RNA–Protein interactions for RNA: ENST00000525469.1

CD44-218, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 705 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-218ENST00000525469 HEATR1Q9H583 2144 aaKnown RBP4.16□□□□□ -1.74
CD44-218ENST00000525469 TRAV26-1A0A087WT03 109 aa4.16□□□□□ -1.74
CD44-218ENST00000525469 CTXND1A0A1B0GTU2 59 aa4.16□□□□□ -1.74
CD44-218ENST00000525469 IGSF23A1L1A6 192 aa4.16□□□□□ -1.74
CD44-218ENST00000525469 ZFP92A6NM28 416 aa4.16□□□□□ -1.74
CD44-218ENST00000525469 TMEM14DPA8MWL7 114 aa4.16□□□□□ -1.74
CD44-218ENST00000525469 H0YJW9 148 aa4.16□□□□□ -1.74
CD44-218ENST00000525469 C16orf97H3BN30 126 aa4.16□□□□□ -1.74
CD44-218ENST00000525469 PLPP1O14494 284 aa4.16□□□□□ -1.74
CD44-218ENST00000525469 GNG7O60262 68 aa4.16□□□□□ -1.74
CD44-218ENST00000525469 GYPAP02724 150 aa4.16□□□□□ -1.74
CD44-218ENST00000525469 ZNF728P0DKX0 622 aa4.16□□□□□ -1.74
CD44-218ENST00000525469 SMIM10L1P0DMW3 83 aa4.16□□□□□ -1.74
CD44-218ENST00000525469 PSG2P11465 335 aa4.16□□□□□ -1.74
CD44-218ENST00000525469 FABP2P12104 132 aa4.16□□□□□ -1.74
CD44-218ENST00000525469 SLC25A16P16260 332 aa4.16□□□□□ -1.74
CD44-218ENST00000525469 CRYBB3P26998 211 aa4.16□□□□□ -1.74
CD44-218ENST00000525469 CDKN1AP38936 164 aa4.16□□□□□ -1.74
CD44-218ENST00000525469 SSR2P43308 183 aa4.16□□□□□ -1.74
CD44-218ENST00000525469 GNB2P62879 340 aa4.16□□□□□ -1.74
CD44-218ENST00000525469 PRDX1Q06830 199 aaKnown RBP4.16□□□□□ -1.74
CD44-218ENST00000525469 LOXL1Q08397 574 aaPredicted RBP4.16□□□□□ -1.74
CD44-218ENST00000525469 FOXF2Q12947 444 aa4.16□□□□□ -1.74
CD44-218ENST00000525469 CCSMST1Q4G0I0 132 aa4.16□□□□□ -1.74
CD44-218ENST00000525469 FAM78BQ5VT40 261 aa4.16□□□□□ -1.74
CD44-218ENST00000525469 FAM219BQ5XKK7 198 aa4.16□□□□□ -1.74
CD44-218ENST00000525469 PLCXD3Q63HM9 321 aa4.16□□□□□ -1.74
CD44-218ENST00000525469 OR4C11Q6IEV9 310 aa4.16□□□□□ -1.74
CD44-218ENST00000525469 UFSP1Q6NVU6 142 aa4.16□□□□□ -1.74
CD44-218ENST00000525469 LINC00346Q8IVM7 164 aa4.16□□□□□ -1.74
CD44-218ENST00000525469 OR8I2Q8N0Y5 310 aa4.16□□□□□ -1.74
CD44-218ENST00000525469 CDRT4Q8N9R6 151 aa4.16□□□□□ -1.74
CD44-218ENST00000525469 C9orf106Q8NAJ2 232 aa4.16□□□□□ -1.74
CD44-218ENST00000525469 NFAM1Q8NET5 270 aaPredicted RBP4.16□□□□□ -1.74
CD44-218ENST00000525469 OR10V1Q8NGI7 309 aa4.16□□□□□ -1.74
CD44-218ENST00000525469 OR5C1Q8NGR4 320 aa4.16□□□□□ -1.74
CD44-218ENST00000525469 OR1N2Q8NGR9 330 aa4.16□□□□□ -1.74
CD44-218ENST00000525469 OR2K2Q8NGT1 345 aa4.16□□□□□ -1.74
CD44-218ENST00000525469 VSTM2AQ8TAG5 236 aa4.16□□□□□ -1.74
CD44-218ENST00000525469 IGFBPL1Q8WX77 278 aa4.16□□□□□ -1.74
CD44-218ENST00000525469 TMEM190Q8WZ59 177 aa4.16□□□□□ -1.74
CD44-218ENST00000525469 NEUROG1Q92886 237 aa4.16□□□□□ -1.74
CD44-218ENST00000525469 C10orf35Q96D05 121 aa4.16□□□□□ -1.74
CD44-218ENST00000525469 SMIM10Q96HG1 83 aa4.16□□□□□ -1.74
CD44-218ENST00000525469 Q96M85 177 aa4.16□□□□□ -1.74
CD44-218ENST00000525469 GPR82Q96P67 336 aa4.16□□□□□ -1.74
CD44-218ENST00000525469 RASL10BQ96S79 203 aa4.16□□□□□ -1.74
CD44-218ENST00000525469 ABHD14AQ9BUJ0 271 aa4.16□□□□□ -1.74
CD44-218ENST00000525469 TPPP3Q9BW30 176 aa4.16□□□□□ -1.74
CD44-218ENST00000525469 TMEM59Q9BXS4 323 aa4.16□□□□□ -1.74
CD44-218ENST00000525469 COMMD5Q9GZQ3 224 aa4.16□□□□□ -1.74
CD44-218ENST00000525469 RAB1BQ9H0U4 201 aa4.16□□□□□ -1.74
CD44-218ENST00000525469 ZNF286AQ9HBT8 521 aa4.16□□□□□ -1.74
CD44-218ENST00000525469 KCNIP2Q9NS61 270 aa4.16□□□□□ -1.74
CD44-218ENST00000525469 LANCL2Q9NS86 450 aa4.16□□□□□ -1.74
CD44-218ENST00000525469 SLC39A9Q9NUM3 307 aa4.16□□□□□ -1.74
CD44-218ENST00000525469 TAC3Q9UHF0 121 aa4.16□□□□□ -1.74
CD44-218ENST00000525469 ZNF391Q9UJN7 358 aa4.16□□□□□ -1.74
CD44-218ENST00000525469 POLR1DQ9Y2S0 133 aa4.16□□□□□ -1.74
CD44-218ENST00000525469 KLHDC2Q9Y2U9 406 aa4.16□□□□□ -1.74
CD44-218ENST00000525469 IER3IP1Q9Y5U9 82 aa4.16□□□□□ -1.74
CD44-218ENST00000525469 ARL2-SNX15V9GYD0 113 aa4.16□□□□□ -1.74
CD44-218ENST00000525469 IGHV4-30-2A0A087WSY4 118 aa4.15□□□□□ -1.75
CD44-218ENST00000525469 A0A0A6YYD5 115 aa4.15□□□□□ -1.75
CD44-218ENST00000525469 TRBV7-9A0A0J9YWB2 115 aa4.15□□□□□ -1.75
CD44-218ENST00000525469 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP4.15□□□□□ -1.75
CD44-218ENST00000525469 A0A1W2PPV9 198 aa4.15□□□□□ -1.75
CD44-218ENST00000525469 TMEM89A2RUT3 159 aa4.15□□□□□ -1.75
CD44-218ENST00000525469 TMEM262E9PQX1 116 aa4.15□□□□□ -1.75
CD44-218ENST00000525469 OVOL3O00110 214 aa4.15□□□□□ -1.75
CD44-218ENST00000525469 SDCBPO00560 298 aaPredicted RBP4.15□□□□□ -1.75
CD44-218ENST00000525469 CRXO43186 299 aaPredicted RBP4.15□□□□□ -1.75
CD44-218ENST00000525469 MLNRO43193 412 aa4.15□□□□□ -1.75
CD44-218ENST00000525469 ANGPTL7O43827 346 aa4.15□□□□□ -1.75
CD44-218ENST00000525469 SERF1AO75920 110 aa4.15□□□□□ -1.75
CD44-218ENST00000525469 C1orf105O95561 183 aa4.15□□□□□ -1.75
CD44-218ENST00000525469 CGAP01215 116 aa4.15□□□□□ -1.75
CD44-218ENST00000525469 IGHV4-39P01824 125 aa4.15□□□□□ -1.75
CD44-218ENST00000525469 RFPL3SP0C7P2 107 aa4.15□□□□□ -1.75
CD44-218ENST00000525469 PPIAL4GP0DN37 164 aa4.15□□□□□ -1.75
CD44-218ENST00000525469 IGHV4-31P0DP07 118 aa4.15□□□□□ -1.75
CD44-218ENST00000525469 CCL3P10147 92 aa4.15□□□□□ -1.75
CD44-218ENST00000525469 ZNF93P35789 620 aaPredicted RBP4.15□□□□□ -1.75
CD44-218ENST00000525469 SNU13P55769 128 aaKnown RBP4.15□□□□□ -1.75
CD44-218ENST00000525469 RPS15AP62244 130 aaKnown RBP4.15□□□□□ -1.75
CD44-218ENST00000525469 UBE2G1P62253 170 aa4.15□□□□□ -1.75
CD44-218ENST00000525469 PSG9Q00887 426 aa4.15□□□□□ -1.75
CD44-218ENST00000525469 AESQ08117 197 aa4.15□□□□□ -1.75
CD44-218ENST00000525469 GABRA6Q16445 453 aa4.15□□□□□ -1.75
CD44-218ENST00000525469 RPEL1Q2QD12 228 aa4.15□□□□□ -1.75
CD44-218ENST00000525469 PRICKLE4Q2TBC4 344 aa4.15□□□□□ -1.75
CD44-218ENST00000525469 C5orf47Q569G3 176 aa4.15□□□□□ -1.75
CD44-218ENST00000525469 BVES-AS1Q5T3Y7 98 aa4.15□□□□□ -1.75
CD44-218ENST00000525469 LINC01590Q5TEZ4 76 aa4.15□□□□□ -1.75
CD44-218ENST00000525469 C1orf140Q5VVS0 124 aa4.15□□□□□ -1.75
CD44-218ENST00000525469 MFSD12Q6NUT3 480 aa4.15□□□□□ -1.75
CD44-218ENST00000525469 SLC48A1Q6P1K1 146 aa4.15□□□□□ -1.75
CD44-218ENST00000525469 CBLN3Q6UW01 205 aa4.15□□□□□ -1.75
CD44-218ENST00000525469 RTN4RL2Q86UN3 420 aa4.15□□□□□ -1.75
CD44-218ENST00000525469 FAM90A1Q86YD7 464 aa4.15□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms