RNA–Protein interactions for RNA: ENST00000530546.5

USP35-207, Transcript of ubiquitin specific peptidase 35, humanhuman

TSL 1 (best)

Gene USP35, Length 2,986 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP35-207ENST00000530546 QTRT1Q9BXR0 403 aaKnown RBP9.49□□□□□ -0.89
USP35-207ENST00000530546 IGHV2-26A0A0B4J1V2 119 aa9.49□□□□□ -0.89
USP35-207ENST00000530546 FAM90A26D6RGX4 464 aa9.49□□□□□ -0.89
USP35-207ENST00000530546 OR9G9P0C7N8 305 aa9.49□□□□□ -0.89
USP35-207ENST00000530546 RHOGP84095 191 aa9.49□□□□□ -0.89
USP35-207ENST00000530546 OCIAD2Q56VL3 154 aa9.49□□□□□ -0.89
USP35-207ENST00000530546 PRAMEF5Q5TYX0 476 aa9.49□□□□□ -0.89
USP35-207ENST00000530546 STUMQ69YW2 141 aa9.49□□□□□ -0.89
USP35-207ENST00000530546 ACSM6Q6P461 480 aa9.49□□□□□ -0.89
USP35-207ENST00000530546 C1orf229Q6ZS94 237 aaPredicted RBP9.49□□□□□ -0.89
USP35-207ENST00000530546 IFI27L2Q9H2X8 130 aa9.49□□□□□ -0.89
USP35-207ENST00000530546 TRGV10A0A0A0MS01 117 aa9.48□□□□□ -0.89
USP35-207ENST00000530546 NPPCP23582 126 aa9.48□□□□□ -0.89
USP35-207ENST00000530546 NUP37Q8NFH4 326 aa9.48□□□□□ -0.89
USP35-207ENST00000530546 GATAD1Q8WUU5 269 aa9.48□□□□□ -0.89
USP35-207ENST00000530546 NEUROG1Q92886 237 aa9.48□□□□□ -0.89
USP35-207ENST00000530546 TMEM14EPQ6UXP3 125 aa9.48□□□□□ -0.89
USP35-207ENST00000530546 CST9LQ9H4G1 147 aa9.48□□□□□ -0.89
USP35-207ENST00000530546 NRN1Q9NPD7 142 aa9.48□□□□□ -0.89
USP35-207ENST00000530546 KCNIP2Q9NS61 270 aa9.48□□□□□ -0.89
USP35-207ENST00000530546 MRPL27Q9P0M9 148 aaKnown RBP9.48□□□□□ -0.89
USP35-207ENST00000530546 ZNRD1Q9P1U0 126 aa9.48□□□□□ -0.89
USP35-207ENST00000530546 SSUH2Q9Y2M2 353 aa9.48□□□□□ -0.89
USP35-207ENST00000530546 TBL2Q9Y4P3 447 aaKnown RBP9.48□□□□□ -0.89
USP35-207ENST00000530546 NBASA2RRP1 2371 aa9.48□□□□□ -0.89
USP35-207ENST00000530546 TMEM238C9JI98 176 aa9.48□□□□□ -0.89
USP35-207ENST00000530546 F2RL2O00254 374 aa9.48□□□□□ -0.89
USP35-207ENST00000530546 C1QTNF9P0C862 333 aa9.48□□□□□ -0.89
USP35-207ENST00000530546 CBLN1P23435 193 aa9.48□□□□□ -0.89
USP35-207ENST00000530546 HINT1P49773 126 aaPredicted RBP9.48□□□□□ -0.89
USP35-207ENST00000530546 TLE1Q04724 770 aa9.48□□□□□ -0.89
USP35-207ENST00000530546 CT45A1Q5HYN5 189 aa9.48□□□□□ -0.89
USP35-207ENST00000530546 OR10J3Q5JRS4 329 aa9.48□□□□□ -0.89
USP35-207ENST00000530546 CT45A3Q8NHU0 189 aa9.48□□□□□ -0.89
USP35-207ENST00000530546 FAM222BQ8WU58 562 aa9.48□□□□□ -0.89
USP35-207ENST00000530546 RND1Q92730 232 aa9.48□□□□□ -0.89
USP35-207ENST00000530546 S1PR3Q99500 378 aa9.48□□□□□ -0.89
USP35-207ENST00000530546 TRAV3A0A0B4J244 114 aa9.47□□□□□ -0.89
USP35-207ENST00000530546 KBTBD11-OT1A0A1B0GTJ5 212 aa9.47□□□□□ -0.89
USP35-207ENST00000530546 C17orf100A8MU93 164 aa9.47□□□□□ -0.89
USP35-207ENST00000530546 M0QZ24 198 aa9.47□□□□□ -0.89
USP35-207ENST00000530546 TMEM249Q2WGJ8 235 aa9.47□□□□□ -0.89
USP35-207ENST00000530546 Q8TCH9 128 aa9.47□□□□□ -0.89
USP35-207ENST00000530546 CCL17Q92583 94 aa9.47□□□□□ -0.89
USP35-207ENST00000530546 SMIM12Q96EX1 92 aa9.47□□□□□ -0.89
USP35-207ENST00000530546 KCNS1Q96KK3 526 aa9.47□□□□□ -0.89
USP35-207ENST00000530546 TXNDC17Q9BRA2 123 aa9.47□□□□□ -0.89
USP35-207ENST00000530546 ZNF835Q9Y2P0 537 aa9.47□□□□□ -0.89
USP35-207ENST00000530546 RAXQ9Y2V3 346 aa9.47□□□□□ -0.89
USP35-207ENST00000530546 HMGB3O15347 200 aaKnown RBP9.47□□□□□ -0.89
USP35-207ENST00000530546 GNB1P62873 340 aa9.47□□□□□ -0.89
USP35-207ENST00000530546 ZNF90Q03938 601 aa9.47□□□□□ -0.89
USP35-207ENST00000530546 RBPJQ06330 500 aa9.47□□□□□ -0.89
USP35-207ENST00000530546 PMCHL1Q16048 86 aa9.47□□□□□ -0.89
USP35-207ENST00000530546 CR1LQ2VPA4 569 aa9.47□□□□□ -0.89
USP35-207ENST00000530546 OR4A16Q8NH70 328 aa9.47□□□□□ -0.89
USP35-207ENST00000530546 NUDT11Q96G61 164 aa9.47□□□□□ -0.89
USP35-207ENST00000530546 RNF114Q9Y508 228 aa9.47□□□□□ -0.89
USP35-207ENST00000530546 DYSFO75923 2080 aa9.46□□□□□ -0.89
USP35-207ENST00000530546 IGLC7A0M8Q6 106 aa9.46□□□□□ -0.89
USP35-207ENST00000530546 GFRA3O60609 400 aa9.46□□□□□ -0.89
USP35-207ENST00000530546 CGB3P0DN86 165 aa9.46□□□□□ -0.89
USP35-207ENST00000530546 CGB7P0DN87 165 aa9.46□□□□□ -0.89
USP35-207ENST00000530546 TNFRSF1AP19438 455 aa9.46□□□□□ -0.89
USP35-207ENST00000530546 PRRX1P54821 245 aa9.46□□□□□ -0.89
USP35-207ENST00000530546 ERVK-16P61578 105 aa9.46□□□□□ -0.89
USP35-207ENST00000530546 ZNF788Q6ZQV5 615 aa9.46□□□□□ -0.89
USP35-207ENST00000530546 C19orf35Q6ZS72 473 aa9.46□□□□□ -0.89
USP35-207ENST00000530546 OR10P1Q8NGE3 313 aa9.46□□□□□ -0.89
USP35-207ENST00000530546 OR10G8Q8NGN5 311 aa9.46□□□□□ -0.89
USP35-207ENST00000530546 FAM103A1Q9BTL3 118 aaKnown RBP9.46□□□□□ -0.89
USP35-207ENST00000530546 SAP30LQ9HAJ7 183 aa9.46□□□□□ -0.89
USP35-207ENST00000530546 IL36BQ9NZH7 164 aa9.46□□□□□ -0.89
USP35-207ENST00000530546 C17orf112F2Z3M2 114 aa9.46□□□□□ -0.9
USP35-207ENST00000530546 FCN1O00602 326 aa9.46□□□□□ -0.9
USP35-207ENST00000530546 SAA2P0DJI9 122 aaPredicted RBP9.46□□□□□ -0.9
USP35-207ENST00000530546 VAMP3Q15836 100 aa9.46□□□□□ -0.9
USP35-207ENST00000530546 LDLRAD2Q5SZI1 272 aa9.46□□□□□ -0.9
USP35-207ENST00000530546 GNB1LQ9BYB4 327 aa9.46□□□□□ -0.9
USP35-207ENST00000530546 KALRNO60229 2985 aa9.46□□□□□ -0.9
USP35-207ENST00000530546 K7ERU9 68 aa9.45□□□□□ -0.9
USP35-207ENST00000530546 RBFOX2O43251 390 aaKnown RBP eCLIP9.45□□□□□ -0.94e-6■■■■□ 21.5
USP35-207ENST00000530546 MT-ND6P03923 174 aa9.45□□□□□ -0.9
USP35-207ENST00000530546 AMTP48728 403 aa9.45□□□□□ -0.9
USP35-207ENST00000530546 TFF3Q07654 80 aa9.45□□□□□ -0.9
USP35-207ENST00000530546 HLA-DRB5Q30154 266 aa9.45□□□□□ -0.9
USP35-207ENST00000530546 TMEM147Q9BVK8 224 aa9.45□□□□□ -0.9
USP35-207ENST00000530546 DYNLRB1Q9NP97 96 aa9.45□□□□□ -0.9
USP35-207ENST00000530546 JKAMPQ9P055 326 aa9.45□□□□□ -0.9
USP35-207ENST00000530546 TRAV34A0A0B4J273 112 aa9.45□□□□□ -0.9
USP35-207ENST00000530546 FAM90A27PA6NNH2 459 aa9.45□□□□□ -0.9
USP35-207ENST00000530546 NDUFS8O00217 210 aa9.45□□□□□ -0.9
USP35-207ENST00000530546 NDUFB4O95168 129 aa9.45□□□□□ -0.9
USP35-207ENST00000530546 LRRC10Q5BKY1 277 aa9.45□□□□□ -0.9
USP35-207ENST00000530546 Q6ZVH6 145 aa9.45□□□□□ -0.9
USP35-207ENST00000530546 GNB4Q9HAV0 340 aa9.45□□□□□ -0.9
USP35-207ENST00000530546 IDI2-AS1Q9NZ38 188 aa9.45□□□□□ -0.9
USP35-207ENST00000530546 RPH3ALQ9UNE2 315 aa9.45□□□□□ -0.9
USP35-207ENST00000530546 MSRB2Q9Y3D2 182 aa9.45□□□□□ -0.9
USP35-207ENST00000530546 RAI1Q7Z5J4 1906 aaPredicted RBP9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 91.9 ms