RNA–Protein interactions for RNA: ENST00000527897.1

CAPN1-213, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 879 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-213ENST00000527897 MT-CO2P00403 227 aa11.69□□□□□ -0.54
CAPN1-213ENST00000527897 ETV6P41212 452 aa11.69□□□□□ -0.54
CAPN1-213ENST00000527897 MFAP4P55083 255 aa11.69□□□□□ -0.54
CAPN1-213ENST00000527897 HAGHQ16775 308 aa11.69□□□□□ -0.54
CAPN1-213ENST00000527897 SLC16A13Q7RTY0 426 aa11.69□□□□□ -0.54
CAPN1-213ENST00000527897 OR52B4Q8NGK2 314 aa11.69□□□□□ -0.54
CAPN1-213ENST00000527897 TMEM190Q8WZ59 177 aa11.69□□□□□ -0.54
CAPN1-213ENST00000527897 MARC2Q969Z3 335 aa11.69□□□□□ -0.54
CAPN1-213ENST00000527897 TM2D3Q9BRN9 247 aa11.69□□□□□ -0.54
CAPN1-213ENST00000527897 C5orf66Q9H5L9 145 aa11.69□□□□□ -0.54
CAPN1-213ENST00000527897 SRD5A3Q9H8P0 318 aa11.69□□□□□ -0.54
CAPN1-213ENST00000527897 MRPL27Q9P0M9 148 aaKnown RBP11.69□□□□□ -0.54
CAPN1-213ENST00000527897 F8W735 103 aaPredicted RBP11.68□□□□□ -0.54
CAPN1-213ENST00000527897 I3L2K1 104 aa11.68□□□□□ -0.54
CAPN1-213ENST00000527897 NDUFA4O00483 81 aa11.68□□□□□ -0.54
CAPN1-213ENST00000527897 B3GALNT1O75752 331 aa11.68□□□□□ -0.54
CAPN1-213ENST00000527897 P0C879 139 aa11.68□□□□□ -0.54
CAPN1-213ENST00000527897 ELLP55199 621 aaPredicted RBP11.68□□□□□ -0.54
CAPN1-213ENST00000527897 SURF2Q15527 256 aaPredicted RBP11.68□□□□□ -0.54
CAPN1-213ENST00000527897 PYDC2Q56P42 97 aa11.68□□□□□ -0.54
CAPN1-213ENST00000527897 LHFPL5Q8TAF8 219 aa11.68□□□□□ -0.54
CAPN1-213ENST00000527897 TMEM222Q9H0R3 208 aa11.68□□□□□ -0.54
CAPN1-213ENST00000527897 DAZ1Q9NQZ3 744 aaKnown RBP11.68□□□□□ -0.54
CAPN1-213ENST00000527897 SCP2D1Q9UJQ7 156 aa11.68□□□□□ -0.54
CAPN1-213ENST00000527897 GPR132Q9UNW8 380 aa11.68□□□□□ -0.54
CAPN1-213ENST00000527897 GNG7O60262 68 aa11.67□□□□□ -0.54
CAPN1-213ENST00000527897 ADMP35318 185 aa11.67□□□□□ -0.54
CAPN1-213ENST00000527897 TMEM268Q5VZI3 342 aa11.67□□□□□ -0.54
CAPN1-213ENST00000527897 ZNF114Q8NC26 417 aa11.67□□□□□ -0.54
CAPN1-213ENST00000527897 GLYATL2Q8WU03 294 aa11.67□□□□□ -0.54
CAPN1-213ENST00000527897 RBPMSQ93062 196 aaKnown RBP11.67□□□□□ -0.54
CAPN1-213ENST00000527897 SPATA25Q9BR10 227 aa11.67□□□□□ -0.54
CAPN1-213ENST00000527897 NXF2Q9GZY0 626 aaKnown RBP11.67□□□□□ -0.54
CAPN1-213ENST00000527897 RETNQ9HD89 108 aa11.67□□□□□ -0.54
CAPN1-213ENST00000527897 GAR1Q9NY12 217 aaKnown RBP11.67□□□□□ -0.54
CAPN1-213ENST00000527897 NBEAL2Q6ZNJ1 2754 aa11.67□□□□□ -0.54
CAPN1-213ENST00000527897 IGHV3-49A0A0A0MS15 119 aa11.66□□□□□ -0.54
CAPN1-213ENST00000527897 CRYM-AS1A6NIL9 109 aa11.66□□□□□ -0.54
CAPN1-213ENST00000527897 NXPH3O95157 252 aa11.66□□□□□ -0.54
CAPN1-213ENST00000527897 CDS2O95674 445 aa11.66□□□□□ -0.54
CAPN1-213ENST00000527897 CTSGP08311 255 aa11.66□□□□□ -0.54
CAPN1-213ENST00000527897 C8orf88P0DMB2 117 aa11.66□□□□□ -0.54
CAPN1-213ENST00000527897 AKR1C4P17516 323 aa11.66□□□□□ -0.54
CAPN1-213ENST00000527897 S100A5P33763 92 aa11.66□□□□□ -0.54
CAPN1-213ENST00000527897 SUB1P53999 127 aaKnown RBP eCLIP11.66□□□□□ -0.54
CAPN1-213ENST00000527897 DHODHQ02127 395 aa11.66□□□□□ -0.54
CAPN1-213ENST00000527897 RELQ04864 619 aaPredicted RBP11.66□□□□□ -0.54
CAPN1-213ENST00000527897 ANKRD55Q3KP44 614 aa11.66□□□□□ -0.54
CAPN1-213ENST00000527897 Q6ZRM9 215 aa11.66□□□□□ -0.54
CAPN1-213ENST00000527897 SELENOHQ8IZQ5 122 aaKnown RBP11.66□□□□□ -0.54
CAPN1-213ENST00000527897 ATP6V0BQ99437 205 aa11.66□□□□□ -0.54
CAPN1-213ENST00000527897 PRR13Q9NZ81 148 aa11.66□□□□□ -0.54
CAPN1-213ENST00000527897 KMT2CQ8NEZ4 4911 aaKnown RBP11.65□□□□□ -0.54
CAPN1-213ENST00000527897 RBMY1BA6NDE4 496 aaKnown RBP11.65□□□□□ -0.54
CAPN1-213ENST00000527897 RBMY1EA6NEQ0 496 aaKnown RBP11.65□□□□□ -0.54
CAPN1-213ENST00000527897 RBMY1DP0C7P1 496 aaKnown RBP11.65□□□□□ -0.54
CAPN1-213ENST00000527897 FAM219AQ8IW50 185 aa11.65□□□□□ -0.54
CAPN1-213ENST00000527897 DUSP18Q8NEJ0 188 aa11.65□□□□□ -0.54
CAPN1-213ENST00000527897 MUC7Q8TAX7 377 aa11.65□□□□□ -0.54
CAPN1-213ENST00000527897 GPR146Q96CH1 333 aa11.65□□□□□ -0.54
CAPN1-213ENST00000527897 SCGB3A2Q96PL1 93 aa11.65□□□□□ -0.54
CAPN1-213ENST00000527897 SOSTQ9BQB4 213 aa11.65□□□□□ -0.54
CAPN1-213ENST00000527897 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.65□□□□□ -0.54
CAPN1-213ENST00000527897 CACNG5Q9UF02 275 aa11.65□□□□□ -0.54
CAPN1-213ENST00000527897 KCNIP3Q9Y2W7 256 aa11.65□□□□□ -0.54
CAPN1-213ENST00000527897 TRAV25A0A0B4J276 109 aa11.64□□□□□ -0.55
CAPN1-213ENST00000527897 RNASE2P10153 161 aaKnown RBP11.64□□□□□ -0.55
CAPN1-213ENST00000527897 FAUP35544 74 aaKnown RBP11.64□□□□□ -0.55
CAPN1-213ENST00000527897 NPBWR1P48145 328 aa11.64□□□□□ -0.55
CAPN1-213ENST00000527897 LAMTOR1Q6IAA8 161 aa11.64□□□□□ -0.55
CAPN1-213ENST00000527897 TOMM5Q8N4H5 51 aa11.64□□□□□ -0.55
CAPN1-213ENST00000527897 TMEM230Q96A57 120 aa11.64□□□□□ -0.55
CAPN1-213ENST00000527897 TXN2Q99757 166 aa11.64□□□□□ -0.55
CAPN1-213ENST00000527897 FAM110AQ9BQ89 295 aa11.64□□□□□ -0.55
CAPN1-213ENST00000527897 UBQLN2Q9UHD9 624 aa11.64□□□□□ -0.55
CAPN1-213ENST00000527897 DNAH7Q8WXX0 4024 aa11.63□□□□□ -0.55
CAPN1-213ENST00000527897 IGKV3-7A0A075B6H7 116 aa11.63□□□□□ -0.55
CAPN1-213ENST00000527897 IGHV3OR16-13A0A075B7E8 117 aa11.63□□□□□ -0.55
CAPN1-213ENST00000527897 IGHV3-74A0A0B4J1X5 117 aa11.63□□□□□ -0.55
CAPN1-213ENST00000527897 C15orf62A8K5M9 175 aa11.63□□□□□ -0.55
CAPN1-213ENST00000527897 CEBPZOSA8MTT3 80 aa11.63□□□□□ -0.55
CAPN1-213ENST00000527897 C3orf84H3BNL1 204 aa11.63□□□□□ -0.55
CAPN1-213ENST00000527897 OPRK1P41145 380 aa11.63□□□□□ -0.55
CAPN1-213ENST00000527897 AP3S2P59780 193 aa11.63□□□□□ -0.55
CAPN1-213ENST00000527897 SPCS3P61009 180 aa11.63□□□□□ -0.55
CAPN1-213ENST00000527897 TMED4Q7Z7H5 227 aa11.63□□□□□ -0.55
CAPN1-213ENST00000527897 HEYLQ9NQ87 328 aaPredicted RBP11.63□□□□□ -0.55
CAPN1-213ENST00000527897 V9GYH0 126 aa11.63□□□□□ -0.55
CAPN1-213ENST00000527897 INS-IGF2F8WCM5 200 aa11.62□□□□□ -0.55
CAPN1-213ENST00000527897 K7EMT4 169 aa11.62□□□□□ -0.55
CAPN1-213ENST00000527897 CORTO00230 105 aa11.62□□□□□ -0.55
CAPN1-213ENST00000527897 TMEM187Q14656 261 aa11.62□□□□□ -0.55
CAPN1-213ENST00000527897 TMEM116Q8NCL8 245 aa11.62□□□□□ -0.55
CAPN1-213ENST00000527897 CITED4Q96RK1 184 aa11.62□□□□□ -0.55
CAPN1-213ENST00000527897 SPAG8Q99932 426 aaPredicted RBP11.62□□□□□ -0.55
CAPN1-213ENST00000527897 RBM38Q9H0Z9 239 aaKnown RBP11.62□□□□□ -0.55
CAPN1-213ENST00000527897 SMPXQ9UHP9 88 aa11.62□□□□□ -0.55
CAPN1-213ENST00000527897 TRAV14DV4A0A0A6YYC5 116 aa11.61□□□□□ -0.55
CAPN1-213ENST00000527897 IGHV7-4-1A0A0J9YVY3 117 aa11.61□□□□□ -0.55
CAPN1-213ENST00000527897 TSPAN4O14817 238 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms