RNA–Protein interactions for RNA: ENST00000529540.5

NR1H3-231, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 2

Gene NR1H3, Length 1,673 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-231ENST00000529540 FKBP11Q9NYL4 201 aa11.84□□□□□ -0.51
NR1H3-231ENST00000529540 CALYQ9NYX4 217 aa11.84□□□□□ -0.51
NR1H3-231ENST00000529540 TRAV9-1A0A075B6T8 112 aa11.84□□□□□ -0.51
NR1H3-231ENST00000529540 C12orf77C9JDV5 145 aa11.84□□□□□ -0.51
NR1H3-231ENST00000529540 FCN3O75636 299 aa11.84□□□□□ -0.51
NR1H3-231ENST00000529540 KRASP01116 189 aa11.84□□□□□ -0.51
NR1H3-231ENST00000529540 GATA3P23771 443 aa11.84□□□□□ -0.51
NR1H3-231ENST00000529540 BRWD1-AS2P59051 145 aa11.84□□□□□ -0.51
NR1H3-231ENST00000529540 YPEL3P61236 119 aaPredicted RBP11.84□□□□□ -0.51
NR1H3-231ENST00000529540 ZNF816Q0VGE8 651 aaPredicted RBP11.84□□□□□ -0.51
NR1H3-231ENST00000529540 KRTAP1-3Q8IUG1 177 aa11.84□□□□□ -0.51
NR1H3-231ENST00000529540 OR1L1Q8NH94 360 aa11.84□□□□□ -0.51
NR1H3-231ENST00000529540 UBALD1Q8TB05 177 aa11.84□□□□□ -0.51
NR1H3-231ENST00000529540 C1orf159Q96HA4 380 aa11.84□□□□□ -0.51
NR1H3-231ENST00000529540 JPT1Q9UK76 154 aa11.84□□□□□ -0.51
NR1H3-231ENST00000529540 TRAPPC1Q9Y5R8 145 aa11.84□□□□□ -0.51
NR1H3-231ENST00000529540 TACC2O95359 2948 aa11.84□□□□□ -0.51
NR1H3-231ENST00000529540 C15orf62A8K5M9 175 aa11.83□□□□□ -0.52
NR1H3-231ENST00000529540 C17orf98A8MV24 154 aa11.83□□□□□ -0.52
NR1H3-231ENST00000529540 M0R1W7 72 aa11.83□□□□□ -0.52
NR1H3-231ENST00000529540 F2RL2O00254 374 aa11.83□□□□□ -0.52
NR1H3-231ENST00000529540 MPDU1O75352 247 aa11.83□□□□□ -0.52
NR1H3-231ENST00000529540 HBZP02008 142 aa11.83□□□□□ -0.52
NR1H3-231ENST00000529540 CGB3P0DN86 165 aa11.83□□□□□ -0.52
NR1H3-231ENST00000529540 CGB7P0DN87 165 aa11.83□□□□□ -0.52
NR1H3-231ENST00000529540 CHRNA7P36544 502 aa11.83□□□□□ -0.52
NR1H3-231ENST00000529540 C1orf122Q6ZSJ8 110 aa11.83□□□□□ -0.52
NR1H3-231ENST00000529540 HECTD1Q9ULT8 2610 aa11.83□□□□□ -0.52
NR1H3-231ENST00000529540 A0A096LNT2 108 aa11.82□□□□□ -0.52
NR1H3-231ENST00000529540 IGHV2-70DA0A0C4DH43 119 aa11.82□□□□□ -0.52
NR1H3-231ENST00000529540 A0A0U1RQK1 487 aa11.82□□□□□ -0.52
NR1H3-231ENST00000529540 ZNF320A2RRD8 509 aa11.82□□□□□ -0.52
NR1H3-231ENST00000529540 FAM90A9PA6NNJ1 464 aa11.82□□□□□ -0.52
NR1H3-231ENST00000529540 C15orf65H3BRN8 121 aa11.82□□□□□ -0.52
NR1H3-231ENST00000529540 OR10J1P30954 320 aa11.82□□□□□ -0.52
NR1H3-231ENST00000529540 SSTR5P35346 364 aa11.82□□□□□ -0.52
NR1H3-231ENST00000529540 TEX38Q6PEX7 206 aa11.82□□□□□ -0.52
NR1H3-231ENST00000529540 TCF23Q7RTU1 214 aa11.82□□□□□ -0.52
NR1H3-231ENST00000529540 H2BFWTQ7Z2G1 175 aa11.82□□□□□ -0.52
NR1H3-231ENST00000529540 ZDHHC16Q969W1 377 aa11.82□□□□□ -0.52
NR1H3-231ENST00000529540 IDI2-AS1Q9NZ38 188 aa11.82□□□□□ -0.52
NR1H3-231ENST00000529540 NAGKQ9UJ70 344 aa11.82□□□□□ -0.52
NR1H3-231ENST00000529540 C22orf46C9J442 243 aa11.81□□□□□ -0.52
NR1H3-231ENST00000529540 RNF223E7ERA6 249 aa11.81□□□□□ -0.52
NR1H3-231ENST00000529540 M0R143 59 aa11.81□□□□□ -0.52
NR1H3-231ENST00000529540 MSMBP08118 114 aa11.81□□□□□ -0.52
NR1H3-231ENST00000529540 SELENOTP62341 195 aa11.81□□□□□ -0.52
NR1H3-231ENST00000529540 C17orf58Q2M2W7 97 aa11.81□□□□□ -0.52
NR1H3-231ENST00000529540 LINC01356Q8N9X3 169 aa11.81□□□□□ -0.52
NR1H3-231ENST00000529540 HSD17B10Q99714 261 aaKnown RBP11.81□□□□□ -0.52
NR1H3-231ENST00000529540 SNHG12Q9BXW3 62 aa11.81□□□□□ -0.52
NR1H3-231ENST00000529540 MDFIC2A0A1B0GVS7 189 aa11.81□□□□□ -0.52
NR1H3-231ENST00000529540 ESDP10768 282 aa11.81□□□□□ -0.52
NR1H3-231ENST00000529540 RAB4AP20338 218 aa11.81□□□□□ -0.52
NR1H3-231ENST00000529540 OPRK1P41145 380 aa11.81□□□□□ -0.52
NR1H3-231ENST00000529540 ATP5G3P48201 142 aa11.81□□□□□ -0.52
NR1H3-231ENST00000529540 PRSS8Q16651 343 aa11.81□□□□□ -0.52
NR1H3-231ENST00000529540 OR52L2PQ8NGH6 319 aa11.81□□□□□ -0.52
NR1H3-231ENST00000529540 SFRP2Q96HF1 295 aa11.81□□□□□ -0.52
NR1H3-231ENST00000529540 GNG12Q9UBI6 72 aa11.81□□□□□ -0.52
NR1H3-231ENST00000529540 YPEL1O60688 119 aa11.8□□□□□ -0.52
NR1H3-231ENST00000529540 ZFP36P26651 326 aaKnown RBP11.8□□□□□ -0.52
NR1H3-231ENST00000529540 CD1BP29016 333 aa11.8□□□□□ -0.52
NR1H3-231ENST00000529540 RPP30P78346 268 aaKnown RBP11.8□□□□□ -0.52
NR1H3-231ENST00000529540 PAX2Q02962 417 aa11.8□□□□□ -0.52
NR1H3-231ENST00000529540 WFDC11Q8NEX6 87 aa11.8□□□□□ -0.52
NR1H3-231ENST00000529540 YPEL2Q96QA6 119 aa11.8□□□□□ -0.52
NR1H3-231ENST00000529540 ONECUT1Q9UBC0 465 aa11.8□□□□□ -0.52
NR1H3-231ENST00000529540 NBPF19A0A087WUL8 3843 aa11.79□□□□□ -0.52
NR1H3-231ENST00000529540 M0QZK8 103 aa11.79□□□□□ -0.52
NR1H3-231ENST00000529540 ITGB1BP1O14713 200 aa11.79□□□□□ -0.52
NR1H3-231ENST00000529540 NDUFB4O95168 129 aa11.79□□□□□ -0.52
NR1H3-231ENST00000529540 SCGB1D1O95968 90 aa11.79□□□□□ -0.52
NR1H3-231ENST00000529540 STAG3L2P0CL84 134 aa11.79□□□□□ -0.52
NR1H3-231ENST00000529540 STAG3L3P0CL85 134 aa11.79□□□□□ -0.52
NR1H3-231ENST00000529540 IGHV1-8P0DP01 117 aa11.79□□□□□ -0.52
NR1H3-231ENST00000529540 CCL3L1P16619 93 aa11.79□□□□□ -0.52
NR1H3-231ENST00000529540 DLX6P56179 175 aa11.79□□□□□ -0.52
NR1H3-231ENST00000529540 PAFAH1B2P68402 229 aa11.79□□□□□ -0.52
NR1H3-231ENST00000529540 PDLIM3Q53GG5 364 aaPredicted RBP11.79□□□□□ -0.52
NR1H3-231ENST00000529540 R3HDM4Q96D70 268 aa11.79□□□□□ -0.52
NR1H3-231ENST00000529540 MS4A10Q96PG2 267 aa11.79□□□□□ -0.52
NR1H3-231ENST00000529540 INSIG2Q9Y5U4 225 aa11.79□□□□□ -0.52
NR1H3-231ENST00000529540 POLQO75417 2590 aa11.79□□□□□ -0.52
NR1H3-231ENST00000529540 A0A1W2PPV4 95 aa11.78□□□□□ -0.52
NR1H3-231ENST00000529540 RAB7AP51149 207 aa11.78□□□□□ -0.52
NR1H3-231ENST00000529540 TMEM256Q8N2U0 113 aa11.78□□□□□ -0.52
NR1H3-231ENST00000529540 C8orf31Q8N9H6 132 aa11.78□□□□□ -0.52
NR1H3-231ENST00000529540 ZNF114Q8NC26 417 aa11.78□□□□□ -0.52
NR1H3-231ENST00000529540 OR5T1Q8NG75 326 aa11.78□□□□□ -0.52
NR1H3-231ENST00000529540 OR52E5Q8NH55 327 aa11.78□□□□□ -0.52
NR1H3-231ENST00000529540 RFESDQ8TAC1 157 aa11.78□□□□□ -0.52
NR1H3-231ENST00000529540 TNFRSF14Q92956 283 aa11.78□□□□□ -0.52
NR1H3-231ENST00000529540 C20orf144Q9BQM9 153 aa11.78□□□□□ -0.52
NR1H3-231ENST00000529540 QTRT1Q9BXR0 403 aaKnown RBP11.78□□□□□ -0.52
NR1H3-231ENST00000529540 LY96Q9Y6Y9 160 aa11.78□□□□□ -0.52
NR1H3-231ENST00000529540 MALRD1Q5VYJ5 2156 aa11.78□□□□□ -0.52
NR1H3-231ENST00000529540 J3QLI3 93 aa11.78□□□□□ -0.52
NR1H3-231ENST00000529540 RBFOX2O43251 390 aaKnown RBP eCLIP11.78□□□□□ -0.52
NR1H3-231ENST00000529540 CXorf1O96002 111 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 79.3 ms