RNA–Protein interactions for RNA: ENST00000531967.5

ECHDC1-222, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene ECHDC1, Length 2,585 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-222ENST00000531967 GNG4P50150 75 aa3.96□□□□□ -1.78
ECHDC1-222ENST00000531967 CCL15Q16663 113 aa3.96□□□□□ -1.78
ECHDC1-222ENST00000531967 UNQ9165/PRO28630Q6UXU0 137 aa3.96□□□□□ -1.78
ECHDC1-222ENST00000531967 PHYHIPLQ96FC7 376 aa3.96□□□□□ -1.78
ECHDC1-222ENST00000531967 CARD19Q96LW7 228 aa3.96□□□□□ -1.78
ECHDC1-222ENST00000531967 HSD17B10Q99714 261 aaKnown RBP3.96□□□□□ -1.78
ECHDC1-222ENST00000531967 POLR2J2Q9GZM3 115 aaKnown RBP3.96□□□□□ -1.78
ECHDC1-222ENST00000531967 COMMD5Q9GZQ3 224 aa3.96□□□□□ -1.78
ECHDC1-222ENST00000531967 POLR2J3Q9H1A7 115 aaKnown RBP3.96□□□□□ -1.78
ECHDC1-222ENST00000531967 BOKQ9UMX3 212 aaPredicted RBP3.96□□□□□ -1.78
ECHDC1-222ENST00000531967 A0A0G2JMZ2 1700 aa3.95□□□□□ -1.78
ECHDC1-222ENST00000531967 LRRC37A2A6NM11 1700 aa3.95□□□□□ -1.78
ECHDC1-222ENST00000531967 TRBV19A0A075B6N1 114 aa3.95□□□□□ -1.78
ECHDC1-222ENST00000531967 CCL15-CCL14A0A0B4J2E2 113 aa3.95□□□□□ -1.78
ECHDC1-222ENST00000531967 IGHV3-16A0A0C4DH30 117 aa3.95□□□□□ -1.78
ECHDC1-222ENST00000531967 DHRS12A0PJE2 317 aa3.95□□□□□ -1.78
ECHDC1-222ENST00000531967 SMIM1B2RUZ4 78 aa3.95□□□□□ -1.78
ECHDC1-222ENST00000531967 MAS1P04201 325 aa3.95□□□□□ -1.78
ECHDC1-222ENST00000531967 PGAM2P15259 253 aa3.95□□□□□ -1.78
ECHDC1-222ENST00000531967 HOXB6P17509 224 aaKnown RBP3.95□□□□□ -1.78
ECHDC1-222ENST00000531967 RPL22P35268 128 aaKnown RBP3.95□□□□□ -1.78
ECHDC1-222ENST00000531967 LPAR6P43657 344 aa3.95□□□□□ -1.78
ECHDC1-222ENST00000531967 CXCL12P48061 93 aa3.95□□□□□ -1.78
ECHDC1-222ENST00000531967 PPP1CAP62136 330 aa3.95□□□□□ -1.78
ECHDC1-222ENST00000531967 RPL23P62829 140 aaKnown RBP3.95□□□□□ -1.78
ECHDC1-222ENST00000531967 HSD52Q0P140 79 aa3.95□□□□□ -1.78
ECHDC1-222ENST00000531967 LRRC10Q5BKY1 277 aa3.95□□□□□ -1.78
ECHDC1-222ENST00000531967 GLYATL3Q5SZD4 288 aa3.95□□□□□ -1.78
ECHDC1-222ENST00000531967 GLT8D1Q68CQ7 371 aa3.95□□□□□ -1.78
ECHDC1-222ENST00000531967 LINC00596Q86U02 117 aa3.95□□□□□ -1.78
ECHDC1-222ENST00000531967 FNDC9Q8TBE3 224 aa3.95□□□□□ -1.78
ECHDC1-222ENST00000531967 SLC25A2Q9BXI2 301 aa3.95□□□□□ -1.78
ECHDC1-222ENST00000531967 LAMTOR3Q9UHA4 124 aa3.95□□□□□ -1.78
ECHDC1-222ENST00000531967 FLVCR1Q9Y5Y0 555 aa3.95□□□□□ -1.78
ECHDC1-222ENST00000531967 ZSWIM8A7E2V4 1837 aa3.95□□□□□ -1.78
ECHDC1-222ENST00000531967 TSC2P49815 1807 aa3.95□□□□□ -1.78
ECHDC1-222ENST00000531967 COX7A2P2O60397 106 aa3.95□□□□□ -1.78
ECHDC1-222ENST00000531967 IGLV2-14P01704 120 aa3.95□□□□□ -1.78
ECHDC1-222ENST00000531967 HLA-DQB2P05538 268 aa3.95□□□□□ -1.78
ECHDC1-222ENST00000531967 OR10J1P30954 320 aa3.95□□□□□ -1.78
ECHDC1-222ENST00000531967 FKBP1AP62942 108 aaKnown RBP3.95□□□□□ -1.78
ECHDC1-222ENST00000531967 SLC38A11Q08AI6 406 aa3.95□□□□□ -1.78
ECHDC1-222ENST00000531967 HMGN3Q15651 99 aa3.95□□□□□ -1.78
ECHDC1-222ENST00000531967 CST6Q15828 149 aa3.95□□□□□ -1.78
ECHDC1-222ENST00000531967 TCEAL5Q5H9L2 206 aa3.95□□□□□ -1.78
ECHDC1-222ENST00000531967 COA6Q5JTJ3 125 aaKnown RBP3.95□□□□□ -1.78
ECHDC1-222ENST00000531967 ZCCHC23Q6ZST2 131 aa3.95□□□□□ -1.78
ECHDC1-222ENST00000531967 GKN2Q86XP6 184 aa3.95□□□□□ -1.78
ECHDC1-222ENST00000531967 OR51T1Q8NGJ9 327 aa3.95□□□□□ -1.78
ECHDC1-222ENST00000531967 CIB3Q96Q77 187 aaPredicted RBP3.95□□□□□ -1.78
ECHDC1-222ENST00000531967 PRADC1Q9BSG0 188 aa3.95□□□□□ -1.78
ECHDC1-222ENST00000531967 ZNF586Q9NXT0 402 aa3.95□□□□□ -1.78
ECHDC1-222ENST00000531967 ZNF638Q14966 1978 aaKnown RBP3.94□□□□□ -1.78
ECHDC1-222ENST00000531967 COL2A1P02458 1487 aaPredicted RBP3.94□□□□□ -1.78
ECHDC1-222ENST00000531967 A0A1W2PRS3 328 aa3.94□□□□□ -1.78
ECHDC1-222ENST00000531967 APOC4-APOC2K7ER74 178 aa3.94□□□□□ -1.78
ECHDC1-222ENST00000531967 OVOL1O14753 267 aa3.94□□□□□ -1.78
ECHDC1-222ENST00000531967 APOC2P02655 101 aa3.94□□□□□ -1.78
ECHDC1-222ENST00000531967 CHTF8P0CG12 524 aa3.94□□□□□ -1.78
ECHDC1-222ENST00000531967 CCR2P41597 374 aa3.94□□□□□ -1.78
ECHDC1-222ENST00000531967 UBA52P62987 128 aaKnown RBP3.94□□□□□ -1.78
ECHDC1-222ENST00000531967 PSG7Q13046 419 aa3.94□□□□□ -1.78
ECHDC1-222ENST00000531967 DHRS2Q13268 280 aa3.94□□□□□ -1.78
ECHDC1-222ENST00000531967 ZNF440Q8IYI8 595 aa3.94□□□□□ -1.78
ECHDC1-222ENST00000531967 POP5Q969H6 163 aaKnown RBP3.94□□□□□ -1.78
ECHDC1-222ENST00000531967 DERL1Q9BUN8 251 aa3.94□□□□□ -1.78
ECHDC1-222ENST00000531967 BET1LQ9NYM9 111 aa3.94□□□□□ -1.78
ECHDC1-222ENST00000531967 SCN9AQ15858 1988 aa3.94□□□□□ -1.78
ECHDC1-222ENST00000531967 IGLV4-3A0A075B6K6 122 aa3.94□□□□□ -1.78
ECHDC1-222ENST00000531967 LY6G6EA0A0G2JKS1 128 aa3.94□□□□□ -1.78
ECHDC1-222ENST00000531967 C7orf66A4D0T2 115 aa3.94□□□□□ -1.78
ECHDC1-222ENST00000531967 H7BYZ3 331 aa3.94□□□□□ -1.78
ECHDC1-222ENST00000531967 M0R381 172 aa3.94□□□□□ -1.78
ECHDC1-222ENST00000531967 LGALS9O00182 355 aa3.94□□□□□ -1.78
ECHDC1-222ENST00000531967 TNFSF13O75888 250 aa3.94□□□□□ -1.78
ECHDC1-222ENST00000531967 APOMO95445 188 aa3.94□□□□□ -1.78
ECHDC1-222ENST00000531967 NTF3P20783 257 aa3.94□□□□□ -1.78
ECHDC1-222ENST00000531967 GABRA3P34903 492 aa3.94□□□□□ -1.78
ECHDC1-222ENST00000531967 C9orf66Q5T8R8 295 aa3.94□□□□□ -1.78
ECHDC1-222ENST00000531967 C1QTNF4Q9BXJ3 329 aa3.94□□□□□ -1.78
ECHDC1-222ENST00000531967 SLC25A22Q9H936 323 aa3.94□□□□□ -1.78
ECHDC1-222ENST00000531967 AMMECR1Q9Y4X0 333 aaPredicted RBP3.94□□□□□ -1.78
ECHDC1-222ENST00000531967 SCN5AQ14524 2016 aa3.93□□□□□ -1.78
ECHDC1-222ENST00000531967 MICAL3Q7RTP6 2002 aa3.93□□□□□ -1.78
ECHDC1-222ENST00000531967 TRAV5A0A0B4J249 113 aa3.93□□□□□ -1.78
ECHDC1-222ENST00000531967 J3QR89 54 aa3.93□□□□□ -1.78
ECHDC1-222ENST00000531967 GSTZ1O43708 216 aaPredicted RBP3.93□□□□□ -1.78
ECHDC1-222ENST00000531967 BCL2P10415 239 aa3.93□□□□□ -1.78
ECHDC1-222ENST00000531967 COX7A1P24310 79 aa3.93□□□□□ -1.78
ECHDC1-222ENST00000531967 IL3RAP26951 378 aa3.93□□□□□ -1.78
ECHDC1-222ENST00000531967 CRADDP78560 199 aa3.93□□□□□ -1.78
ECHDC1-222ENST00000531967 EGFEM1PQ0D2K5 195 aa3.93□□□□□ -1.78
ECHDC1-222ENST00000531967 PRR4Q16378 134 aa3.93□□□□□ -1.78
ECHDC1-222ENST00000531967 Q6Q795 121 aa3.93□□□□□ -1.78
ECHDC1-222ENST00000531967 ZNF584Q8IVC4 421 aa3.93□□□□□ -1.78
ECHDC1-222ENST00000531967 LMX1AQ8TE12 382 aa3.93□□□□□ -1.78
ECHDC1-222ENST00000531967 DUSP21Q9H596 190 aa3.93□□□□□ -1.78
ECHDC1-222ENST00000531967 COL11A2P13942 1736 aaPredicted RBP3.93□□□□□ -1.78
ECHDC1-222ENST00000531967 IGHV1-69-2A0A0G2JMI3 117 aa3.93□□□□□ -1.78
ECHDC1-222ENST00000531967 A0A0G2JMM0 328 aa3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms