RNA–Protein interactions for RNA: ENST00000532259.1

SRPRA-206, Transcript of SRP receptor subunit alpha, humanhuman

TSL 2 BASIC

Gene SRPRA, Length 2,453 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRA-206ENST00000532259 MISP3Q96FF7 219 aa12.19□□□□□ -0.46
SRPRA-206ENST00000532259 SMIM7Q9BQ49 75 aa12.19□□□□□ -0.46
SRPRA-206ENST00000532259 BPESC1Q9GZL8 116 aa12.19□□□□□ -0.46
SRPRA-206ENST00000532259 MRPL36Q9P0J6 103 aaKnown RBP12.19□□□□□ -0.46
SRPRA-206ENST00000532259 SEC14L6B5MCN3 397 aa12.19□□□□□ -0.46
SRPRA-206ENST00000532259 C11orf94C9JXX5 98 aa12.19□□□□□ -0.46
SRPRA-206ENST00000532259 HTR1DP28221 377 aa12.19□□□□□ -0.46
SRPRA-206ENST00000532259 LGALS7P47929 136 aa12.19□□□□□ -0.46
SRPRA-206ENST00000532259 CD69Q07108 199 aa12.19□□□□□ -0.46
SRPRA-206ENST00000532259 PRSS8Q16651 343 aa12.19□□□□□ -0.46
SRPRA-206ENST00000532259 FAM78BQ5VT40 261 aa12.19□□□□□ -0.46
SRPRA-206ENST00000532259 SLC16A13Q7RTY0 426 aa12.19□□□□□ -0.46
SRPRA-206ENST00000532259 AURKAIP1Q9NWT8 199 aaPredicted RBP12.19□□□□□ -0.46
SRPRA-206ENST00000532259 DOK5Q9P104 306 aa12.19□□□□□ -0.46
SRPRA-206ENST00000532259 SIGLEC9Q9Y336 463 aa12.19□□□□□ -0.46
SRPRA-206ENST00000532259 A0A1W2PN81 502 aa12.18□□□□□ -0.46
SRPRA-206ENST00000532259 CHRNA7P36544 502 aa12.18□□□□□ -0.46
SRPRA-206ENST00000532259 HES1Q14469 280 aa12.18□□□□□ -0.46
SRPRA-206ENST00000532259 SPNS3Q6ZMD2 512 aa12.18□□□□□ -0.46
SRPRA-206ENST00000532259 MIR17HGQ75NE6 70 aa12.18□□□□□ -0.46
SRPRA-206ENST00000532259 VMO1Q7Z5L0 202 aa12.18□□□□□ -0.46
SRPRA-206ENST00000532259 OR4A5Q8NH83 315 aa12.18□□□□□ -0.46
SRPRA-206ENST00000532259 LINC00869P0C866 280 aa12.18□□□□□ -0.46
SRPRA-206ENST00000532259 MMDQ15546 238 aa12.18□□□□□ -0.46
SRPRA-206ENST00000532259 ADIRFQ15847 76 aa12.18□□□□□ -0.46
SRPRA-206ENST00000532259 TMEM144Q7Z5S9 345 aa12.18□□□□□ -0.46
SRPRA-206ENST00000532259 NPIPB3Q92617 1050 aa12.18□□□□□ -0.46
SRPRA-206ENST00000532259 AMMECR1Q9Y4X0 333 aaPredicted RBP12.18□□□□□ -0.46
SRPRA-206ENST00000532259 RBP4P02753 201 aa12.17□□□□□ -0.46
SRPRA-206ENST00000532259 SNRPCP09234 159 aaKnown RBP12.17□□□□□ -0.46
SRPRA-206ENST00000532259 RPL27AP46776 148 aaKnown RBP12.17□□□□□ -0.46
SRPRA-206ENST00000532259 TPTE2P1Q5T6R2 138 aa12.17□□□□□ -0.46
SRPRA-206ENST00000532259 PPP1R27Q86WC6 154 aa12.17□□□□□ -0.46
SRPRA-206ENST00000532259 DYNAPQ8N1N2 210 aa12.17□□□□□ -0.46
SRPRA-206ENST00000532259 C15orf54Q8N8G6 183 aa12.17□□□□□ -0.46
SRPRA-206ENST00000532259 DERL1Q9BUN8 251 aa12.17□□□□□ -0.46
SRPRA-206ENST00000532259 PARLQ9H300 379 aa12.17□□□□□ -0.46
SRPRA-206ENST00000532259 IGLC7A0M8Q6 106 aa12.17□□□□□ -0.46
SRPRA-206ENST00000532259 NPPCP23582 126 aa12.17□□□□□ -0.46
SRPRA-206ENST00000532259 RPL29P47914 159 aaKnown RBP12.17□□□□□ -0.46
SRPRA-206ENST00000532259 EFNA4P52798 201 aa12.17□□□□□ -0.46
SRPRA-206ENST00000532259 PRR20EP86478 221 aa12.17□□□□□ -0.46
SRPRA-206ENST00000532259 PRR20CP86479 221 aa12.17□□□□□ -0.46
SRPRA-206ENST00000532259 PRR20DP86480 221 aa12.17□□□□□ -0.46
SRPRA-206ENST00000532259 PRR20BP86481 221 aa12.17□□□□□ -0.46
SRPRA-206ENST00000532259 PRR20AP86496 221 aa12.17□□□□□ -0.46
SRPRA-206ENST00000532259 ZNF90Q03938 601 aa12.17□□□□□ -0.46
SRPRA-206ENST00000532259 SMUG1Q53HV7 270 aa12.17□□□□□ -0.46
SRPRA-206ENST00000532259 SLC35E1Q96K37 410 aa12.17□□□□□ -0.46
SRPRA-206ENST00000532259 FAM103A1Q9BTL3 118 aaKnown RBP12.17□□□□□ -0.46
SRPRA-206ENST00000532259 MANBALQ9NQG1 85 aa12.17□□□□□ -0.46
SRPRA-206ENST00000532259 DPM3Q9P2X0 92 aa12.17□□□□□ -0.46
SRPRA-206ENST00000532259 SLC45A2Q9UMX9 530 aa12.17□□□□□ -0.46
SRPRA-206ENST00000532259 ABCA2Q9BZC7 2435 aa12.17□□□□□ -0.46
SRPRA-206ENST00000532259 FBN2P35556 2912 aa12.16□□□□□ -0.46
SRPRA-206ENST00000532259 MFAP2P55001 183 aa12.16□□□□□ -0.46
SRPRA-206ENST00000532259 MMD2Q8IY49 270 aa12.16□□□□□ -0.46
SRPRA-206ENST00000532259 SSX3Q99909 188 aa12.16□□□□□ -0.46
SRPRA-206ENST00000532259 SAV1Q9H4B6 383 aaPredicted RBP12.16□□□□□ -0.46
SRPRA-206ENST00000532259 VENTXO95231 258 aa12.16□□□□□ -0.46
SRPRA-206ENST00000532259 CRYGBP07316 175 aa12.16□□□□□ -0.46
SRPRA-206ENST00000532259 STAG3L2P0CL84 134 aa12.16□□□□□ -0.46
SRPRA-206ENST00000532259 STAG3L3P0CL85 134 aa12.16□□□□□ -0.46
SRPRA-206ENST00000532259 TEX45Q8NA69 505 aa12.16□□□□□ -0.46
SRPRA-206ENST00000532259 IGHV2-5P01817 119 aa12.15□□□□□ -0.46
SRPRA-206ENST00000532259 IGHV4-39P01824 125 aa12.15□□□□□ -0.46
SRPRA-206ENST00000532259 RND2P52198 227 aa12.15□□□□□ -0.46
SRPRA-206ENST00000532259 RHOBP62745 196 aa12.15□□□□□ -0.46
SRPRA-206ENST00000532259 GSX1Q9H4S2 264 aaPredicted RBP12.15□□□□□ -0.46
SRPRA-206ENST00000532259 SDF2L1Q9HCN8 221 aa12.15□□□□□ -0.46
SRPRA-206ENST00000532259 PGPEP1LA6NFU8 196 aa12.15□□□□□ -0.46
SRPRA-206ENST00000532259 CNIH1O95406 144 aa12.15□□□□□ -0.46
SRPRA-206ENST00000532259 MOSP00540 346 aa12.15□□□□□ -0.46
SRPRA-206ENST00000532259 OR10J4P0C629 311 aa12.15□□□□□ -0.46
SRPRA-206ENST00000532259 PRTN3P24158 256 aa12.15□□□□□ -0.46
SRPRA-206ENST00000532259 COMPP49747 757 aaPredicted RBP12.15□□□□□ -0.46
SRPRA-206ENST00000532259 MORN5Q5VZ52 161 aa12.15□□□□□ -0.46
SRPRA-206ENST00000532259 OR11H6Q8NGC7 330 aa12.15□□□□□ -0.46
SRPRA-206ENST00000532259 UHRF2Q96PU4 802 aa12.15□□□□□ -0.46
SRPRA-206ENST00000532259 SLC25A33Q9BSK2 321 aa12.15□□□□□ -0.46
SRPRA-206ENST00000532259 YTHDF2Q9Y5A9 579 aaKnown RBP12.15□□□□□ -0.46
SRPRA-206ENST00000532259 NDUFB4O95168 129 aa12.14□□□□□ -0.47
SRPRA-206ENST00000532259 CXorf1O96002 111 aa12.14□□□□□ -0.47
SRPRA-206ENST00000532259 SUB1P53999 127 aaKnown RBP eCLIP12.14□□□□□ -0.472e-19■■■■■ 32.5
SRPRA-206ENST00000532259 NECAP1Q8NC96 275 aa12.14□□□□□ -0.47
SRPRA-206ENST00000532259 KCNIP2Q9NS61 270 aa12.14□□□□□ -0.47
SRPRA-206ENST00000532259 TGIF2-C20orf24A0A0A6YYL0 155 aa12.14□□□□□ -0.47
SRPRA-206ENST00000532259 TRAV5A0A0B4J249 113 aa12.14□□□□□ -0.47
SRPRA-206ENST00000532259 OVOL3O00110 214 aa12.14□□□□□ -0.47
SRPRA-206ENST00000532259 HNF1AP20823 631 aa12.14□□□□□ -0.47
SRPRA-206ENST00000532259 GCHFRP30047 84 aa12.14□□□□□ -0.47
SRPRA-206ENST00000532259 RNF212Q495C1 297 aa12.14□□□□□ -0.47
SRPRA-206ENST00000532259 SRSF12Q8WXF0 261 aaKnown RBP12.14□□□□□ -0.47
SRPRA-206ENST00000532259 TMEM37Q8WXS4 190 aa12.14□□□□□ -0.47
SRPRA-206ENST00000532259 NRGNQ92686 78 aa12.14□□□□□ -0.47
SRPRA-206ENST00000532259 ODF3BA8MYP8 253 aa12.13□□□□□ -0.47
SRPRA-206ENST00000532259 M0R1W7 72 aa12.13□□□□□ -0.47
SRPRA-206ENST00000532259 OR7C2O60412 319 aa12.13□□□□□ -0.47
SRPRA-206ENST00000532259 MT-ND4LP03901 98 aa12.13□□□□□ -0.47
SRPRA-206ENST00000532259 CXCL1P09341 107 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms