RNA–Protein interactions for RNA: ENST00000530041.5

USP47-209, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 3

Gene USP47, Length 767 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-209ENST00000530041 IGLV3-32A0A0A0MS00 114 aa3.12□□□□□ -1.91
USP47-209ENST00000530041 TGIF2-C20orf24A0A0A6YYL0 155 aa3.12□□□□□ -1.91
USP47-209ENST00000530041 ZNF816-ZNF321PA0A0X1KG74 233 aa3.12□□□□□ -1.91
USP47-209ENST00000530041 DUXBA0A1W2PPF3 345 aa3.12□□□□□ -1.91
USP47-209ENST00000530041 IGSF23A1L1A6 192 aa3.12□□□□□ -1.91
USP47-209ENST00000530041 ZNF727A8MUV8 499 aa3.12□□□□□ -1.91
USP47-209ENST00000530041 C9J4A7 227 aa3.12□□□□□ -1.91
USP47-209ENST00000530041 TRAF3IP2O43734 574 aaPredicted RBP3.12□□□□□ -1.91
USP47-209ENST00000530041 PRH1P02810 166 aa3.12□□□□□ -1.91
USP47-209ENST00000530041 OR5AC1P0C628 307 aa3.12□□□□□ -1.91
USP47-209ENST00000530041 TRGC1P0CF51 173 aa3.12□□□□□ -1.91
USP47-209ENST00000530041 PGA4P0DJD7 388 aa3.12□□□□□ -1.91
USP47-209ENST00000530041 PGA3P0DJD8 388 aa3.12□□□□□ -1.91
USP47-209ENST00000530041 ZNF728P0DKX0 622 aa3.12□□□□□ -1.91
USP47-209ENST00000530041 OR5H8P0DN80 308 aa3.12□□□□□ -1.91
USP47-209ENST00000530041 ATP6V0CP27449 155 aa3.12□□□□□ -1.91
USP47-209ENST00000530041 IL2RGP31785 369 aa3.12□□□□□ -1.91
USP47-209ENST00000530041 ARR3P36575 388 aa3.12□□□□□ -1.91
USP47-209ENST00000530041 KIR2DS2P43631 304 aa3.12□□□□□ -1.91
USP47-209ENST00000530041 PIGPP57054 158 aa3.12□□□□□ -1.91
USP47-209ENST00000530041 SLC35B1P78383 322 aa3.12□□□□□ -1.91
USP47-209ENST00000530041 HLA-DRB3P79483 266 aa3.12□□□□□ -1.91
USP47-209ENST00000530041 ZNF266Q14584 549 aa3.12□□□□□ -1.91
USP47-209ENST00000530041 RSU1Q15404 277 aa3.12□□□□□ -1.91
USP47-209ENST00000530041 OR8B8Q15620 311 aa3.12□□□□□ -1.91
USP47-209ENST00000530041 KISS1Q15726 138 aa3.12□□□□□ -1.91
USP47-209ENST00000530041 OR2T2Q6IF00 324 aa3.12□□□□□ -1.91
USP47-209ENST00000530041 FBXW12Q6X9E4 464 aa3.12□□□□□ -1.91
USP47-209ENST00000530041 Q6ZS49 121 aa3.12□□□□□ -1.91
USP47-209ENST00000530041 LYZL2Q7Z4W2 148 aa3.12□□□□□ -1.91
USP47-209ENST00000530041 C17orf82Q86X59 251 aaPredicted RBP3.12□□□□□ -1.91
USP47-209ENST00000530041 VKORC1L1Q8N0U8 176 aa3.12□□□□□ -1.91
USP47-209ENST00000530041 PLPP5Q8NEB5 264 aa3.12□□□□□ -1.91
USP47-209ENST00000530041 OR2G3Q8NGZ4 309 aa3.12□□□□□ -1.91
USP47-209ENST00000530041 OR6X1Q8NH79 312 aa3.12□□□□□ -1.91
USP47-209ENST00000530041 CLDND2Q8NHS1 167 aa3.12□□□□□ -1.91
USP47-209ENST00000530041 RTN4IP1Q8WWV3 396 aaPredicted RBP3.12□□□□□ -1.91
USP47-209ENST00000530041 MBD3L1Q8WWY6 194 aa3.12□□□□□ -1.91
USP47-209ENST00000530041 PP6455Q8WZ26 134 aa3.12□□□□□ -1.91
USP47-209ENST00000530041 MAFIPQ8WZ33 124 aa3.12□□□□□ -1.91
USP47-209ENST00000530041 FRZBQ92765 325 aa3.12□□□□□ -1.91
USP47-209ENST00000530041 DDIT4LQ96D03 193 aa3.12□□□□□ -1.91
USP47-209ENST00000530041 RBMXL1Q96E39 390 aaKnown RBP3.12□□□□□ -1.91
USP47-209ENST00000530041 GNPNAT1Q96EK6 184 aaPredicted RBP3.12□□□□□ -1.91
USP47-209ENST00000530041 HIST1H2BLQ99880 126 aa3.12□□□□□ -1.91
USP47-209ENST00000530041 HES7Q9BYE0 225 aa3.12□□□□□ -1.91
USP47-209ENST00000530041 SLC25A31Q9H0C2 315 aa3.12□□□□□ -1.91
USP47-209ENST00000530041 PARP12Q9H0J9 701 aaKnown RBP3.12□□□□□ -1.91
USP47-209ENST00000530041 PLEKHF2Q9H8W4 249 aa3.12□□□□□ -1.91
USP47-209ENST00000530041 MED29Q9NX70 200 aa3.12□□□□□ -1.91
USP47-209ENST00000530041 DKKL1Q9UK85 242 aa3.12□□□□□ -1.91
USP47-209ENST00000530041 WSB1Q9Y6I7 421 aa3.12□□□□□ -1.91
USP47-209ENST00000530041 C2orf16Q68DN1 1984 aa3.11□□□□□ -1.91
USP47-209ENST00000530041 PHF3Q92576 2039 aaKnown RBP3.11□□□□□ -1.91
USP47-209ENST00000530041 IGHV3-35A0A0C4DH35 117 aa3.11□□□□□ -1.91
USP47-209ENST00000530041 A0A0G2JRQ6 117 aa3.11□□□□□ -1.91
USP47-209ENST00000530041 SPTY2D1-AS1A0A0U1RR47 76 aa3.11□□□□□ -1.91
USP47-209ENST00000530041 C5orf63A6NC05 138 aa3.11□□□□□ -1.91
USP47-209ENST00000530041 NKX2-6A6NCS4 301 aa3.11□□□□□ -1.91
USP47-209ENST00000530041 RBMY1BA6NDE4 496 aaKnown RBP3.11□□□□□ -1.91
USP47-209ENST00000530041 RBMY1EA6NEQ0 496 aaKnown RBP3.11□□□□□ -1.91
USP47-209ENST00000530041 FAM24AA6NFZ4 105 aa3.11□□□□□ -1.91
USP47-209ENST00000530041 A8MWP6 167 aa3.11□□□□□ -1.91
USP47-209ENST00000530041 F6UB75 175 aa3.11□□□□□ -1.91
USP47-209ENST00000530041 TSTD3H0UI37 97 aa3.11□□□□□ -1.91
USP47-209ENST00000530041 SMKR1H3BMG3 65 aa3.11□□□□□ -1.91
USP47-209ENST00000530041 CLDN34H7C241 214 aa3.11□□□□□ -1.91
USP47-209ENST00000530041 K7EN84 100 aa3.11□□□□□ -1.91
USP47-209ENST00000530041 GEMIN2O14893 280 aaKnown RBP3.11□□□□□ -1.91
USP47-209ENST00000530041 DHRS3O75911 302 aa3.11□□□□□ -1.91
USP47-209ENST00000530041 KLF8O95600 359 aaPredicted RBP3.11□□□□□ -1.91
USP47-209ENST00000530041 CYB5R3P00387 301 aaPredicted RBP3.11□□□□□ -1.91
USP47-209ENST00000530041 OXTP01178 125 aa3.11□□□□□ -1.91
USP47-209ENST00000530041 GCGP01275 180 aa3.11□□□□□ -1.91
USP47-209ENST00000530041 IGLV3-19P01714 112 aa3.11□□□□□ -1.91
USP47-209ENST00000530041 TRGC2P03986 189 aa3.11□□□□□ -1.91
USP47-209ENST00000530041 IGHV4-34P06331 123 aa3.11□□□□□ -1.91
USP47-209ENST00000530041 PFN1P07737 140 aaKnown RBP3.11□□□□□ -1.91
USP47-209ENST00000530041 RBMY1DP0C7P1 496 aaKnown RBP3.11□□□□□ -1.91
USP47-209ENST00000530041 RBMY1A1P0DJD3 496 aaKnown RBP3.11□□□□□ -1.91
USP47-209ENST00000530041 GIMD1P0DJR0 217 aa3.11□□□□□ -1.91
USP47-209ENST00000530041 CTSEP14091 401 aa3.11□□□□□ -1.91
USP47-209ENST00000530041 FGF7P21781 194 aa3.11□□□□□ -1.91
USP47-209ENST00000530041 IGHV1-2P23083 117 aa3.11□□□□□ -1.91
USP47-209ENST00000530041 GABRR1P24046 479 aa3.11□□□□□ -1.91
USP47-209ENST00000530041 CAPZBP47756 277 aa3.11□□□□□ -1.91
USP47-209ENST00000530041 SUB1P53999 127 aaKnown RBP eCLIP3.11□□□□□ -1.91
USP47-209ENST00000530041 TAS2R30P59541 319 aa3.11□□□□□ -1.91
USP47-209ENST00000530041 NUTF2P61970 127 aaKnown RBP3.11□□□□□ -1.91
USP47-209ENST00000530041 H3F3AP84243 136 aa3.11□□□□□ -1.91
USP47-209ENST00000530041 BAXQ07812 192 aa3.11□□□□□ -1.91
USP47-209ENST00000530041 ENDOGQ14249 297 aaKnown RBP3.11□□□□□ -1.91
USP47-209ENST00000530041 OR8G1Q15617 311 aa3.11□□□□□ -1.91
USP47-209ENST00000530041 TAF9Q16594 264 aa3.11□□□□□ -1.91
USP47-209ENST00000530041 RSPO1Q2MKA7 263 aaPredicted RBP3.11□□□□□ -1.91
USP47-209ENST00000530041 SP6Q3SY56 376 aa3.11□□□□□ -1.91
USP47-209ENST00000530041 KLF17Q5JT82 389 aaPredicted RBP3.11□□□□□ -1.91
USP47-209ENST00000530041 C10orf128Q5T292 105 aa3.11□□□□□ -1.91
USP47-209ENST00000530041 TMEM42Q69YG0 159 aa3.11□□□□□ -1.91
USP47-209ENST00000530041 SLC25A26Q70HW3 274 aa3.11□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms