR2DL4Q99706 377 aa9.37□□□□□ -0.91
PTPRK-221ENST00000532331 IGKV1-9A0A0C4DH69 117 aa9.37□□□□□ -0.91
PTPRK-221ENST00000532331 VENTXO95231 258 aa9.37□□□□□ -0.91
PTPRK-221ENST00000532331 SRIP30626 198 aa9.37□□□□□ -0.91
PTPRK-221ENST00000532331 TFF3Q07654 80 aa9.37□□□□□ -0.91
PTPRK-221ENST00000532331 DMRTA2Q96SC8 542 aa9.37□□□□□ -0.91
PTPRK-221ENST00000532331 LINC00527Q9UJ94 153 aa9.37□□□□□ -0.91
PTPRK-221ENST00000532331 CEACAM4O75871 244 aa9.36□□□□□ -0.91
PTPRK-221ENST00000532331 OR10S1Q8NGN2 331 aa9.36□□□□□ -0.91
PTPRK-221ENST00000532331 UPK2O00526 184 aa9.36□□□□□ -0.91
PTPRK-221ENST00000532331 TRAV24A0A0B4J272 114 aa9.36□□□□□ -0.91
PTPRK-221ENST00000532331 OR9G9P0C7N8 305 aa9.36□□□□□ -0.91
PTPRK-221ENST00000532331 EMP1P54849 157 aa9.36□□□□□ -0.91
PTPRK-221ENST00000532331 TPTE2P1Q5T6R2 138 aa9.36□□□□□ -0.91
PTPRK-221ENST00000532331 OR10AG1Q8NH19 301 aa9.36□□□□□ -0.91
PTPRK-221ENST00000532331 CGAP01215 116 aa9.36□□□□□ -0.91
PTPRK-221ENST00000532331 OR52E5Q8NH55 327 aa9.36□□□□□ -0.91
PTPRK-221ENST00000532331 DUX3Q96PT4 197 aa9.36□□□□□ -0.91
PTPRK-221ENST00000532331 BEX4Q9NWD9 120 aaPredicted RBP9.36□□□□□ -0.91
PTPRK-221ENST00000532331 MDC1Q14676 2089 aaKnown RBP9.36□□□□□ -0.91
PTPRK-221ENST00000532331 DIDO1Q9BTC0 2240 aaKnown RBP9.35□□□□□ -0.91
PTPRK-221ENST00000532331 H3BVH4 76 aa9.35□□□□□ -0.91
PTPRK-221ENST00000532331 HLA-DRB1P01911 266 aa9.35□□□□□ -0.91
PTPRK-221ENST00000532331 PRSS8Q16651 343 aa9.35□□□□□ -0.91
PTPRK-221ENST00000532331 IGHV3OR16-8A0A075B7F1 116 aa9.35□□□□□ -0.91
PTPRK-221ENST00000532331 SELLP14151 372 aa9.35□□□□□ -0.91
PTPRK-221ENST00000532331 HEPN1Q6WQI6 88 aa9.35□□□□□ -0.91
PTPRK-221ENST00000532331 ZNF319Q9P2F9 582 aa9.35□□□□□ -0.91
PTPRK-221ENST00000532331 TBL2Q9Y4P3 447 aaKnown RBP9.35□□□□□ -0.91
PTPRK-221ENST00000532331 ZFHX2Q9C0A1 2572 aaPredicted RBP9.35□□□□□ -0.91
PTPRK-221ENST00000532331 TSC2P49815 1807 aa9.35□□□□□ -0.91
PTPRK-221ENST00000532331 RPLP1P05386 114 aaKnown RBP9.35□□□□□ -0.91
PTPRK-221ENST00000532331 HBBP68871 147 aa9.35□□□□□ -0.91
PTPRK-221ENST00000532331 CR1LQ2VPA4 569 aa9.35□□□□□ -0.91
PTPRK-221ENST00000532331 PAPPA-AS1Q5QFB9 102 aa9.35□□□□□ -0.91
PTPRK-221ENST00000532331 TMEM70Q9BUB7 260 aa9.35□□□□□ -0.91
PTPRK-221ENST00000532331 WT1P19544 449 aaPredicted RBP9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms