RNA–Protein interactions for RNA: ENST00000529986.5

CTNND1-223, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,727 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-223ENST00000529986 LRRC37A2A6NM11 1700 aa6.42□□□□□ -1.38
CTNND1-223ENST00000529986 TRAV2A0A0B4J234 112 aa6.42□□□□□ -1.38
CTNND1-223ENST00000529986 FAM181BA6NEQ2 426 aa6.42□□□□□ -1.38
CTNND1-223ENST00000529986 SAA1P0DJI8 122 aaPredicted RBP6.42□□□□□ -1.38
CTNND1-223ENST00000529986 NPPCP23582 126 aa6.42□□□□□ -1.38
CTNND1-223ENST00000529986 PAX2Q02962 417 aa6.42□□□□□ -1.38
CTNND1-223ENST00000529986 FMC1Q96HJ9 113 aa6.42□□□□□ -1.38
CTNND1-223ENST00000529986 MCRIP2Q9BUT9 160 aaKnown RBP6.42□□□□□ -1.38
CTNND1-223ENST00000529986 MRPS16Q9Y3D3 137 aaKnown RBP6.42□□□□□ -1.38
CTNND1-223ENST00000529986 IGHV3OR16-10A0A075B7F0 116 aa6.41□□□□□ -1.38
CTNND1-223ENST00000529986 TRBV7-9A0A0J9YWB2 115 aa6.41□□□□□ -1.38
CTNND1-223ENST00000529986 CEACAM4O75871 244 aa6.41□□□□□ -1.38
CTNND1-223ENST00000529986 TFF1P04155 84 aa6.41□□□□□ -1.38
CTNND1-223ENST00000529986 TEX38Q6PEX7 206 aa6.41□□□□□ -1.38
CTNND1-223ENST00000529986 FBXL15Q9H469 300 aa6.41□□□□□ -1.38
CTNND1-223ENST00000529986 IGHV3-64A0A075B6Q5 118 aa6.41□□□□□ -1.38
CTNND1-223ENST00000529986 PPIAL4CA0A0B4J2A2 164 aa6.41□□□□□ -1.38
CTNND1-223ENST00000529986 A0A1W2PRE2 83 aa6.41□□□□□ -1.38
CTNND1-223ENST00000529986 TMEM262E9PQX1 116 aa6.41□□□□□ -1.38
CTNND1-223ENST00000529986 RAMP3O60896 148 aa6.41□□□□□ -1.38
CTNND1-223ENST00000529986 PPIAL4GP0DN37 164 aa6.41□□□□□ -1.38
CTNND1-223ENST00000529986 PRB3Q04118 309 aaPredicted RBP6.41□□□□□ -1.38
CTNND1-223ENST00000529986 PNKDQ8N490 385 aa6.41□□□□□ -1.38
CTNND1-223ENST00000529986 ZNF837Q96EG3 531 aaPredicted RBP6.41□□□□□ -1.38
CTNND1-223ENST00000529986 A0A0U1RRA0 63 aa6.41□□□□□ -1.38
CTNND1-223ENST00000529986 COX6B1P14854 86 aa6.41□□□□□ -1.38
CTNND1-223ENST00000529986 IGFBP3P17936 291 aaPredicted RBP6.41□□□□□ -1.38
CTNND1-223ENST00000529986 PSMG4Q5JS54 123 aa6.41□□□□□ -1.38
CTNND1-223ENST00000529986 TMEM54Q969K7 222 aa6.41□□□□□ -1.38
CTNND1-223ENST00000529986 GDF15Q99988 308 aa6.41□□□□□ -1.38
CTNND1-223ENST00000529986 C2orf88Q9BSF0 95 aa6.41□□□□□ -1.38
CTNND1-223ENST00000529986 PGPEP1Q9NXJ5 209 aa6.41□□□□□ -1.38
CTNND1-223ENST00000529986 A0A0G2JLM5 398 aa6.41□□□□□ -1.38
CTNND1-223ENST00000529986 STARD6P59095 220 aa6.41□□□□□ -1.38
CTNND1-223ENST00000529986 PLAURQ03405 335 aa6.41□□□□□ -1.38
CTNND1-223ENST00000529986 TMEM155Q4W5P6 130 aa6.41□□□□□ -1.38
CTNND1-223ENST00000529986 SMRP1Q8NCR6 262 aa6.41□□□□□ -1.38
CTNND1-223ENST00000529986 HEATR5BQ9P2D3 2071 aa6.41□□□□□ -1.38
CTNND1-223ENST00000529986 PDCD11Q14690 1871 aaKnown RBP6.41□□□□□ -1.38
CTNND1-223ENST00000529986 APC2O95996 2303 aa6.41□□□□□ -1.38
CTNND1-223ENST00000529986 TRBV24-1A0A075B6N3 115 aa6.41□□□□□ -1.38
CTNND1-223ENST00000529986 A0A0A6YYD4 124 aa6.41□□□□□ -1.38
CTNND1-223ENST00000529986 NPIPB11E5RHQ5 1161 aa6.41□□□□□ -1.38
CTNND1-223ENST00000529986 TIMP3P35625 211 aa6.41□□□□□ -1.38
CTNND1-223ENST00000529986 TMPRSS3P57727 454 aa6.41□□□□□ -1.38
CTNND1-223ENST00000529986 ATP5G2Q06055 141 aa6.41□□□□□ -1.38
CTNND1-223ENST00000529986 OR10J3Q5JRS4 329 aa6.41□□□□□ -1.38
CTNND1-223ENST00000529986 CHCHD2P9Q5T1J5 151 aaPredicted RBP6.41□□□□□ -1.38
CTNND1-223ENST00000529986 OR9G1Q8NH87 305 aa6.41□□□□□ -1.38
CTNND1-223ENST00000529986 A8MWV9 139 aa6.4□□□□□ -1.38
CTNND1-223ENST00000529986 HBDP02042 147 aa6.4□□□□□ -1.38
CTNND1-223ENST00000529986 ASIPP42127 132 aa6.4□□□□□ -1.38
CTNND1-223ENST00000529986 HGFACQ04756 655 aa6.4□□□□□ -1.38
CTNND1-223ENST00000529986 GTSCR1Q86UQ5 136 aa6.4□□□□□ -1.38
CTNND1-223ENST00000529986 GNB1LQ9BYB4 327 aa6.4□□□□□ -1.38
CTNND1-223ENST00000529986 C21orf140B9A014 251 aa6.4□□□□□ -1.38
CTNND1-223ENST00000529986 C9orf172C9J069 976 aa6.4□□□□□ -1.38
CTNND1-223ENST00000529986 DPM2O94777 84 aa6.4□□□□□ -1.38
CTNND1-223ENST00000529986 ADCYAP1P18509 176 aa6.4□□□□□ -1.38
CTNND1-223ENST00000529986 GAGE2BQ13066 116 aa6.4□□□□□ -1.38
CTNND1-223ENST00000529986 UBE2V1Q13404 147 aa6.4□□□□□ -1.38
CTNND1-223ENST00000529986 GAGE2EQ4V326 116 aa6.4□□□□□ -1.38
CTNND1-223ENST00000529986 PAPPA-AS1Q5QFB9 102 aa6.4□□□□□ -1.38
CTNND1-223ENST00000529986 GAGE2DQ9UEU5 116 aa6.4□□□□□ -1.38
CTNND1-223ENST00000529986 ZNF815PA8K554 130 aa6.4□□□□□ -1.39
CTNND1-223ENST00000529986 ZFAND6Q6FIF0 208 aa6.4□□□□□ -1.39
CTNND1-223ENST00000529986 KIR3DL3Q8N743 410 aa6.4□□□□□ -1.39
CTNND1-223ENST00000529986 GTF3AQ92664 365 aaKnown RBP6.4□□□□□ -1.39
CTNND1-223ENST00000529986 FGF11Q92914 225 aa6.4□□□□□ -1.39
CTNND1-223ENST00000529986 SCARF2Q96GP6 870 aaPredicted RBP6.4□□□□□ -1.39
CTNND1-223ENST00000529986 TNFRSF18Q9Y5U5 241 aa6.4□□□□□ -1.39
CTNND1-223ENST00000529986 HS3ST3B1Q9Y662 390 aa6.4□□□□□ -1.39
CTNND1-223ENST00000529986 ZSWIM8A7E2V4 1837 aa6.4□□□□□ -1.39
CTNND1-223ENST00000529986 TDGF1P3P51864 188 aa6.4□□□□□ -1.39
CTNND1-223ENST00000529986 PAQR4Q8N4S7 273 aaPredicted RBP6.4□□□□□ -1.39
CTNND1-223ENST00000529986 PLPPR1Q8TBJ4 325 aa6.4□□□□□ -1.39
CTNND1-223ENST00000529986 TMEM186Q96B77 213 aa6.4□□□□□ -1.39
CTNND1-223ENST00000529986 ST20Q9HBF5 79 aa6.4□□□□□ -1.39
CTNND1-223ENST00000529986 IFI6P09912 130 aa6.39□□□□□ -1.39
CTNND1-223ENST00000529986 RNASE4P34096 147 aaKnown RBP6.39□□□□□ -1.39
CTNND1-223ENST00000529986 NPC2P61916 151 aa6.39□□□□□ -1.39
CTNND1-223ENST00000529986 HSD52Q0P140 79 aa6.39□□□□□ -1.39
CTNND1-223ENST00000529986 ACP7Q6ZNF0 438 aa6.39□□□□□ -1.39
CTNND1-223ENST00000529986 REPIN1Q9BWE0 567 aaKnown RBP6.39□□□□□ -1.39
CTNND1-223ENST00000529986 TRAV8-1A0A0A6YYK1 113 aa6.39□□□□□ -1.39
CTNND1-223ENST00000529986 TRAV5A0A0B4J249 113 aa6.39□□□□□ -1.39
CTNND1-223ENST00000529986 KBTBD11-OT1A0A1B0GTJ5 212 aa6.39□□□□□ -1.39
CTNND1-223ENST00000529986 SEC11AP67812 179 aa6.39□□□□□ -1.39
CTNND1-223ENST00000529986 CD300EQ496F6 205 aaPredicted RBP6.39□□□□□ -1.39
CTNND1-223ENST00000529986 OCIAD2Q56VL3 154 aa6.39□□□□□ -1.39
CTNND1-223ENST00000529986 STPG1Q5TH74 334 aa6.39□□□□□ -1.39
CTNND1-223ENST00000529986 BCL6BQ8N143 479 aaPredicted RBP6.39□□□□□ -1.39
CTNND1-223ENST00000529986 OSTCQ9NRP0 149 aa6.39□□□□□ -1.39
CTNND1-223ENST00000529986 CYSLTR1Q9Y271 337 aa6.39□□□□□ -1.39
CTNND1-223ENST00000529986 NEUROG3Q9Y4Z2 214 aa6.39□□□□□ -1.39
CTNND1-223ENST00000529986 IGKV1-9A0A0C4DH69 117 aa6.39□□□□□ -1.39
CTNND1-223ENST00000529986 SPAARA0A1B0GVQ0 90 aa6.39□□□□□ -1.39
CTNND1-223ENST00000529986 IGKCP01834 107 aa6.39□□□□□ -1.39
CTNND1-223ENST00000529986 RFPL3SP0C7P2 107 aa6.39□□□□□ -1.39
CTNND1-223ENST00000529986 ESDP10768 282 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms