RNA–Protein interactions for RNA: ENST00000525990.1

SSBP3-210, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 2

Gene SSBP3, Length 701 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-210ENST00000525990 Q6ZRM9 215 aa8.94□□□□□ -0.98
SSBP3-210ENST00000525990 TMEM229BQ8NBD8 167 aa8.94□□□□□ -0.98
SSBP3-210ENST00000525990 LHFPL5Q8TAF8 219 aa8.94□□□□□ -0.98
SSBP3-210ENST00000525990 MRPS26Q9BYN8 205 aaKnown RBP8.94□□□□□ -0.98
SSBP3-210ENST00000525990 MRPL36Q9P0J6 103 aaKnown RBP8.94□□□□□ -0.98
SSBP3-210ENST00000525990 SMPXQ9UHP9 88 aa8.94□□□□□ -0.98
SSBP3-210ENST00000525990 HYDINQ4G0P3 5121 aa8.93□□□□□ -0.98
SSBP3-210ENST00000525990 IGHV7-4-1A0A0J9YVY3 117 aa8.93□□□□□ -0.98
SSBP3-210ENST00000525990 C15orf62A8K5M9 175 aa8.93□□□□□ -0.98
SSBP3-210ENST00000525990 K7EMT4 169 aa8.93□□□□□ -0.98
SSBP3-210ENST00000525990 CHEK1O14757 476 aa8.93□□□□□ -0.98
SSBP3-210ENST00000525990 YIF1AO95070 293 aa8.93□□□□□ -0.98
SSBP3-210ENST00000525990 APOHP02749 345 aaPredicted RBP8.93□□□□□ -0.98
SSBP3-210ENST00000525990 RPL35AP18077 110 aaKnown RBP8.93□□□□□ -0.98
SSBP3-210ENST00000525990 ETV6P41212 452 aa8.93□□□□□ -0.98
SSBP3-210ENST00000525990 MFAP4P55083 255 aa8.93□□□□□ -0.98
SSBP3-210ENST00000525990 DEFB135Q30KP9 77 aa8.93□□□□□ -0.98
SSBP3-210ENST00000525990 ANKRD55Q3KP44 614 aa8.93□□□□□ -0.98
SSBP3-210ENST00000525990 STEAP1BQ6NZ63 245 aa8.93□□□□□ -0.98
SSBP3-210ENST00000525990 GPR141Q7Z602 305 aa8.93□□□□□ -0.98
SSBP3-210ENST00000525990 CLVS1Q8IUQ0 354 aaPredicted RBP8.93□□□□□ -0.98
SSBP3-210ENST00000525990 APRG1Q8IVJ8 170 aa8.93□□□□□ -0.98
SSBP3-210ENST00000525990 LILRB2Q8N423 598 aa8.93□□□□□ -0.98
SSBP3-210ENST00000525990 TERB2Q8NHR7 220 aa8.93□□□□□ -0.98
SSBP3-210ENST00000525990 ZNF486Q96H40 463 aaPredicted RBP8.93□□□□□ -0.98
SSBP3-210ENST00000525990 ATP6V0BQ99437 205 aa8.93□□□□□ -0.98
SSBP3-210ENST00000525990 RHPN1-AS1Q9BWJ2 59 aa8.93□□□□□ -0.98
SSBP3-210ENST00000525990 NXF2Q9GZY0 626 aaKnown RBP8.93□□□□□ -0.98
SSBP3-210ENST00000525990 IGHV3-66A0A0C4DH42 116 aa8.92□□□□□ -0.98
SSBP3-210ENST00000525990 GABARAPH6UMI1 98 aa8.92□□□□□ -0.98
SSBP3-210ENST00000525990 NUPL2O15504 423 aaKnown RBP8.92□□□□□ -0.98
SSBP3-210ENST00000525990 GNG7O60262 68 aa8.92□□□□□ -0.98
SSBP3-210ENST00000525990 OR5AC1P0C628 307 aa8.92□□□□□ -0.98
SSBP3-210ENST00000525990 RNASE2P10153 161 aaKnown RBP8.92□□□□□ -0.98
SSBP3-210ENST00000525990 TBPP20226 339 aa8.92□□□□□ -0.98
SSBP3-210ENST00000525990 UCP1P25874 307 aa8.92□□□□□ -0.98
SSBP3-210ENST00000525990 TAS2R19P59542 299 aa8.92□□□□□ -0.98
SSBP3-210ENST00000525990 MLANAQ16655 118 aa8.92□□□□□ -0.98
SSBP3-210ENST00000525990 TRIM16LQ309B1 348 aa8.92□□□□□ -0.98
SSBP3-210ENST00000525990 GBGT1Q8N5D6 347 aa8.92□□□□□ -0.98
SSBP3-210ENST00000525990 SLC35G3Q8N808 338 aa8.92□□□□□ -0.98
SSBP3-210ENST00000525990 TMEM116Q8NCL8 245 aa8.92□□□□□ -0.98
SSBP3-210ENST00000525990 DYNC2LI1Q8TCX1 351 aa8.92□□□□□ -0.98
SSBP3-210ENST00000525990 OR10C1Q96KK4 312 aa8.92□□□□□ -0.98
SSBP3-210ENST00000525990 RTBDNQ9BSG5 229 aaPredicted RBP8.92□□□□□ -0.98
SSBP3-210ENST00000525990 FNDC4Q9H6D8 234 aaPredicted RBP8.92□□□□□ -0.98
SSBP3-210ENST00000525990 PRR13Q9NZ81 148 aa8.92□□□□□ -0.98
SSBP3-210ENST00000525990 COPZ2Q9P299 210 aa8.92□□□□□ -0.98
SSBP3-210ENST00000525990 A0A0J9YWU9 116 aa8.91□□□□□ -0.98
SSBP3-210ENST00000525990 A0A1B0GU03 582 aa8.91□□□□□ -0.98
SSBP3-210ENST00000525990 NXPH3O95157 252 aa8.91□□□□□ -0.98
SSBP3-210ENST00000525990 IFNA17P01571 189 aa8.91□□□□□ -0.98
SSBP3-210ENST00000525990 FCGR2BP31994 310 aaPredicted RBP8.91□□□□□ -0.98
SSBP3-210ENST00000525990 HOXA1P49639 335 aaPredicted RBP8.91□□□□□ -0.98
SSBP3-210ENST00000525990 ERHP84090 104 aaKnown RBP8.91□□□□□ -0.98
SSBP3-210ENST00000525990 RELQ04864 619 aaPredicted RBP8.91□□□□□ -0.98
SSBP3-210ENST00000525990 LAMTOR1Q6IAA8 161 aa8.91□□□□□ -0.98
SSBP3-210ENST00000525990 TOMM20LQ6UXN7 152 aa8.91□□□□□ -0.98
SSBP3-210ENST00000525990 OR4C16Q8NGL9 310 aa8.91□□□□□ -0.98
SSBP3-210ENST00000525990 SMIM4Q8WVI0 70 aa8.91□□□□□ -0.98
SSBP3-210ENST00000525990 ST8SIA2Q92186 375 aa8.91□□□□□ -0.98
SSBP3-210ENST00000525990 ZFAND3Q9H8U3 227 aa8.91□□□□□ -0.98
SSBP3-210ENST00000525990 AGRNO00468 2067 aa8.9□□□□□ -0.98
SSBP3-210ENST00000525990 OR4C46A6NHA9 309 aa8.9□□□□□ -0.98
SSBP3-210ENST00000525990 PMS2P11Q13670 270 aa8.9□□□□□ -0.98
SSBP3-210ENST00000525990 IL18Q14116 193 aa8.9□□□□□ -0.98
SSBP3-210ENST00000525990 MEF2DQ14814 521 aa8.9□□□□□ -0.98
SSBP3-210ENST00000525990 FAM90A2PQ658T7 463 aa8.9□□□□□ -0.98
SSBP3-210ENST00000525990 PVRIGQ6DKI7 326 aa8.9□□□□□ -0.98
SSBP3-210ENST00000525990 FAM24BQ8N5W8 94 aa8.9□□□□□ -0.98
SSBP3-210ENST00000525990 CCDC71LQ8N9Z2 235 aa8.9□□□□□ -0.98
SSBP3-210ENST00000525990 IL17DQ8TAD2 202 aa8.9□□□□□ -0.98
SSBP3-210ENST00000525990 ZFAND1Q8TCF1 268 aa8.9□□□□□ -0.98
SSBP3-210ENST00000525990 GLYATL2Q8WU03 294 aa8.9□□□□□ -0.98
SSBP3-210ENST00000525990 TXN2Q99757 166 aa8.9□□□□□ -0.98
SSBP3-210ENST00000525990 TMEM222Q9H0R3 208 aa8.9□□□□□ -0.98
SSBP3-210ENST00000525990 PUS1Q9Y606 427 aaKnown RBP eCLIP8.9□□□□□ -0.98
SSBP3-210ENST00000525990 DNAH1Q9P2D7 4330 aa8.89□□□□□ -0.99
SSBP3-210ENST00000525990 TRAV14DV4A0A0A6YYC5 116 aa8.89□□□□□ -0.99
SSBP3-210ENST00000525990 INS-IGF2F8WCM5 200 aa8.89□□□□□ -0.99
SSBP3-210ENST00000525990 SPRY2O43597 315 aa8.89□□□□□ -0.99
SSBP3-210ENST00000525990 TMEM50AO95807 157 aa8.89□□□□□ -0.99
SSBP3-210ENST00000525990 SNCAP37840 140 aa8.89□□□□□ -0.99
SSBP3-210ENST00000525990 TCF24Q7RTU0 167 aa8.89□□□□□ -0.99
SSBP3-210ENST00000525990 LYG2Q86SG7 212 aa8.89□□□□□ -0.99
SSBP3-210ENST00000525990 WFDC3Q8IUB2 231 aa8.89□□□□□ -0.99
SSBP3-210ENST00000525990 SELENOHQ8IZQ5 122 aaKnown RBP8.89□□□□□ -0.99
SSBP3-210ENST00000525990 OR51S1Q8NGJ8 323 aa8.89□□□□□ -0.99
SSBP3-210ENST00000525990 RNASE11Q8TAA1 199 aaKnown RBP8.89□□□□□ -0.99
SSBP3-210ENST00000525990 TMEM230Q96A57 120 aa8.89□□□□□ -0.99
SSBP3-210ENST00000525990 DIRAS2Q96HU8 199 aa8.89□□□□□ -0.99
SSBP3-210ENST00000525990 NAA60Q9H7X0 242 aa8.89□□□□□ -0.99
SSBP3-210ENST00000525990 MAP6D1Q9H9H5 199 aa8.89□□□□□ -0.99
SSBP3-210ENST00000525990 TEX13DA0A0J9YY54 714 aaPredicted RBP8.88□□□□□ -0.99
SSBP3-210ENST00000525990 DFFBO76075 338 aa8.88□□□□□ -0.99
SSBP3-210ENST00000525990 CDS2O95674 445 aa8.88□□□□□ -0.99
SSBP3-210ENST00000525990 AKAIN1P0CW23 69 aa8.88□□□□□ -0.99
SSBP3-210ENST00000525990 APOC4P55056 127 aa8.88□□□□□ -0.99
SSBP3-210ENST00000525990 BSXQ3C1V8 233 aa8.88□□□□□ -0.99
SSBP3-210ENST00000525990 TMEM268Q5VZI3 342 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 80.6 ms