RNA–Protein interactions for RNA: ENST00000523488.5

CSMD1-213, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 1 (best)

Gene CSMD1, Length 3,714 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-213ENST00000523488 OR4A5Q8NH83 315 aa6.91□□□□□ -1.3
CSMD1-213ENST00000523488 SH2D7A6NKC9 451 aaPredicted RBP6.91□□□□□ -1.3
CSMD1-213ENST00000523488 FSTL3O95633 263 aa6.91□□□□□ -1.3
CSMD1-213ENST00000523488 CELA2BP08218 269 aaPredicted RBP6.91□□□□□ -1.3
CSMD1-213ENST00000523488 OR5AL1P0C617 328 aa6.91□□□□□ -1.3
CSMD1-213ENST00000523488 PSG5Q15238 335 aa6.91□□□□□ -1.3
CSMD1-213ENST00000523488 TRAT1Q6PIZ9 186 aa6.91□□□□□ -1.3
CSMD1-213ENST00000523488 WDR82Q6UXN9 313 aa6.91□□□□□ -1.3
CSMD1-213ENST00000523488 FAM214BQ7L5A3 538 aa6.91□□□□□ -1.3
CSMD1-213ENST00000523488 PIP4P2Q8N4L2 257 aa6.91□□□□□ -1.3
CSMD1-213ENST00000523488 PHLDA1Q8WV24 401 aaPredicted RBP6.91□□□□□ -1.3
CSMD1-213ENST00000523488 POM121L2Q96KW2 1035 aa6.91□□□□□ -1.3
CSMD1-213ENST00000523488 LINC01600Q96MT4 127 aa6.91□□□□□ -1.3
CSMD1-213ENST00000523488 JMJD8Q96S16 334 aa6.91□□□□□ -1.3
CSMD1-213ENST00000523488 TMEM133Q9H2Q1 129 aa6.91□□□□□ -1.3
CSMD1-213ENST00000523488 SOX21Q9Y651 276 aaPredicted RBP6.91□□□□□ -1.3
CSMD1-213ENST00000523488 MED12LQ86YW9 2145 aa6.91□□□□□ -1.3
CSMD1-213ENST00000523488 ZNF32P17041 273 aa6.9□□□□□ -1.3
CSMD1-213ENST00000523488 ADAMTSL5Q6ZMM2 481 aa6.9□□□□□ -1.3
CSMD1-213ENST00000523488 FA2HQ7L5A8 372 aa6.9□□□□□ -1.3
CSMD1-213ENST00000523488 KIR3DL3Q8N743 410 aa6.9□□□□□ -1.3
CSMD1-213ENST00000523488 VSTM2AQ8TAG5 236 aa6.9□□□□□ -1.3
CSMD1-213ENST00000523488 LRRC29Q8WV35 223 aa6.9□□□□□ -1.3
CSMD1-213ENST00000523488 ZNF503Q96F45 646 aa6.9□□□□□ -1.3
CSMD1-213ENST00000523488 GRAMD2BQ96HH9 432 aa6.9□□□□□ -1.3
CSMD1-213ENST00000523488 MCRIP2Q9BUT9 160 aaKnown RBP6.9□□□□□ -1.3
CSMD1-213ENST00000523488 PKIBQ9C010 78 aa6.9□□□□□ -1.3
CSMD1-213ENST00000523488 TRAV24A0A0B4J272 114 aa6.9□□□□□ -1.3
CSMD1-213ENST00000523488 TRBV6-1A0A0K0K1D8 114 aa6.9□□□□□ -1.3
CSMD1-213ENST00000523488 NPIPB6E9PJ23 425 aa6.9□□□□□ -1.3
CSMD1-213ENST00000523488 APOHP02749 345 aaPredicted RBP6.9□□□□□ -1.3
CSMD1-213ENST00000523488 ADH4P08319 380 aa6.9□□□□□ -1.3
CSMD1-213ENST00000523488 DUTP33316 252 aaKnown RBP6.9□□□□□ -1.3
CSMD1-213ENST00000523488 FOXA3P55318 350 aaPredicted RBP6.9□□□□□ -1.3
CSMD1-213ENST00000523488 CR1LQ2VPA4 569 aa6.9□□□□□ -1.3
CSMD1-213ENST00000523488 CT55Q8WUE5 264 aa6.9□□□□□ -1.3
CSMD1-213ENST00000523488 FER1L6-AS2Q96M78 137 aa6.9□□□□□ -1.3
CSMD1-213ENST00000523488 GGTLC1Q9BX51 225 aa6.9□□□□□ -1.3
CSMD1-213ENST00000523488 PRSS22Q9GZN4 317 aa6.9□□□□□ -1.3
CSMD1-213ENST00000523488 TSSC4Q9Y5U2 329 aaPredicted RBP6.9□□□□□ -1.3
CSMD1-213ENST00000523488 ACACAQ13085 2346 aa6.9□□□□□ -1.3
CSMD1-213ENST00000523488 USF3Q68DE3 2245 aa6.9□□□□□ -1.31
CSMD1-213ENST00000523488 CA6P23280 308 aa6.9□□□□□ -1.31
CSMD1-213ENST00000523488 MRPL21Q7Z2W9 205 aaKnown RBP6.9□□□□□ -1.31
CSMD1-213ENST00000523488 MGST2Q99735 147 aa6.9□□□□□ -1.31
CSMD1-213ENST00000523488 B4GALT1P15291 398 aa6.89□□□□□ -1.31
CSMD1-213ENST00000523488 HOXB4P17483 251 aaPredicted RBP6.89□□□□□ -1.31
CSMD1-213ENST00000523488 SPINK2P20155 84 aa6.89□□□□□ -1.31
CSMD1-213ENST00000523488 MEF2CQ06413 473 aaPredicted RBP6.89□□□□□ -1.31
CSMD1-213ENST00000523488 DRAM1Q8N682 238 aa6.89□□□□□ -1.31
CSMD1-213ENST00000523488 OR2Z1Q8NG97 314 aa6.89□□□□□ -1.31
CSMD1-213ENST00000523488 C8orf46Q8TAG6 207 aa6.89□□□□□ -1.31
CSMD1-213ENST00000523488 H1FXQ92522 213 aaKnown RBP6.89□□□□□ -1.31
CSMD1-213ENST00000523488 TEX48A0A1B0GUV7 120 aa6.89□□□□□ -1.31
CSMD1-213ENST00000523488 EPOPA6NHQ4 379 aa6.89□□□□□ -1.31
CSMD1-213ENST00000523488 INS-IGF2F8WCM5 200 aa6.89□□□□□ -1.31
CSMD1-213ENST00000523488 CER1O95813 267 aa6.89□□□□□ -1.31
CSMD1-213ENST00000523488 COL9A1P20849 921 aa6.89□□□□□ -1.31
CSMD1-213ENST00000523488 GFERP55789 205 aa6.89□□□□□ -1.31
CSMD1-213ENST00000523488 PVRIGQ6DKI7 326 aa6.89□□□□□ -1.31
CSMD1-213ENST00000523488 NDFIP1Q9BT67 221 aa6.89□□□□□ -1.31
CSMD1-213ENST00000523488 GFRA4Q9GZZ7 299 aa6.89□□□□□ -1.31
CSMD1-213ENST00000523488 CRISPLD2Q9H0B8 497 aa6.89□□□□□ -1.31
CSMD1-213ENST00000523488 ZNF257Q9Y2Q1 563 aa6.89□□□□□ -1.31
CSMD1-213ENST00000523488 KLF12Q9Y4X4 402 aa6.89□□□□□ -1.31
CSMD1-213ENST00000523488 TET2Q6N021 2002 aaPredicted RBP6.89□□□□□ -1.31
CSMD1-213ENST00000523488 GAGE12HA6NDE8 117 aa6.89□□□□□ -1.31
CSMD1-213ENST00000523488 FTH1P19P0C7X4 201 aa6.89□□□□□ -1.31
CSMD1-213ENST00000523488 KIR3DS1Q14943 382 aa6.89□□□□□ -1.31
CSMD1-213ENST00000523488 RTL8BQ17RB0 113 aa6.89□□□□□ -1.31
CSMD1-213ENST00000523488 CEACAM21Q3KPI0 293 aa6.89□□□□□ -1.31
CSMD1-213ENST00000523488 CD300EQ496F6 205 aaPredicted RBP6.89□□□□□ -1.31
CSMD1-213ENST00000523488 OR1L3Q8NH93 324 aa6.89□□□□□ -1.31
CSMD1-213ENST00000523488 DUSP23Q9BVJ7 150 aa6.89□□□□□ -1.31
CSMD1-213ENST00000523488 ZNF355PQ9NSJ1 428 aa6.89□□□□□ -1.31
CSMD1-213ENST00000523488 HSPB8Q9UJY1 196 aa6.89□□□□□ -1.31
CSMD1-213ENST00000523488 VWC2LB2RUY7 222 aa6.88□□□□□ -1.31
CSMD1-213ENST00000523488 TCTAP57738 103 aa6.88□□□□□ -1.31
CSMD1-213ENST00000523488 PRR31Q5SQ13 230 aa6.88□□□□□ -1.31
CSMD1-213ENST00000523488 TREML4Q6UXN2 200 aa6.88□□□□□ -1.31
CSMD1-213ENST00000523488 BOD1L2Q8IYS8 172 aa6.88□□□□□ -1.31
CSMD1-213ENST00000523488 MTURNQ8N3F0 131 aa6.88□□□□□ -1.31
CSMD1-213ENST00000523488 OR4A16Q8NH70 328 aa6.88□□□□□ -1.31
CSMD1-213ENST00000523488 ZNF488Q96MN9 340 aa6.88□□□□□ -1.31
CSMD1-213ENST00000523488 C19orf24Q9BVV8 132 aa6.88□□□□□ -1.31
CSMD1-213ENST00000523488 TMEM167BQ9NRX6 74 aa6.88□□□□□ -1.31
CSMD1-213ENST00000523488 IGHV5-51A0A0C4DH38 117 aa6.88□□□□□ -1.31
CSMD1-213ENST00000523488 SERTM2A0A1B0GWG4 89 aa6.88□□□□□ -1.31
CSMD1-213ENST00000523488 C2CD4DB7Z1M9 353 aa6.88□□□□□ -1.31
CSMD1-213ENST00000523488 LINC01619G3V211 115 aa6.88□□□□□ -1.31
CSMD1-213ENST00000523488 LIPFP07098 398 aa6.88□□□□□ -1.31
CSMD1-213ENST00000523488 CSN3P07498 182 aa6.88□□□□□ -1.31
CSMD1-213ENST00000523488 CEACAM16Q2WEN9 425 aa6.88□□□□□ -1.31
CSMD1-213ENST00000523488 LYSMD4Q5XG99 296 aa6.88□□□□□ -1.31
CSMD1-213ENST00000523488 HS3ST6Q96QI5 342 aa6.88□□□□□ -1.31
CSMD1-213ENST00000523488 CDX2Q99626 313 aaPredicted RBP6.88□□□□□ -1.31
CSMD1-213ENST00000523488 GEMIN7Q9H840 131 aaKnown RBP6.88□□□□□ -1.31
CSMD1-213ENST00000523488 DUSP13Q9UII6 198 aa6.88□□□□□ -1.31
CSMD1-213ENST00000523488 MRPS17Q9Y2R5 130 aaKnown RBP6.88□□□□□ -1.31
CSMD1-213ENST00000523488 CDH23Q9H251 3354 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms