RNA–Protein interactions for RNA: ENST00000529873.5

CTNND1-221, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,931 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-221ENST00000529873 FLVCR1-AS1Q8TAF5 88 aa7.14□□□□□ -1.27
CTNND1-221ENST00000529873 A8MWV9 139 aa7.13□□□□□ -1.27
CTNND1-221ENST00000529873 CGAP01215 116 aa7.13□□□□□ -1.27
CTNND1-221ENST00000529873 RNASE4P34096 147 aaKnown RBP7.13□□□□□ -1.27
CTNND1-221ENST00000529873 FAM201AQ5SY85 155 aa7.13□□□□□ -1.27
CTNND1-221ENST00000529873 CLEC19AQ6UXS0 136 aa7.13□□□□□ -1.27
CTNND1-221ENST00000529873 KCNS1Q96KK3 526 aa7.13□□□□□ -1.27
CTNND1-221ENST00000529873 DUX3Q96PT4 197 aa7.13□□□□□ -1.27
CTNND1-221ENST00000529873 TUBA4BQ9H853 241 aa7.13□□□□□ -1.27
CTNND1-221ENST00000529873 SDF2L1Q9HCN8 221 aa7.13□□□□□ -1.27
CTNND1-221ENST00000529873 IGHV3-48P01763 117 aa7.13□□□□□ -1.27
CTNND1-221ENST00000529873 LTBRP36941 435 aa7.13□□□□□ -1.27
CTNND1-221ENST00000529873 PSG7Q13046 419 aa7.13□□□□□ -1.27
CTNND1-221ENST00000529873 WDR82Q6UXN9 313 aa7.13□□□□□ -1.27
CTNND1-221ENST00000529873 COLCA1Q6ZS62 124 aa7.13□□□□□ -1.27
CTNND1-221ENST00000529873 LYZL4Q96KX0 146 aa7.13□□□□□ -1.27
CTNND1-221ENST00000529873 RPP21Q9H633 154 aaKnown RBP7.13□□□□□ -1.27
CTNND1-221ENST00000529873 TNFRSF18Q9Y5U5 241 aa7.13□□□□□ -1.27
CTNND1-221ENST00000529873 IGKV3-20P01619 116 aa7.13□□□□□ -1.27
CTNND1-221ENST00000529873 UCP1P25874 307 aa7.13□□□□□ -1.27
CTNND1-221ENST00000529873 TBR1Q16650 682 aa7.13□□□□□ -1.27
CTNND1-221ENST00000529873 GTSF1LQ9H1H1 148 aa7.13□□□□□ -1.27
CTNND1-221ENST00000529873 C21orf62Q9NYP8 219 aa7.13□□□□□ -1.27
CTNND1-221ENST00000529873 SAA2-SAA4A0A096LPE2 208 aa7.13□□□□□ -1.27
CTNND1-221ENST00000529873 SCO2A0A1W2PP80 73 aa7.13□□□□□ -1.27
CTNND1-221ENST00000529873 LINC00271P0C7V0 271 aa7.13□□□□□ -1.27
CTNND1-221ENST00000529873 SAA2P0DJI9 122 aaPredicted RBP7.13□□□□□ -1.27
CTNND1-221ENST00000529873 CCL1P22362 96 aa7.13□□□□□ -1.27
CTNND1-221ENST00000529873 ZNF497Q6ZNH5 498 aa7.13□□□□□ -1.27
CTNND1-221ENST00000529873 PLPPR1Q8TBJ4 325 aa7.13□□□□□ -1.27
CTNND1-221ENST00000529873 NXT2Q9NPJ8 142 aaKnown RBP7.13□□□□□ -1.27
CTNND1-221ENST00000529873 ZFC3H1O60293 1989 aaKnown RBP7.13□□□□□ -1.27
CTNND1-221ENST00000529873 TRAV9-1A0A075B6T8 112 aa7.12□□□□□ -1.27
CTNND1-221ENST00000529873 PROB1E7EW31 1015 aa7.12□□□□□ -1.27
CTNND1-221ENST00000529873 H3BUT2 72 aa7.12□□□□□ -1.27
CTNND1-221ENST00000529873 OCIAD2Q56VL3 154 aa7.12□□□□□ -1.27
CTNND1-221ENST00000529873 Q5BKY6 102 aa7.12□□□□□ -1.27
CTNND1-221ENST00000529873 C1orf43Q9BWL3 253 aa7.12□□□□□ -1.27
CTNND1-221ENST00000529873 OTORQ9NRC9 128 aa7.12□□□□□ -1.27
CTNND1-221ENST00000529873 GGTLC3B5MD39 225 aa7.12□□□□□ -1.27
CTNND1-221ENST00000529873 YPEL1O60688 119 aa7.12□□□□□ -1.27
CTNND1-221ENST00000529873 GPR183P32249 361 aa7.12□□□□□ -1.27
CTNND1-221ENST00000529873 ATXN8Q156A1 80 aa7.12□□□□□ -1.27
CTNND1-221ENST00000529873 YPEL2Q96QA6 119 aa7.12□□□□□ -1.27
CTNND1-221ENST00000529873 WNT10AQ9GZT5 417 aa7.12□□□□□ -1.27
CTNND1-221ENST00000529873 SPRR3Q9UBC9 169 aa7.12□□□□□ -1.27
CTNND1-221ENST00000529873 NYNRINQ9P2P1 1898 aaKnown RBP7.12□□□□□ -1.27
CTNND1-221ENST00000529873 IGKV3OR2-268A0A0C4DH90 116 aa7.12□□□□□ -1.27
CTNND1-221ENST00000529873 UPK2O00526 184 aa7.12□□□□□ -1.27
CTNND1-221ENST00000529873 NBEAP1P0C6P0 100 aa7.12□□□□□ -1.27
CTNND1-221ENST00000529873 ITLN2Q8WWU7 325 aaPredicted RBP7.12□□□□□ -1.27
CTNND1-221ENST00000529873 Q9H3A6 140 aa7.12□□□□□ -1.27
CTNND1-221ENST00000529873 SEMA5BQ9P283 1151 aa7.12□□□□□ -1.27
CTNND1-221ENST00000529873 ARID1BQ8NFD5 2236 aaPredicted RBP7.12□□□□□ -1.27
CTNND1-221ENST00000529873 NBR2O15453 112 aa7.12□□□□□ -1.27
CTNND1-221ENST00000529873 RAMP3O60896 148 aa7.12□□□□□ -1.27
CTNND1-221ENST00000529873 TDGF1P3P51864 188 aa7.12□□□□□ -1.27
CTNND1-221ENST00000529873 LRTM2Q8N967 370 aa7.12□□□□□ -1.27
CTNND1-221ENST00000529873 CACNG8Q8WXS5 425 aa7.12□□□□□ -1.27
CTNND1-221ENST00000529873 RCC1LQ96I51 464 aaKnown RBP7.12□□□□□ -1.27
CTNND1-221ENST00000529873 SCGB3A1Q96QR1 104 aa7.12□□□□□ -1.27
CTNND1-221ENST00000529873 S4R3C0 116 aa7.12□□□□□ -1.27
CTNND1-221ENST00000529873 TRBV6-7A0A0A0MS04 114 aa7.12□□□□□ -1.27
CTNND1-221ENST00000529873 GRIFINA4D1Z8 144 aa7.12□□□□□ -1.27
CTNND1-221ENST00000529873 A8MXK9 166 aa7.12□□□□□ -1.27
CTNND1-221ENST00000529873 LYPD3O95274 346 aa7.12□□□□□ -1.27
CTNND1-221ENST00000529873 THBDP07204 575 aa7.12□□□□□ -1.27
CTNND1-221ENST00000529873 SAA1P0DJI8 122 aaPredicted RBP7.12□□□□□ -1.27
CTNND1-221ENST00000529873 CARHSP1Q9Y2V2 147 aaKnown RBP7.12□□□□□ -1.27
CTNND1-221ENST00000529873 TRPM6Q9BX84 2022 aa7.12□□□□□ -1.27
CTNND1-221ENST00000529873 A0A1B0GTI1 187 aa7.11□□□□□ -1.27
CTNND1-221ENST00000529873 IZUMO1RA6ND01 250 aa7.11□□□□□ -1.27
CTNND1-221ENST00000529873 C9JCJ5 164 aa7.11□□□□□ -1.27
CTNND1-221ENST00000529873 SSBP2P81877 361 aaPredicted RBP7.11□□□□□ -1.27
CTNND1-221ENST00000529873 MIR17HGQ75NE6 70 aa7.11□□□□□ -1.27
CTNND1-221ENST00000529873 TMEM144Q7Z5S9 345 aa7.11□□□□□ -1.27
CTNND1-221ENST00000529873 NR2C2APQ86WQ0 139 aa7.11□□□□□ -1.27
CTNND1-221ENST00000529873 MS4A6AQ9H2W1 248 aa7.11□□□□□ -1.27
CTNND1-221ENST00000529873 MYO9BQ13459 2157 aa7.11□□□□□ -1.27
CTNND1-221ENST00000529873 LTBP1Q14766 1721 aa7.11□□□□□ -1.27
CTNND1-221ENST00000529873 IGHV1-18A0A0C4DH31 117 aa7.11□□□□□ -1.27
CTNND1-221ENST00000529873 PGPEP1LA6NFU8 196 aa7.11□□□□□ -1.27
CTNND1-221ENST00000529873 C15orf61A6NNL5 157 aa7.11□□□□□ -1.27
CTNND1-221ENST00000529873 KIAA1644Q3SXP7 199 aa7.11□□□□□ -1.27
CTNND1-221ENST00000529873 SLC25A2Q9BXI2 301 aa7.11□□□□□ -1.27
CTNND1-221ENST00000529873 PRDM13Q9H4Q3 707 aa7.11□□□□□ -1.27
CTNND1-221ENST00000529873 SHISA3A0PJX4 238 aa7.11□□□□□ -1.27
CTNND1-221ENST00000529873 PSMB11A5LHX3 300 aa7.11□□□□□ -1.27
CTNND1-221ENST00000529873 FAM90A9PA6NNJ1 464 aa7.11□□□□□ -1.27
CTNND1-221ENST00000529873 CDK2AP2O75956 126 aa7.11□□□□□ -1.27
CTNND1-221ENST00000529873 C5orf47Q569G3 176 aa7.11□□□□□ -1.27
CTNND1-221ENST00000529873 Q6AWC8 147 aa7.11□□□□□ -1.27
CTNND1-221ENST00000529873 C7orf69Q9H7B7 122 aa7.11□□□□□ -1.27
CTNND1-221ENST00000529873 SCN10AQ9Y5Y9 1956 aa7.11□□□□□ -1.27
CTNND1-221ENST00000529873 MTCL1Q9Y4B5 1905 aaKnown RBP7.11□□□□□ -1.27
CTNND1-221ENST00000529873 TRAV24A0A0B4J272 114 aa7.11□□□□□ -1.27
CTNND1-221ENST00000529873 LGALS1P09382 135 aaKnown RBP7.11□□□□□ -1.27
CTNND1-221ENST00000529873 ZNF837Q96EG3 531 aaPredicted RBP7.11□□□□□ -1.27
CTNND1-221ENST00000529873 CSRP1P21291 193 aaKnown RBP7.11□□□□□ -1.27
CTNND1-221ENST00000529873 ZFP36L1Q07352 338 aaKnown RBP7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms