RNA–Protein interactions for RNA: ENST00000531326.1

PTPN11-204, Transcript of protein tyrosine phosphatase, non-receptor type 11, human

TSL 4

Gene PTPN11, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN11-204	ENST00000531326	OR52E5	Q8NH55	327 aa		13.69	□□□□□ -0.22
PTPN11-204	ENST00000531326	ZNF431	Q8TF32	576 aa	Predicted RBP	13.69	□□□□□ -0.22
PTPN11-204	ENST00000531326	FANCD2OS	Q96PS1	177 aa		13.69	□□□□□ -0.22
PTPN11-204	ENST00000531326	DMRT1	Q9Y5R6	373 aa		13.69	□□□□□ -0.22
PTPN11-204	ENST00000531326	INMT-MINDY4	F8WBC2	141 aa		13.68	□□□□□ -0.22
PTPN11-204	ENST00000531326	PITX3	O75364	302 aa		13.68	□□□□□ -0.22
PTPN11-204	ENST00000531326	IFNA17	P01571	189 aa		13.68	□□□□□ -0.22
PTPN11-204	ENST00000531326	SLC25A6	P12236	298 aa		13.68	□□□□□ -0.22
PTPN11-204	ENST00000531326	OR2C3	Q8N628	320 aa		13.68	□□□□□ -0.22
PTPN11-204	ENST00000531326	PLEKHA3	Q9HB20	300 aa		13.68	□□□□□ -0.22
PTPN11-204	ENST00000531326	IGLV11-55	A0A075B6I3	123 aa		13.67	□□□□□ -0.22
PTPN11-204	ENST00000531326	MPTX1	A8MV57	137 aa		13.67	□□□□□ -0.22
PTPN11-204	ENST00000531326	INS-IGF2	F8WCM5	200 aa		13.67	□□□□□ -0.22
PTPN11-204	ENST00000531326	PTTG1	O95997	202 aa		13.67	□□□□□ -0.22
PTPN11-204	ENST00000531326	SPCS3	P61009	180 aa		13.67	□□□□□ -0.22
PTPN11-204	ENST00000531326	RHOG	P84095	191 aa		13.67	□□□□□ -0.22
PTPN11-204	ENST00000531326	PDCD10	Q9BUL8	212 aa		13.67	□□□□□ -0.22
PTPN11-204	ENST00000531326	GAR1	Q9NY12	217 aa	Known RBP	13.67	□□□□□ -0.22
PTPN11-204	ENST00000531326	F11R	Q9Y624	299 aa	Known RBP	13.67	□□□□□ -0.22
PTPN11-204	ENST00000531326	OR2J3	O76001	311 aa		13.66	□□□□□ -0.22
PTPN11-204	ENST00000531326	NXPH3	O95157	252 aa		13.66	□□□□□ -0.22
PTPN11-204	ENST00000531326	IGHV3-11	P01762	117 aa		13.66	□□□□□ -0.22
PTPN11-204	ENST00000531326	MFAP2	P55001	183 aa		13.66	□□□□□ -0.22
PTPN11-204	ENST00000531326	HSPB7	Q9UBY9	170 aa		13.66	□□□□□ -0.22
PTPN11-204	ENST00000531326	CSMD3	Q7Z407	3707 aa		13.65	□□□□□ -0.22
PTPN11-204	ENST00000531326	FAM223B	A6NKX1	122 aa		13.65	□□□□□ -0.22
PTPN11-204	ENST00000531326	DHFR	P00374	187 aa		13.65	□□□□□ -0.22
PTPN11-204	ENST00000531326	DEFA4	P12838	97 aa		13.65	□□□□□ -0.22
PTPN11-204	ENST00000531326	HOXA1	P49639	335 aa	Predicted RBP	13.65	□□□□□ -0.22
PTPN11-204	ENST00000531326	TNFRSF9	Q07011	255 aa		13.65	□□□□□ -0.22
PTPN11-204	ENST00000531326	FAM223A	Q8IWN6	122 aa		13.65	□□□□□ -0.22
PTPN11-204	ENST00000531326	C12orf45	Q8N5I9	185 aa	Predicted RBP	13.65	□□□□□ -0.22
PTPN11-204	ENST00000531326	ZNF114	Q8NC26	417 aa		13.65	□□□□□ -0.22
PTPN11-204	ENST00000531326	NECAP1	Q8NC96	275 aa		13.65	□□□□□ -0.22
PTPN11-204	ENST00000531326	OR1S1	Q8NH92	325 aa		13.65	□□□□□ -0.22
PTPN11-204	ENST00000531326	USMG5	Q96IX5	58 aa		13.65	□□□□□ -0.22
PTPN11-204	ENST00000531326	STARD9	Q9P2P6	4700 aa		13.65	□□□□□ -0.22
PTPN11-204	ENST00000531326	LYST	Q99698	3801 aa		13.65	□□□□□ -0.22
PTPN11-204	ENST00000531326		A0A0G2JLM5	398 aa		13.64	□□□□□ -0.23
PTPN11-204	ENST00000531326	PRAF2	O60831	178 aa		13.64	□□□□□ -0.23
PTPN11-204	ENST00000531326	NDUFB8	O95169	186 aa		13.64	□□□□□ -0.23
PTPN11-204	ENST00000531326	HSPB1	P04792	205 aa	Known RBP	13.64	□□□□□ -0.23
PTPN11-204	ENST00000531326	HIST1H1B	P16401	226 aa	Known RBP	13.64	□□□□□ -0.23
PTPN11-204	ENST00000531326	ERH	P84090	104 aa	Known RBP	13.64	□□□□□ -0.23
PTPN11-204	ENST00000531326	HAPLN4	Q86UW8	402 aa		13.64	□□□□□ -0.23
PTPN11-204	ENST00000531326	OR1P1	Q8NH06	330 aa		13.64	□□□□□ -0.23
PTPN11-204	ENST00000531326	CACFD1	Q9UGQ2	172 aa		13.64	□□□□□ -0.23
PTPN11-204	ENST00000531326	FBXL7	Q9UJT9	491 aa		13.64	□□□□□ -0.23
PTPN11-204	ENST00000531326	C13orf42	A0A1B0GVH6	325 aa		13.63	□□□□□ -0.23
PTPN11-204	ENST00000531326	SNRPGP15	A8MWD9	76 aa		13.63	□□□□□ -0.23
PTPN11-204	ENST00000531326	IFNA21	P01568	189 aa		13.63	□□□□□ -0.23
PTPN11-204	ENST00000531326	LYL1	P12980	280 aa		13.63	□□□□□ -0.23
PTPN11-204	ENST00000531326	ATP5G2	Q06055	141 aa		13.63	□□□□□ -0.23
PTPN11-204	ENST00000531326	C15orf32	Q32M92	178 aa		13.63	□□□□□ -0.23
PTPN11-204	ENST00000531326	ZNF343	Q6P1L6	599 aa		13.63	□□□□□ -0.23
PTPN11-204	ENST00000531326		Q8N1Y9	231 aa		13.63	□□□□□ -0.23
PTPN11-204	ENST00000531326	UXS1	Q8NBZ7	420 aa		13.63	□□□□□ -0.23
PTPN11-204	ENST00000531326	OR10C1	Q96KK4	312 aa		13.63	□□□□□ -0.23
PTPN11-204	ENST00000531326	TM2D3	Q9BRN9	247 aa		13.63	□□□□□ -0.23
PTPN11-204	ENST00000531326	RBKS	Q9H477	322 aa		13.63	□□□□□ -0.23
PTPN11-204	ENST00000531326	ZMAT4	Q9H898	229 aa		13.63	□□□□□ -0.23
PTPN11-204	ENST00000531326	GPN1	Q9HCN4	374 aa	Predicted RBP	13.63	□□□□□ -0.23
PTPN11-204	ENST00000531326	ENY2	Q9NPA8	101 aa		13.63	□□□□□ -0.23
PTPN11-204	ENST00000531326	EPPK1	P58107	5090 aa	Known RBP	13.62	□□□□□ -0.23
PTPN11-204	ENST00000531326	CEBPZOS	A8MTT3	80 aa		13.62	□□□□□ -0.23
PTPN11-204	ENST00000531326	CCS	O14618	274 aa		13.62	□□□□□ -0.23
PTPN11-204	ENST00000531326	RNASE2	P10153	161 aa	Known RBP	13.62	□□□□□ -0.23
PTPN11-204	ENST00000531326	BSX	Q3C1V8	233 aa		13.62	□□□□□ -0.23
PTPN11-204	ENST00000531326	PVRIG	Q6DKI7	326 aa		13.62	□□□□□ -0.23
PTPN11-204	ENST00000531326	SLC25A24	Q6NUK1	477 aa		13.62	□□□□□ -0.23
PTPN11-204	ENST00000531326	OR4D5	Q8NGN0	318 aa		13.62	□□□□□ -0.23
PTPN11-204	ENST00000531326	OR4C12	Q96R67	309 aa		13.62	□□□□□ -0.23
PTPN11-204	ENST00000531326	CITED4	Q96RK1	184 aa		13.62	□□□□□ -0.23
PTPN11-204	ENST00000531326	FAM90A26	D6RGX4	464 aa		13.61	□□□□□ -0.23
PTPN11-204	ENST00000531326	IGHV4-30-4	P0DP06	118 aa		13.61	□□□□□ -0.23
PTPN11-204	ENST00000531326	EXOSC2	Q13868	293 aa	Known RBP	13.61	□□□□□ -0.23
PTPN11-204	ENST00000531326	RGS21	Q2M5E4	152 aa		13.61	□□□□□ -0.23
PTPN11-204	ENST00000531326	OR1L6	Q8NGR2	347 aa		13.61	□□□□□ -0.23
PTPN11-204	ENST00000531326	MFSD2B	A6NFX1	497 aa		13.6	□□□□□ -0.23
PTPN11-204	ENST00000531326		K7EIM0	57 aa		13.6	□□□□□ -0.23
PTPN11-204	ENST00000531326	CYB5B	O43169	146 aa		13.6	□□□□□ -0.23
PTPN11-204	ENST00000531326	IGLV1-51	P01701	117 aa		13.6	□□□□□ -0.23
PTPN11-204	ENST00000531326	TRBV12-3	P01733	135 aa		13.6	□□□□□ -0.23
PTPN11-204	ENST00000531326	SNCA	P37840	140 aa		13.6	□□□□□ -0.23
PTPN11-204	ENST00000531326	ID3	Q02535	119 aa		13.6	□□□□□ -0.23
PTPN11-204	ENST00000531326	IAH1	Q2TAA2	248 aa	Predicted RBP	13.6	□□□□□ -0.23
PTPN11-204	ENST00000531326	ZBTB8B	Q8NAP8	495 aa	Predicted RBP	13.6	□□□□□ -0.23
PTPN11-204	ENST00000531326	DTD1	Q8TEA8	209 aa		13.6	□□□□□ -0.23
PTPN11-204	ENST00000531326	HEYL	Q9NQ87	328 aa	Predicted RBP	13.6	□□□□□ -0.23
PTPN11-204	ENST00000531326	C19orf73	Q9NVV2	129 aa		13.6	□□□□□ -0.23
PTPN11-204	ENST00000531326	THYN1	Q9P016	225 aa		13.6	□□□□□ -0.23
PTPN11-204	ENST00000531326		S4R3C0	116 aa		13.6	□□□□□ -0.23
PTPN11-204	ENST00000531326	DNAH1	Q9P2D7	4330 aa		13.6	□□□□□ -0.23
PTPN11-204	ENST00000531326	RBM14-RBM4	A0A0A0MSL8	147 aa	Known RBP	13.59	□□□□□ -0.23
PTPN11-204	ENST00000531326	LCE6A	A0A183	80 aa		13.59	□□□□□ -0.23
PTPN11-204	ENST00000531326	C7orf66	A4D0T2	115 aa		13.59	□□□□□ -0.23
PTPN11-204	ENST00000531326	ANKRD34B	A5PLL1	514 aa		13.59	□□□□□ -0.23
PTPN11-204	ENST00000531326	IGHV3-23	P01764	117 aa		13.59	□□□□□ -0.23
PTPN11-204	ENST00000531326	OXA1L	Q15070	435 aa		13.59	□□□□□ -0.23
PTPN11-204	ENST00000531326	TATDN3	Q17R31	274 aa		13.59	□□□□□ -0.23

Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms