RNA–Protein interactions for RNA: ENST00000527469.1

CAPN1-209, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 584 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-209ENST00000527469 LGALS9O00182 355 aa10.2□□□□□ -0.78
CAPN1-209ENST00000527469 CCR6P51684 374 aa10.2□□□□□ -0.78
CAPN1-209ENST00000527469 MFAP2P55001 183 aa10.2□□□□□ -0.78
CAPN1-209ENST00000527469 PRKDCP78527 4128 aaKnown RBP10.2□□□□□ -0.78
CAPN1-209ENST00000527469 SPSB3Q6PJ21 355 aa10.2□□□□□ -0.78
CAPN1-209ENST00000527469 GPR146Q96CH1 333 aa10.2□□□□□ -0.78
CAPN1-209ENST00000527469 ATP6V0BQ99437 205 aa10.2□□□□□ -0.78
CAPN1-209ENST00000527469 C7orf50Q9BRJ6 194 aaKnown RBP10.2□□□□□ -0.78
CAPN1-209ENST00000527469 SIGLEC8Q9NYZ4 499 aa10.2□□□□□ -0.78
CAPN1-209ENST00000527469 SHPKQ9UHJ6 478 aa10.2□□□□□ -0.78
CAPN1-209ENST00000527469 DNAH3Q8TD57 4116 aa10.19□□□□□ -0.78
CAPN1-209ENST00000527469 IGHV3-35A0A0C4DH35 117 aa10.19□□□□□ -0.78
CAPN1-209ENST00000527469 K7EIM0 57 aa10.19□□□□□ -0.78
CAPN1-209ENST00000527469 CORTO00230 105 aa10.19□□□□□ -0.78
CAPN1-209ENST00000527469 NUPL2O15504 423 aaKnown RBP10.19□□□□□ -0.78
CAPN1-209ENST00000527469 MT-CO2P00403 227 aa10.19□□□□□ -0.78
CAPN1-209ENST00000527469 IL7P13232 177 aa10.19□□□□□ -0.78
CAPN1-209ENST00000527469 MFAP4P55083 255 aa10.19□□□□□ -0.78
CAPN1-209ENST00000527469 SUPT4H1P63272 117 aaKnown RBP10.19□□□□□ -0.78
CAPN1-209ENST00000527469 IL34Q6ZMJ4 242 aa10.19□□□□□ -0.78
CAPN1-209ENST00000527469 Q6ZRM9 215 aa10.19□□□□□ -0.78
CAPN1-209ENST00000527469 LYZL2Q7Z4W2 148 aa10.19□□□□□ -0.78
CAPN1-209ENST00000527469 GTSCR1Q86UQ5 136 aa10.19□□□□□ -0.78
CAPN1-209ENST00000527469 OR52E5Q8NH55 327 aa10.19□□□□□ -0.78
CAPN1-209ENST00000527469 OR1S1Q8NH92 325 aa10.19□□□□□ -0.78
CAPN1-209ENST00000527469 HIPK2Q9H2X6 1198 aa10.19□□□□□ -0.78
CAPN1-209ENST00000527469 UFC1Q9Y3C8 167 aa10.19□□□□□ -0.78
CAPN1-209ENST00000527469 SMAD5-AS1Q9Y6J3 95 aa10.19□□□□□ -0.78
CAPN1-209ENST00000527469 C2orf70A6NJV1 201 aa10.18□□□□□ -0.78
CAPN1-209ENST00000527469 INS-IGF2F8WCM5 200 aa10.18□□□□□ -0.78
CAPN1-209ENST00000527469 GNG7O60262 68 aa10.18□□□□□ -0.78
CAPN1-209ENST00000527469 SCGB2A1O75556 95 aa10.18□□□□□ -0.78
CAPN1-209ENST00000527469 NXPH3O95157 252 aa10.18□□□□□ -0.78
CAPN1-209ENST00000527469 FOLR2P14207 255 aa10.18□□□□□ -0.78
CAPN1-209ENST00000527469 NPBWR1P48145 328 aa10.18□□□□□ -0.78
CAPN1-209ENST00000527469 UBE2MP61081 183 aaKnown RBP10.18□□□□□ -0.78
CAPN1-209ENST00000527469 RELQ04864 619 aaPredicted RBP10.18□□□□□ -0.78
CAPN1-209ENST00000527469 SMCO1Q147U7 214 aa10.18□□□□□ -0.78
CAPN1-209ENST00000527469 DUSP18Q8NEJ0 188 aa10.18□□□□□ -0.78
CAPN1-209ENST00000527469 OR2K2Q8NGT1 345 aa10.18□□□□□ -0.78
CAPN1-209ENST00000527469 TXN2Q99757 166 aa10.18□□□□□ -0.78
CAPN1-209ENST00000527469 TECRQ9NZ01 308 aaKnown RBP10.18□□□□□ -0.78
CAPN1-209ENST00000527469 DUXBA0A1W2PPF3 345 aa10.17□□□□□ -0.78
CAPN1-209ENST00000527469 A8MWP6 167 aa10.17□□□□□ -0.78
CAPN1-209ENST00000527469 YIF1AO95070 293 aa10.17□□□□□ -0.78
CAPN1-209ENST00000527469 NDUFB6O95139 128 aa10.17□□□□□ -0.78
CAPN1-209ENST00000527469 IGHV3-48P01763 117 aa10.17□□□□□ -0.78
CAPN1-209ENST00000527469 OPRK1P41145 380 aa10.17□□□□□ -0.78
CAPN1-209ENST00000527469 HTR2BP41595 481 aa10.17□□□□□ -0.78
CAPN1-209ENST00000527469 PPP1R1AQ13522 171 aa10.17□□□□□ -0.78
CAPN1-209ENST00000527469 GUCA2BQ16661 112 aa10.17□□□□□ -0.78
CAPN1-209ENST00000527469 CNPY1Q3B7I2 92 aa10.17□□□□□ -0.78
CAPN1-209ENST00000527469 NOXA1Q86UR1 476 aa10.17□□□□□ -0.78
CAPN1-209ENST00000527469 S100ZQ8WXG8 99 aa10.17□□□□□ -0.78
CAPN1-209ENST00000527469 MARC2Q969Z3 335 aa10.17□□□□□ -0.78
CAPN1-209ENST00000527469 B9D2Q9BPU9 175 aa10.17□□□□□ -0.78
CAPN1-209ENST00000527469 C20orf24Q9BUV8 137 aa10.17□□□□□ -0.78
CAPN1-209ENST00000527469 A0A1B0GU03 582 aa10.16□□□□□ -0.78
CAPN1-209ENST00000527469 I3L2K1 104 aa10.16□□□□□ -0.78
CAPN1-209ENST00000527469 NDUFA4O00483 81 aa10.16□□□□□ -0.78
CAPN1-209ENST00000527469 SFT2D2O95562 160 aa10.16□□□□□ -0.78
CAPN1-209ENST00000527469 RNASE2P10153 161 aaKnown RBP10.16□□□□□ -0.78
CAPN1-209ENST00000527469 CBLN1P23435 193 aa10.16□□□□□ -0.78
CAPN1-209ENST00000527469 CD300EQ496F6 205 aaPredicted RBP10.16□□□□□ -0.78
CAPN1-209ENST00000527469 AARDQ4LEZ3 155 aa10.16□□□□□ -0.78
CAPN1-209ENST00000527469 C4orf46Q504U0 113 aa10.16□□□□□ -0.78
CAPN1-209ENST00000527469 TM4SF20Q53R12 229 aa10.16□□□□□ -0.78
CAPN1-209ENST00000527469 NMSQ5H8A3 153 aa10.16□□□□□ -0.78
CAPN1-209ENST00000527469 LINC00299Q6ZSB3 139 aa10.16□□□□□ -0.78
CAPN1-209ENST00000527469 UXS1Q8NBZ7 420 aa10.16□□□□□ -0.78
CAPN1-209ENST00000527469 SLC24A4Q8NFF2 622 aa10.16□□□□□ -0.78
CAPN1-209ENST00000527469 CACNG8Q8WXS5 425 aa10.16□□□□□ -0.78
CAPN1-209ENST00000527469 SDHCQ99643 169 aaPredicted RBP10.16□□□□□ -0.78
CAPN1-209ENST00000527469 CHRDL1Q9BU40 450 aa10.16□□□□□ -0.78
CAPN1-209ENST00000527469 LSM4Q9Y4Z0 139 aaKnown RBP10.16□□□□□ -0.78
CAPN1-209ENST00000527469 RPS10-NUDT3A0A1W2PQS6 291 aa10.15□□□□□ -0.78
CAPN1-209ENST00000527469 TMEM213A2RRL7 107 aa10.15□□□□□ -0.78
CAPN1-209ENST00000527469 A6NHS1 94 aa10.15□□□□□ -0.78
CAPN1-209ENST00000527469 IFNA10P01566 189 aa10.15□□□□□ -0.78
CAPN1-209ENST00000527469 ELLP55199 621 aaPredicted RBP10.15□□□□□ -0.78
CAPN1-209ENST00000527469 TNFRSF9Q07011 255 aa10.15□□□□□ -0.78
CAPN1-209ENST00000527469 ANKRD55Q3KP44 614 aa10.15□□□□□ -0.78
CAPN1-209ENST00000527469 UNQ9165/PRO28630Q6UXU0 137 aa10.15□□□□□ -0.78
CAPN1-209ENST00000527469 COQ8AQ8NI60 647 aa10.15□□□□□ -0.78
CAPN1-209ENST00000527469 TMEM190Q8WZ59 177 aa10.15□□□□□ -0.78
CAPN1-209ENST00000527469 CCDC32Q9BV29 185 aa10.15□□□□□ -0.78
CAPN1-209ENST00000527469 ZNF436Q9C0F3 470 aaPredicted RBP10.15□□□□□ -0.78
CAPN1-209ENST00000527469 DAZ1Q9NQZ3 744 aaKnown RBP10.15□□□□□ -0.78
CAPN1-209ENST00000527469 MRPL27Q9P0M9 148 aaKnown RBP10.15□□□□□ -0.78
CAPN1-209ENST00000527469 TMED3Q9Y3Q3 217 aa10.15□□□□□ -0.78
CAPN1-209ENST00000527469 LYRM1O43325 122 aa10.14□□□□□ -0.79
CAPN1-209ENST00000527469 CTSGP08311 255 aa10.14□□□□□ -0.79
CAPN1-209ENST00000527469 HOXB5P09067 269 aa10.14□□□□□ -0.79
CAPN1-209ENST00000527469 NPY1RP25929 384 aa10.14□□□□□ -0.79
CAPN1-209ENST00000527469 FCGR2BP31994 310 aaPredicted RBP10.14□□□□□ -0.79
CAPN1-209ENST00000527469 DEFB114Q30KQ6 69 aa10.14□□□□□ -0.79
CAPN1-209ENST00000527469 RBPMS2Q6ZRY4 209 aaKnown RBP10.14□□□□□ -0.79
CAPN1-209ENST00000527469 LRTM2Q8N967 370 aa10.14□□□□□ -0.79
CAPN1-209ENST00000527469 DTD1Q8TEA8 209 aa10.14□□□□□ -0.79
CAPN1-209ENST00000527469 RBKSQ9H477 322 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms