RNA–Protein interactions for RNA: ENST00000524955.1

CHMP4A-202, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 2

Gene CHMP4A, Length 268 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-202ENST00000524955 FAM223BA6NKX1 122 aa3.53□□□□□ -1.84
CHMP4A-202ENST00000524955 F8W735 103 aaPredicted RBP3.53□□□□□ -1.84
CHMP4A-202ENST00000524955 H3BUA1 57 aa3.53□□□□□ -1.84
CHMP4A-202ENST00000524955 I3L2K1 104 aa3.53□□□□□ -1.84
CHMP4A-202ENST00000524955 SSNA1O43805 119 aa3.53□□□□□ -1.84
CHMP4A-202ENST00000524955 SSSCA1O60232 199 aa3.53□□□□□ -1.84
CHMP4A-202ENST00000524955 PITX3O75364 302 aa3.53□□□□□ -1.84
CHMP4A-202ENST00000524955 CCNKO75909 580 aa3.53□□□□□ -1.84
CHMP4A-202ENST00000524955 TMEM50AO95807 157 aa3.53□□□□□ -1.84
CHMP4A-202ENST00000524955 DHFRP00374 187 aa3.53□□□□□ -1.84
CHMP4A-202ENST00000524955 IFNA21P01568 189 aa3.53□□□□□ -1.84
CHMP4A-202ENST00000524955 MBPP02686 304 aaPredicted RBP3.53□□□□□ -1.84
CHMP4A-202ENST00000524955 HSPB1P04792 205 aaKnown RBP3.53□□□□□ -1.84
CHMP4A-202ENST00000524955 IL5P05113 134 aa3.53□□□□□ -1.84
CHMP4A-202ENST00000524955 ARL3P36405 182 aa3.53□□□□□ -1.84
CHMP4A-202ENST00000524955 MYCNOSP40205 109 aa3.53□□□□□ -1.84
CHMP4A-202ENST00000524955 OPRK1P41145 380 aa3.53□□□□□ -1.84
CHMP4A-202ENST00000524955 S100A10P60903 97 aa3.53□□□□□ -1.84
CHMP4A-202ENST00000524955 DCTN2Q13561 401 aaKnown RBP3.53□□□□□ -1.84
CHMP4A-202ENST00000524955 TATDN3Q17R31 274 aa3.53□□□□□ -1.84
CHMP4A-202ENST00000524955 RPEL1Q2QD12 228 aa3.53□□□□□ -1.84
CHMP4A-202ENST00000524955 LRRC37A5PQ49AS3 106 aa3.53□□□□□ -1.84
CHMP4A-202ENST00000524955 SPANXN5Q5MJ07 72 aa3.53□□□□□ -1.84
CHMP4A-202ENST00000524955 ACSM6Q6P461 480 aa3.53□□□□□ -1.84
CHMP4A-202ENST00000524955 GSG1LQ6UXU4 331 aa3.53□□□□□ -1.84
CHMP4A-202ENST00000524955 FAM223AQ8IWN6 122 aa3.53□□□□□ -1.84
CHMP4A-202ENST00000524955 LRTM2Q8N967 370 aa3.53□□□□□ -1.84
CHMP4A-202ENST00000524955 SLC24A4Q8NFF2 622 aa3.53□□□□□ -1.84
CHMP4A-202ENST00000524955 OR4D5Q8NGN0 318 aa3.53□□□□□ -1.84
CHMP4A-202ENST00000524955 OR1P1Q8NH06 330 aa3.53□□□□□ -1.84
CHMP4A-202ENST00000524955 ZNF502Q8TBZ5 544 aa3.53□□□□□ -1.84
CHMP4A-202ENST00000524955 CACNG8Q8WXS5 425 aa3.53□□□□□ -1.84
CHMP4A-202ENST00000524955 EEF1AKMT3Q96AZ1 226 aa3.53□□□□□ -1.84
CHMP4A-202ENST00000524955 OR4C12Q96R67 309 aa3.53□□□□□ -1.84
CHMP4A-202ENST00000524955 MARVELD1Q9BSK0 173 aa3.53□□□□□ -1.84
CHMP4A-202ENST00000524955 CHRDL1Q9BU40 450 aa3.53□□□□□ -1.84
CHMP4A-202ENST00000524955 HIPK2Q9H2X6 1198 aa3.53□□□□□ -1.84
CHMP4A-202ENST00000524955 HSPB7Q9UBY9 170 aa3.53□□□□□ -1.84
CHMP4A-202ENST00000524955 RCL1Q9Y2P8 373 aaKnown RBP3.53□□□□□ -1.84
CHMP4A-202ENST00000524955 TMED3Q9Y3Q3 217 aa3.53□□□□□ -1.84
CHMP4A-202ENST00000524955 ALG5Q9Y673 324 aa3.53□□□□□ -1.84
CHMP4A-202ENST00000524955 DNHD1Q96M86 4753 aa3.53□□□□□ -1.84
CHMP4A-202ENST00000524955 IGHV3OR16-13A0A075B7E8 117 aa3.52□□□□□ -1.85
CHMP4A-202ENST00000524955 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP3.52□□□□□ -1.85
CHMP4A-202ENST00000524955 IGHV3-74A0A0B4J1X5 117 aa3.52□□□□□ -1.85
CHMP4A-202ENST00000524955 IGHV3-66A0A0C4DH42 116 aa3.52□□□□□ -1.85
CHMP4A-202ENST00000524955 DUXBA0A1W2PPF3 345 aa3.52□□□□□ -1.85
CHMP4A-202ENST00000524955 C15orf62A8K5M9 175 aa3.52□□□□□ -1.85
CHMP4A-202ENST00000524955 SEC14L6B5MCN3 397 aa3.52□□□□□ -1.85
CHMP4A-202ENST00000524955 OVOL1O14753 267 aa3.52□□□□□ -1.85
CHMP4A-202ENST00000524955 SYNGR2O43760 224 aa3.52□□□□□ -1.85
CHMP4A-202ENST00000524955 SAP30O75446 220 aa3.52□□□□□ -1.85
CHMP4A-202ENST00000524955 PTTG1O95997 202 aa3.52□□□□□ -1.85
CHMP4A-202ENST00000524955 IFNA4P05014 189 aa3.52□□□□□ -1.85
CHMP4A-202ENST00000524955 OR8U8P0C7N1 319 aa3.52□□□□□ -1.85
CHMP4A-202ENST00000524955 HIST1H1BP16401 226 aaKnown RBP3.52□□□□□ -1.85
CHMP4A-202ENST00000524955 NPY1RP25929 384 aa3.52□□□□□ -1.85
CHMP4A-202ENST00000524955 ADMP35318 185 aa3.52□□□□□ -1.85
CHMP4A-202ENST00000524955 NKX2-1P43699 371 aaPredicted RBP3.52□□□□□ -1.85
CHMP4A-202ENST00000524955 BCAP31P51572 246 aa3.52□□□□□ -1.85
CHMP4A-202ENST00000524955 RND2P52198 227 aa3.52□□□□□ -1.85
CHMP4A-202ENST00000524955 PAX9P55771 341 aa3.52□□□□□ -1.85
CHMP4A-202ENST00000524955 H2BFSP57053 126 aa3.52□□□□□ -1.85
CHMP4A-202ENST00000524955 RRAS2P62070 204 aaPredicted RBP3.52□□□□□ -1.85
CHMP4A-202ENST00000524955 RUNX1Q01196 453 aa3.52□□□□□ -1.85
CHMP4A-202ENST00000524955 RAB32Q13637 225 aa3.52□□□□□ -1.85
CHMP4A-202ENST00000524955 FHL3Q13643 280 aa3.52□□□□□ -1.85
CHMP4A-202ENST00000524955 RGS21Q2M5E4 152 aa3.52□□□□□ -1.85
CHMP4A-202ENST00000524955 AARDQ4LEZ3 155 aa3.52□□□□□ -1.85
CHMP4A-202ENST00000524955 TM4SF20Q53R12 229 aa3.52□□□□□ -1.85
CHMP4A-202ENST00000524955 OR8G2PQ6IF36 304 aa3.52□□□□□ -1.85
CHMP4A-202ENST00000524955 UNQ9165/PRO28630Q6UXU0 137 aa3.52□□□□□ -1.85
CHMP4A-202ENST00000524955 HSD17B13Q7Z5P4 300 aaPredicted RBP3.52□□□□□ -1.85
CHMP4A-202ENST00000524955 CADM3Q8N126 398 aa3.52□□□□□ -1.85
CHMP4A-202ENST00000524955 OR52E5Q8NH55 327 aa3.52□□□□□ -1.85
CHMP4A-202ENST00000524955 NPIPB3Q92617 1050 aa3.52□□□□□ -1.85
CHMP4A-202ENST00000524955 ACY3Q96HD9 319 aa3.52□□□□□ -1.85
CHMP4A-202ENST00000524955 RCC1LQ96I51 464 aaKnown RBP3.52□□□□□ -1.85
CHMP4A-202ENST00000524955 ZNF414Q96IQ9 312 aa3.52□□□□□ -1.85
CHMP4A-202ENST00000524955 USMG5Q96IX5 58 aa3.52□□□□□ -1.85
CHMP4A-202ENST00000524955 SRSF8Q9BRL6 282 aaKnown RBP3.52□□□□□ -1.85
CHMP4A-202ENST00000524955 C20orf24Q9BUV8 137 aa3.52□□□□□ -1.85
CHMP4A-202ENST00000524955 GPN1Q9HCN4 374 aaPredicted RBP3.52□□□□□ -1.85
CHMP4A-202ENST00000524955 RANGRFQ9HD47 186 aaPredicted RBP3.52□□□□□ -1.85
CHMP4A-202ENST00000524955 C21orf62Q9NYP8 219 aa3.52□□□□□ -1.85
CHMP4A-202ENST00000524955 PSENENQ9NZ42 101 aa3.52□□□□□ -1.85
CHMP4A-202ENST00000524955 THYN1Q9P016 225 aa3.52□□□□□ -1.85
CHMP4A-202ENST00000524955 MGAT4CQ9UBM8 478 aa3.52□□□□□ -1.85
CHMP4A-202ENST00000524955 TET2Q6N021 2002 aaPredicted RBP3.51□□□□□ -1.85
CHMP4A-202ENST00000524955 TRBV7-1A0A0A6YYK4 115 aa3.51□□□□□ -1.85
CHMP4A-202ENST00000524955 SMCO3A2RU48 225 aa3.51□□□□□ -1.85
CHMP4A-202ENST00000524955 C7orf66A4D0T2 115 aa3.51□□□□□ -1.85
CHMP4A-202ENST00000524955 FAM24AA6NFZ4 105 aa3.51□□□□□ -1.85
CHMP4A-202ENST00000524955 K7EPK0 472 aa3.51□□□□□ -1.85
CHMP4A-202ENST00000524955 TGOLN2O43493 480 aa3.51□□□□□ -1.85
CHMP4A-202ENST00000524955 GNG7O60262 68 aa3.51□□□□□ -1.85
CHMP4A-202ENST00000524955 GGCTO75223 188 aaKnown RBP3.51□□□□□ -1.85
CHMP4A-202ENST00000524955 YIF1AO95070 293 aa3.51□□□□□ -1.85
CHMP4A-202ENST00000524955 LY86O95711 162 aa3.51□□□□□ -1.85
CHMP4A-202ENST00000524955 CTSGP08311 255 aa3.51□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms