RNA–Protein interactions for RNA: ENST00000522900.5

SPIDR-220, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 3

Gene SPIDR, Length 692 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-220ENST00000522900 C5orf66Q9H5L9 145 aa13.96□□□□□ -0.17
SPIDR-220ENST00000522900 DAZ1Q9NQZ3 744 aaKnown RBP13.96□□□□□ -0.17
SPIDR-220ENST00000522900 CCDC59Q9P031 241 aaKnown RBP13.96□□□□□ -0.17
SPIDR-220ENST00000522900 K7EMT4 169 aa13.95□□□□□ -0.18
SPIDR-220ENST00000522900 UCP1P25874 307 aa13.95□□□□□ -0.18
SPIDR-220ENST00000522900 ETV6P41212 452 aa13.95□□□□□ -0.18
SPIDR-220ENST00000522900 Q6ZRM9 215 aa13.95□□□□□ -0.18
SPIDR-220ENST00000522900 CCDC71LQ8N9Z2 235 aa13.95□□□□□ -0.18
SPIDR-220ENST00000522900 OR4C16Q8NGL9 310 aa13.95□□□□□ -0.18
SPIDR-220ENST00000522900 SLIRPQ9GZT3 109 aaKnown RBP13.95□□□□□ -0.18
SPIDR-220ENST00000522900 GAR1Q9NY12 217 aaKnown RBP13.95□□□□□ -0.18
SPIDR-220ENST00000522900 CTDSPLO15194 276 aa13.94□□□□□ -0.18
SPIDR-220ENST00000522900 NUPL2O15504 423 aaKnown RBP13.94□□□□□ -0.18
SPIDR-220ENST00000522900 IFNA17P01571 189 aa13.94□□□□□ -0.18
SPIDR-220ENST00000522900 OR5AC1P0C628 307 aa13.94□□□□□ -0.18
SPIDR-220ENST00000522900 RPL5P46777 297 aaKnown RBP13.94□□□□□ -0.18
SPIDR-220ENST00000522900 MEF2DQ14814 521 aa13.94□□□□□ -0.18
SPIDR-220ENST00000522900 ANKRD55Q3KP44 614 aa13.94□□□□□ -0.18
SPIDR-220ENST00000522900 LHFPL5Q8TAF8 219 aa13.94□□□□□ -0.18
SPIDR-220ENST00000522900 BCL7BQ9BQE9 202 aa13.94□□□□□ -0.18
SPIDR-220ENST00000522900 C6orf62Q9GZU0 229 aaPredicted RBP13.94□□□□□ -0.18
SPIDR-220ENST00000522900 C15orf62A8K5M9 175 aa13.93□□□□□ -0.18
SPIDR-220ENST00000522900 DISC1C4P0D8 188 aa13.93□□□□□ -0.18
SPIDR-220ENST00000522900 H3BMQ9 156 aa13.93□□□□□ -0.18
SPIDR-220ENST00000522900 ATG12O94817 140 aa13.93□□□□□ -0.18
SPIDR-220ENST00000522900 AKAIN1P0CW23 69 aa13.93□□□□□ -0.18
SPIDR-220ENST00000522900 FCGR2BP31994 310 aaPredicted RBP13.93□□□□□ -0.18
SPIDR-220ENST00000522900 SLC35G3Q8N808 338 aa13.93□□□□□ -0.18
SPIDR-220ENST00000522900 GLYATL2Q8WU03 294 aa13.93□□□□□ -0.18
SPIDR-220ENST00000522900 TXN2Q99757 166 aa13.93□□□□□ -0.18
SPIDR-220ENST00000522900 NXF2Q9GZY0 626 aaKnown RBP13.93□□□□□ -0.18
SPIDR-220ENST00000522900 UBQLN2Q9UHD9 624 aa13.93□□□□□ -0.18
SPIDR-220ENST00000522900 SMPXQ9UHP9 88 aa13.93□□□□□ -0.18
SPIDR-220ENST00000522900 GPR132Q9UNW8 380 aa13.93□□□□□ -0.18
SPIDR-220ENST00000522900 IGHV3-49A0A0A0MS15 119 aa13.92□□□□□ -0.18
SPIDR-220ENST00000522900 TEX13DA0A0J9YY54 714 aaPredicted RBP13.92□□□□□ -0.18
SPIDR-220ENST00000522900 INS-IGF2F8WCM5 200 aa13.92□□□□□ -0.18
SPIDR-220ENST00000522900 TSPAN4O14817 238 aa13.92□□□□□ -0.18
SPIDR-220ENST00000522900 YIF1AO95070 293 aa13.92□□□□□ -0.18
SPIDR-220ENST00000522900 CDS2O95674 445 aa13.92□□□□□ -0.18
SPIDR-220ENST00000522900 TNFSF8P32971 234 aa13.92□□□□□ -0.18
SPIDR-220ENST00000522900 SNCAP37840 140 aa13.92□□□□□ -0.18
SPIDR-220ENST00000522900 RELQ04864 619 aaPredicted RBP13.92□□□□□ -0.18
SPIDR-220ENST00000522900 RRNAD1Q96FB5 475 aaKnown RBP13.92□□□□□ -0.18
SPIDR-220ENST00000522900 SPAG8Q99932 426 aaPredicted RBP13.92□□□□□ -0.18
SPIDR-220ENST00000522900 SOSTQ9BQB4 213 aa13.92□□□□□ -0.18
SPIDR-220ENST00000522900 TMEM222Q9H0R3 208 aa13.92□□□□□ -0.18
SPIDR-220ENST00000522900 NAA60Q9H7X0 242 aa13.92□□□□□ -0.18
SPIDR-220ENST00000522900 C14orf166Q9Y224 244 aaKnown RBP13.92□□□□□ -0.18
SPIDR-220ENST00000522900 GSTZ1O43708 216 aaPredicted RBP13.91□□□□□ -0.18
SPIDR-220ENST00000522900 GNG7O60262 68 aa13.91□□□□□ -0.18
SPIDR-220ENST00000522900 RNASE2P10153 161 aaKnown RBP13.91□□□□□ -0.18
SPIDR-220ENST00000522900 MLANAQ16655 118 aa13.91□□□□□ -0.18
SPIDR-220ENST00000522900 PVRIGQ6DKI7 326 aa13.91□□□□□ -0.18
SPIDR-220ENST00000522900 SELENOHQ8IZQ5 122 aaKnown RBP13.91□□□□□ -0.18
SPIDR-220ENST00000522900 OR51S1Q8NGJ8 323 aa13.91□□□□□ -0.18
SPIDR-220ENST00000522900 OR10C1Q96KK4 312 aa13.91□□□□□ -0.18
SPIDR-220ENST00000522900 RNF2Q99496 336 aa13.91□□□□□ -0.18
SPIDR-220ENST00000522900 GGTLC1Q9BX51 225 aa13.91□□□□□ -0.18
SPIDR-220ENST00000522900 IGHV3OR16-13A0A075B7E8 117 aa13.9□□□□□ -0.18
SPIDR-220ENST00000522900 LOC102724200A0A096LPH7 203 aaPredicted RBP13.9□□□□□ -0.18
SPIDR-220ENST00000522900 IGHV3-74A0A0B4J1X5 117 aa13.9□□□□□ -0.18
SPIDR-220ENST00000522900 IGHV7-4-1A0A0J9YVY3 117 aa13.9□□□□□ -0.18
SPIDR-220ENST00000522900 ANKRD20A5PA0PJZ0 165 aa13.9□□□□□ -0.18
SPIDR-220ENST00000522900 CHEK1O14757 476 aa13.9□□□□□ -0.18
SPIDR-220ENST00000522900 B3GALNT1O75752 331 aa13.9□□□□□ -0.18
SPIDR-220ENST00000522900 HOXA1P49639 335 aaPredicted RBP13.9□□□□□ -0.18
SPIDR-220ENST00000522900 SURF2Q15527 256 aaPredicted RBP13.9□□□□□ -0.18
SPIDR-220ENST00000522900 LAMTOR1Q6IAA8 161 aa13.9□□□□□ -0.18
SPIDR-220ENST00000522900 RNASE11Q8TAA1 199 aaKnown RBP13.9□□□□□ -0.18
SPIDR-220ENST00000522900 GPR146Q96CH1 333 aa13.9□□□□□ -0.18
SPIDR-220ENST00000522900 PDCD10Q9BUL8 212 aa13.9□□□□□ -0.18
SPIDR-220ENST00000522900 RHPN1-AS1Q9BWJ2 59 aa13.9□□□□□ -0.18
SPIDR-220ENST00000522900 MRPL36Q9P0J6 103 aaKnown RBP13.9□□□□□ -0.18
SPIDR-220ENST00000522900 RABL2AQ9UBK7 228 aaPredicted RBP13.9□□□□□ -0.18
SPIDR-220ENST00000522900 RABL2BQ9UNT1 228 aa13.9□□□□□ -0.18
SPIDR-220ENST00000522900 TENM2Q9NT68 2774 aa13.9□□□□□ -0.18
SPIDR-220ENST00000522900 FABP12A6NFH5 140 aa13.89□□□□□ -0.19
SPIDR-220ENST00000522900 CRYM-AS1A6NIL9 109 aa13.89□□□□□ -0.19
SPIDR-220ENST00000522900 TMEM50AO95807 157 aa13.89□□□□□ -0.19
SPIDR-220ENST00000522900 ODF3L2Q3SX64 289 aa13.89□□□□□ -0.19
SPIDR-220ENST00000522900 TOMM20LQ6UXN7 152 aa13.89□□□□□ -0.19
SPIDR-220ENST00000522900 TMEM116Q8NCL8 245 aa13.89□□□□□ -0.19
SPIDR-220ENST00000522900 DUSP18Q8NEJ0 188 aa13.89□□□□□ -0.19
SPIDR-220ENST00000522900 MCFD2Q8NI22 146 aa13.89□□□□□ -0.19
SPIDR-220ENST00000522900 FNDC4Q9H6D8 234 aaPredicted RBP13.89□□□□□ -0.19
SPIDR-220ENST00000522900 PRR13Q9NZ81 148 aa13.89□□□□□ -0.19
SPIDR-220ENST00000522900 RSL24D1Q9UHA3 163 aaKnown RBP13.89□□□□□ -0.19
SPIDR-220ENST00000522900 TRAV14DV4A0A0A6YYC5 116 aa13.88□□□□□ -0.19
SPIDR-220ENST00000522900 NOL3O60936 208 aaKnown RBP13.88□□□□□ -0.19
SPIDR-220ENST00000522900 NPBWR1P48145 328 aa13.88□□□□□ -0.19
SPIDR-220ENST00000522900 DHODHQ02127 395 aa13.88□□□□□ -0.19
SPIDR-220ENST00000522900 TMEM268Q5VZI3 342 aa13.88□□□□□ -0.19
SPIDR-220ENST00000522900 RBPMSQ93062 196 aaKnown RBP13.88□□□□□ -0.19
SPIDR-220ENST00000522900 TMEM230Q96A57 120 aa13.88□□□□□ -0.19
SPIDR-220ENST00000522900 PRRT1Q99946 306 aa13.88□□□□□ -0.19
SPIDR-220ENST00000522900 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.88□□□□□ -0.19
SPIDR-220ENST00000522900 APOHP02749 345 aaPredicted RBP13.87□□□□□ -0.19
SPIDR-220ENST00000522900 SUB1P53999 127 aaKnown RBP eCLIP13.87□□□□□ -0.19
SPIDR-220ENST00000522900 SPCS3P61009 180 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms