RNA–Protein interactions for RNA: ENST00000528396.5

CAPN1-215, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-215ENST00000528396 LGALS9O00182 355 aa10.2□□□□□ -0.78
CAPN1-215ENST00000528396 CCR6P51684 374 aa10.2□□□□□ -0.78
CAPN1-215ENST00000528396 MFAP2P55001 183 aa10.2□□□□□ -0.78
CAPN1-215ENST00000528396 PRKDCP78527 4128 aaKnown RBP10.2□□□□□ -0.78
CAPN1-215ENST00000528396 SPSB3Q6PJ21 355 aa10.2□□□□□ -0.78
CAPN1-215ENST00000528396 GPR146Q96CH1 333 aa10.2□□□□□ -0.78
CAPN1-215ENST00000528396 ATP6V0BQ99437 205 aa10.2□□□□□ -0.78
CAPN1-215ENST00000528396 C7orf50Q9BRJ6 194 aaKnown RBP10.2□□□□□ -0.78
CAPN1-215ENST00000528396 SIGLEC8Q9NYZ4 499 aa10.2□□□□□ -0.78
CAPN1-215ENST00000528396 SHPKQ9UHJ6 478 aa10.2□□□□□ -0.78
CAPN1-215ENST00000528396 DNAH3Q8TD57 4116 aa10.19□□□□□ -0.78
CAPN1-215ENST00000528396 IGHV3-35A0A0C4DH35 117 aa10.19□□□□□ -0.78
CAPN1-215ENST00000528396 K7EIM0 57 aa10.19□□□□□ -0.78
CAPN1-215ENST00000528396 CORTO00230 105 aa10.19□□□□□ -0.78
CAPN1-215ENST00000528396 NUPL2O15504 423 aaKnown RBP10.19□□□□□ -0.78
CAPN1-215ENST00000528396 MT-CO2P00403 227 aa10.19□□□□□ -0.78
CAPN1-215ENST00000528396 IL7P13232 177 aa10.19□□□□□ -0.78
CAPN1-215ENST00000528396 MFAP4P55083 255 aa10.19□□□□□ -0.78
CAPN1-215ENST00000528396 SUPT4H1P63272 117 aaKnown RBP10.19□□□□□ -0.78
CAPN1-215ENST00000528396 IL34Q6ZMJ4 242 aa10.19□□□□□ -0.78
CAPN1-215ENST00000528396 Q6ZRM9 215 aa10.19□□□□□ -0.78
CAPN1-215ENST00000528396 LYZL2Q7Z4W2 148 aa10.19□□□□□ -0.78
CAPN1-215ENST00000528396 GTSCR1Q86UQ5 136 aa10.19□□□□□ -0.78
CAPN1-215ENST00000528396 OR52E5Q8NH55 327 aa10.19□□□□□ -0.78
CAPN1-215ENST00000528396 OR1S1Q8NH92 325 aa10.19□□□□□ -0.78
CAPN1-215ENST00000528396 HIPK2Q9H2X6 1198 aa10.19□□□□□ -0.78
CAPN1-215ENST00000528396 UFC1Q9Y3C8 167 aa10.19□□□□□ -0.78
CAPN1-215ENST00000528396 SMAD5-AS1Q9Y6J3 95 aa10.19□□□□□ -0.78
CAPN1-215ENST00000528396 C2orf70A6NJV1 201 aa10.18□□□□□ -0.78
CAPN1-215ENST00000528396 INS-IGF2F8WCM5 200 aa10.18□□□□□ -0.78
CAPN1-215ENST00000528396 GNG7O60262 68 aa10.18□□□□□ -0.78
CAPN1-215ENST00000528396 SCGB2A1O75556 95 aa10.18□□□□□ -0.78
CAPN1-215ENST00000528396 NXPH3O95157 252 aa10.18□□□□□ -0.78
CAPN1-215ENST00000528396 FOLR2P14207 255 aa10.18□□□□□ -0.78
CAPN1-215ENST00000528396 NPBWR1P48145 328 aa10.18□□□□□ -0.78
CAPN1-215ENST00000528396 UBE2MP61081 183 aaKnown RBP10.18□□□□□ -0.78
CAPN1-215ENST00000528396 RELQ04864 619 aaPredicted RBP10.18□□□□□ -0.78
CAPN1-215ENST00000528396 SMCO1Q147U7 214 aa10.18□□□□□ -0.78
CAPN1-215ENST00000528396 DUSP18Q8NEJ0 188 aa10.18□□□□□ -0.78
CAPN1-215ENST00000528396 OR2K2Q8NGT1 345 aa10.18□□□□□ -0.78
CAPN1-215ENST00000528396 TXN2Q99757 166 aa10.18□□□□□ -0.78
CAPN1-215ENST00000528396 TECRQ9NZ01 308 aaKnown RBP10.18□□□□□ -0.78
CAPN1-215ENST00000528396 DUXBA0A1W2PPF3 345 aa10.17□□□□□ -0.78
CAPN1-215ENST00000528396 A8MWP6 167 aa10.17□□□□□ -0.78
CAPN1-215ENST00000528396 YIF1AO95070 293 aa10.17□□□□□ -0.78
CAPN1-215ENST00000528396 NDUFB6O95139 128 aa10.17□□□□□ -0.78
CAPN1-215ENST00000528396 IGHV3-48P01763 117 aa10.17□□□□□ -0.78
CAPN1-215ENST00000528396 OPRK1P41145 380 aa10.17□□□□□ -0.78
CAPN1-215ENST00000528396 HTR2BP41595 481 aa10.17□□□□□ -0.78
CAPN1-215ENST00000528396 PPP1R1AQ13522 171 aa10.17□□□□□ -0.78
CAPN1-215ENST00000528396 GUCA2BQ16661 112 aa10.17□□□□□ -0.78
CAPN1-215ENST00000528396 CNPY1Q3B7I2 92 aa10.17□□□□□ -0.78
CAPN1-215ENST00000528396 NOXA1Q86UR1 476 aa10.17□□□□□ -0.78
CAPN1-215ENST00000528396 S100ZQ8WXG8 99 aa10.17□□□□□ -0.78
CAPN1-215ENST00000528396 MARC2Q969Z3 335 aa10.17□□□□□ -0.78
CAPN1-215ENST00000528396 B9D2Q9BPU9 175 aa10.17□□□□□ -0.78
CAPN1-215ENST00000528396 C20orf24Q9BUV8 137 aa10.17□□□□□ -0.78
CAPN1-215ENST00000528396 A0A1B0GU03 582 aa10.16□□□□□ -0.78
CAPN1-215ENST00000528396 I3L2K1 104 aa10.16□□□□□ -0.78
CAPN1-215ENST00000528396 NDUFA4O00483 81 aa10.16□□□□□ -0.78
CAPN1-215ENST00000528396 SFT2D2O95562 160 aa10.16□□□□□ -0.78
CAPN1-215ENST00000528396 RNASE2P10153 161 aaKnown RBP10.16□□□□□ -0.78
CAPN1-215ENST00000528396 CBLN1P23435 193 aa10.16□□□□□ -0.78
CAPN1-215ENST00000528396 CD300EQ496F6 205 aaPredicted RBP10.16□□□□□ -0.78
CAPN1-215ENST00000528396 AARDQ4LEZ3 155 aa10.16□□□□□ -0.78
CAPN1-215ENST00000528396 C4orf46Q504U0 113 aa10.16□□□□□ -0.78
CAPN1-215ENST00000528396 TM4SF20Q53R12 229 aa10.16□□□□□ -0.78
CAPN1-215ENST00000528396 NMSQ5H8A3 153 aa10.16□□□□□ -0.78
CAPN1-215ENST00000528396 LINC00299Q6ZSB3 139 aa10.16□□□□□ -0.78
CAPN1-215ENST00000528396 UXS1Q8NBZ7 420 aa10.16□□□□□ -0.78
CAPN1-215ENST00000528396 SLC24A4Q8NFF2 622 aa10.16□□□□□ -0.78
CAPN1-215ENST00000528396 CACNG8Q8WXS5 425 aa10.16□□□□□ -0.78
CAPN1-215ENST00000528396 SDHCQ99643 169 aaPredicted RBP10.16□□□□□ -0.78
CAPN1-215ENST00000528396 CHRDL1Q9BU40 450 aa10.16□□□□□ -0.78
CAPN1-215ENST00000528396 LSM4Q9Y4Z0 139 aaKnown RBP10.16□□□□□ -0.78
CAPN1-215ENST00000528396 RPS10-NUDT3A0A1W2PQS6 291 aa10.15□□□□□ -0.78
CAPN1-215ENST00000528396 TMEM213A2RRL7 107 aa10.15□□□□□ -0.78
CAPN1-215ENST00000528396 A6NHS1 94 aa10.15□□□□□ -0.78
CAPN1-215ENST00000528396 IFNA10P01566 189 aa10.15□□□□□ -0.78
CAPN1-215ENST00000528396 ELLP55199 621 aaPredicted RBP10.15□□□□□ -0.78
CAPN1-215ENST00000528396 TNFRSF9Q07011 255 aa10.15□□□□□ -0.78
CAPN1-215ENST00000528396 ANKRD55Q3KP44 614 aa10.15□□□□□ -0.78
CAPN1-215ENST00000528396 UNQ9165/PRO28630Q6UXU0 137 aa10.15□□□□□ -0.78
CAPN1-215ENST00000528396 COQ8AQ8NI60 647 aa10.15□□□□□ -0.78
CAPN1-215ENST00000528396 TMEM190Q8WZ59 177 aa10.15□□□□□ -0.78
CAPN1-215ENST00000528396 CCDC32Q9BV29 185 aa10.15□□□□□ -0.78
CAPN1-215ENST00000528396 ZNF436Q9C0F3 470 aaPredicted RBP10.15□□□□□ -0.78
CAPN1-215ENST00000528396 DAZ1Q9NQZ3 744 aaKnown RBP10.15□□□□□ -0.78
CAPN1-215ENST00000528396 MRPL27Q9P0M9 148 aaKnown RBP10.15□□□□□ -0.78
CAPN1-215ENST00000528396 TMED3Q9Y3Q3 217 aa10.15□□□□□ -0.78
CAPN1-215ENST00000528396 LYRM1O43325 122 aa10.14□□□□□ -0.79
CAPN1-215ENST00000528396 CTSGP08311 255 aa10.14□□□□□ -0.79
CAPN1-215ENST00000528396 HOXB5P09067 269 aa10.14□□□□□ -0.79
CAPN1-215ENST00000528396 NPY1RP25929 384 aa10.14□□□□□ -0.79
CAPN1-215ENST00000528396 FCGR2BP31994 310 aaPredicted RBP10.14□□□□□ -0.79
CAPN1-215ENST00000528396 DEFB114Q30KQ6 69 aa10.14□□□□□ -0.79
CAPN1-215ENST00000528396 RBPMS2Q6ZRY4 209 aaKnown RBP10.14□□□□□ -0.79
CAPN1-215ENST00000528396 LRTM2Q8N967 370 aa10.14□□□□□ -0.79
CAPN1-215ENST00000528396 DTD1Q8TEA8 209 aa10.14□□□□□ -0.79
CAPN1-215ENST00000528396 RBKSQ9H477 322 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms