RNA–Protein interactions for RNA: ENST00000527916.1

CPSF1-203, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 506 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-203ENST00000527916 TP53TG1Q9Y2A0 90 aa7.83□□□□□ -1.16
CPSF1-203ENST00000527916 VPS13DQ5THJ4 4388 aa7.83□□□□□ -1.16
CPSF1-203ENST00000527916 ABCA13Q86UQ4 5058 aa7.83□□□□□ -1.16
CPSF1-203ENST00000527916 C15orf62A8K5M9 175 aa7.82□□□□□ -1.16
CPSF1-203ENST00000527916 TSPAN4O14817 238 aa7.82□□□□□ -1.16
CPSF1-203ENST00000527916 CTSGP08311 255 aa7.82□□□□□ -1.16
CPSF1-203ENST00000527916 P0C879 139 aa7.82□□□□□ -1.16
CPSF1-203ENST00000527916 PGAM2P15259 253 aa7.82□□□□□ -1.16
CPSF1-203ENST00000527916 ADMP35318 185 aa7.82□□□□□ -1.16
CPSF1-203ENST00000527916 MFAP4P55083 255 aa7.82□□□□□ -1.16
CPSF1-203ENST00000527916 PIGPP57054 158 aa7.82□□□□□ -1.16
CPSF1-203ENST00000527916 TAS2R19P59542 299 aa7.82□□□□□ -1.16
CPSF1-203ENST00000527916 ERHP84090 104 aaKnown RBP7.82□□□□□ -1.16
CPSF1-203ENST00000527916 EWSR1Q01844 656 aaKnown RBP eCLIP7.82□□□□□ -1.16
CPSF1-203ENST00000527916 PHLDA1Q8WV24 401 aaPredicted RBP7.82□□□□□ -1.16
CPSF1-203ENST00000527916 MRGPRFQ96AM1 343 aa7.82□□□□□ -1.16
CPSF1-203ENST00000527916 SPAG8Q99932 426 aaPredicted RBP7.82□□□□□ -1.16
CPSF1-203ENST00000527916 BCL7BQ9BQE9 202 aa7.82□□□□□ -1.16
CPSF1-203ENST00000527916 MIXL1Q9H2W2 232 aa7.82□□□□□ -1.16
CPSF1-203ENST00000527916 RABL2AQ9UBK7 228 aaPredicted RBP7.82□□□□□ -1.16
CPSF1-203ENST00000527916 RABL2BQ9UNT1 228 aa7.82□□□□□ -1.16
CPSF1-203ENST00000527916 IGHV3-35A0A0C4DH35 117 aa7.81□□□□□ -1.16
CPSF1-203ENST00000527916 C3orf85A0A1B0GTC6 90 aa7.81□□□□□ -1.16
CPSF1-203ENST00000527916 I3L2K1 104 aa7.81□□□□□ -1.16
CPSF1-203ENST00000527916 CTDSPLO15194 276 aa7.81□□□□□ -1.16
CPSF1-203ENST00000527916 NUPL2O15504 423 aaKnown RBP7.81□□□□□ -1.16
CPSF1-203ENST00000527916 SPRY2O43597 315 aa7.81□□□□□ -1.16
CPSF1-203ENST00000527916 SCAF4O95104 1147 aaKnown RBP7.81□□□□□ -1.16
CPSF1-203ENST00000527916 RAB3DO95716 219 aa7.81□□□□□ -1.16
CPSF1-203ENST00000527916 APOC4P55056 127 aa7.81□□□□□ -1.16
CPSF1-203ENST00000527916 RELQ04864 619 aaPredicted RBP7.81□□□□□ -1.16
CPSF1-203ENST00000527916 Q56UQ5 140 aa7.81□□□□□ -1.16
CPSF1-203ENST00000527916 PVRIGQ6DKI7 326 aa7.81□□□□□ -1.16
CPSF1-203ENST00000527916 LAMTOR1Q6IAA8 161 aa7.81□□□□□ -1.16
CPSF1-203ENST00000527916 STEAP1BQ6NZ63 245 aa7.81□□□□□ -1.16
CPSF1-203ENST00000527916 LINC00336Q6ZUF6 198 aa7.81□□□□□ -1.16
CPSF1-203ENST00000527916 Q6ZWC4 215 aa7.81□□□□□ -1.16
CPSF1-203ENST00000527916 CCDC71LQ8N9Z2 235 aa7.81□□□□□ -1.16
CPSF1-203ENST00000527916 OR10C1Q96KK4 312 aa7.81□□□□□ -1.16
CPSF1-203ENST00000527916 TP53RKQ96S44 253 aa7.81□□□□□ -1.16
CPSF1-203ENST00000527916 CHRDL1Q9BU40 450 aa7.81□□□□□ -1.16
CPSF1-203ENST00000527916 A0A0B4J293 547 aa7.8□□□□□ -1.16
CPSF1-203ENST00000527916 CTDSP2O14595 271 aa7.8□□□□□ -1.16
CPSF1-203ENST00000527916 RGS5O15539 181 aa7.8□□□□□ -1.16
CPSF1-203ENST00000527916 MT-CO2P00403 227 aa7.8□□□□□ -1.16
CPSF1-203ENST00000527916 IGKV1-5P01602 117 aa7.8□□□□□ -1.16
CPSF1-203ENST00000527916 CTSDP07339 412 aaPredicted RBP7.8□□□□□ -1.16
CPSF1-203ENST00000527916 PI3P19957 117 aa7.8□□□□□ -1.16
CPSF1-203ENST00000527916 UCP1P25874 307 aa7.8□□□□□ -1.16
CPSF1-203ENST00000527916 TMBIM6P55061 237 aa7.8□□□□□ -1.16
CPSF1-203ENST00000527916 MEF2DQ14814 521 aa7.8□□□□□ -1.16
CPSF1-203ENST00000527916 SURF2Q15527 256 aaPredicted RBP7.8□□□□□ -1.16
CPSF1-203ENST00000527916 RNASE12Q5GAN4 147 aaKnown RBP7.8□□□□□ -1.16
CPSF1-203ENST00000527916 OR4D10Q8NGI6 311 aa7.8□□□□□ -1.16
CPSF1-203ENST00000527916 RAB2BQ8WUD1 216 aa7.8□□□□□ -1.16
CPSF1-203ENST00000527916 ZNF414Q96IQ9 312 aa7.8□□□□□ -1.16
CPSF1-203ENST00000527916 NXF2Q9GZY0 626 aaKnown RBP7.8□□□□□ -1.16
CPSF1-203ENST00000527916 COPZ2Q9P299 210 aa7.8□□□□□ -1.16
CPSF1-203ENST00000527916 IGHV3-21A0A0B4J1V1 117 aa7.79□□□□□ -1.16
CPSF1-203ENST00000527916 CORTO00230 105 aa7.79□□□□□ -1.16
CPSF1-203ENST00000527916 UBE2CO00762 179 aa7.79□□□□□ -1.16
CPSF1-203ENST00000527916 CDS2O95674 445 aa7.79□□□□□ -1.16
CPSF1-203ENST00000527916 SNCAP37840 140 aa7.79□□□□□ -1.16
CPSF1-203ENST00000527916 SPCS2Q15005 226 aa7.79□□□□□ -1.16
CPSF1-203ENST00000527916 FAM219AQ8IW50 185 aa7.79□□□□□ -1.16
CPSF1-203ENST00000527916 UBAC2Q8NBM4 344 aa7.79□□□□□ -1.16
CPSF1-203ENST00000527916 OR13C8Q8NGS7 320 aa7.79□□□□□ -1.16
CPSF1-203ENST00000527916 MARCH1Q8TCQ1 289 aa7.79□□□□□ -1.16
CPSF1-203ENST00000527916 DYNC2LI1Q8TCX1 351 aa7.79□□□□□ -1.16
CPSF1-203ENST00000527916 SMIM4Q8WVI0 70 aa7.79□□□□□ -1.16
CPSF1-203ENST00000527916 MISP3Q96FF7 219 aa7.79□□□□□ -1.16
CPSF1-203ENST00000527916 C20orf24Q9BUV8 137 aa7.79□□□□□ -1.16
CPSF1-203ENST00000527916 CCDC59Q9P031 241 aaKnown RBP7.79□□□□□ -1.16
CPSF1-203ENST00000527916 SMPXQ9UHP9 88 aa7.79□□□□□ -1.16
CPSF1-203ENST00000527916 SELENOKQ9Y6D0 94 aa7.79□□□□□ -1.16
CPSF1-203ENST00000527916 OR4C46A6NHA9 309 aa7.78□□□□□ -1.16
CPSF1-203ENST00000527916 ST8SIA3O43173 380 aa7.78□□□□□ -1.16
CPSF1-203ENST00000527916 GNG7O60262 68 aa7.78□□□□□ -1.16
CPSF1-203ENST00000527916 IFNA17P01571 189 aa7.78□□□□□ -1.16
CPSF1-203ENST00000527916 IFNA4P05014 189 aa7.78□□□□□ -1.16
CPSF1-203ENST00000527916 NPBWR1P48145 328 aa7.78□□□□□ -1.16
CPSF1-203ENST00000527916 AKR1C2P52895 323 aa7.78□□□□□ -1.16
CPSF1-203ENST00000527916 SUB1P53999 127 aaKnown RBP eCLIP7.78□□□□□ -1.16
CPSF1-203ENST00000527916 CMC4P56277 68 aaPredicted RBP7.78□□□□□ -1.16
CPSF1-203ENST00000527916 TCTAP57738 103 aa7.78□□□□□ -1.16
CPSF1-203ENST00000527916 IZUMO4Q1ZYL8 232 aa7.78□□□□□ -1.16
CPSF1-203ENST00000527916 TRIM16LQ309B1 348 aa7.78□□□□□ -1.16
CPSF1-203ENST00000527916 DEFB135Q30KP9 77 aa7.78□□□□□ -1.16
CPSF1-203ENST00000527916 SP6Q3SY56 376 aa7.78□□□□□ -1.16
CPSF1-203ENST00000527916 SCGB2B2Q4G0G5 96 aa7.78□□□□□ -1.16
CPSF1-203ENST00000527916 AARDQ4LEZ3 155 aa7.78□□□□□ -1.16
CPSF1-203ENST00000527916 CLVS1Q8IUQ0 354 aaPredicted RBP7.78□□□□□ -1.16
CPSF1-203ENST00000527916 TMEM116Q8NCL8 245 aa7.78□□□□□ -1.16
CPSF1-203ENST00000527916 DUSP18Q8NEJ0 188 aa7.78□□□□□ -1.16
CPSF1-203ENST00000527916 OR52E5Q8NH55 327 aa7.78□□□□□ -1.16
CPSF1-203ENST00000527916 GLYATL2Q8WU03 294 aa7.78□□□□□ -1.16
CPSF1-203ENST00000527916 RRNAD1Q96FB5 475 aaKnown RBP7.78□□□□□ -1.16
CPSF1-203ENST00000527916 RTBDNQ9BSG5 229 aaPredicted RBP7.78□□□□□ -1.16
CPSF1-203ENST00000527916 PDCD10Q9BUL8 212 aa7.78□□□□□ -1.16
CPSF1-203ENST00000527916 GPR132Q9UNW8 380 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms