RNA–Protein interactions for RNA: ENST00000522658.5

PABPC1-220, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 736 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-220ENST00000522658 TMEM17Q86X19 198 aa4.56□□□□□ -1.68
PABPC1-220ENST00000522658 Q8N9P0 234 aaPredicted RBP4.56□□□□□ -1.68
PABPC1-220ENST00000522658 ZBTB34Q8NCN2 500 aa4.56□□□□□ -1.68
PABPC1-220ENST00000522658 OR13F1Q8NGS4 319 aa4.56□□□□□ -1.68
PABPC1-220ENST00000522658 NUDCD2Q8WVJ2 157 aa4.56□□□□□ -1.68
PABPC1-220ENST00000522658 ATP6V0BQ99437 205 aa4.56□□□□□ -1.68
PABPC1-220ENST00000522658 RNF2Q99496 336 aa4.56□□□□□ -1.68
PABPC1-220ENST00000522658 NDUFAF3Q9BU61 184 aa4.56□□□□□ -1.68
PABPC1-220ENST00000522658 RHPN1-AS1Q9BWJ2 59 aa4.56□□□□□ -1.68
PABPC1-220ENST00000522658 SLC5A7Q9GZV3 580 aa4.56□□□□□ -1.68
PABPC1-220ENST00000522658 TMEM140Q9NV12 185 aa4.56□□□□□ -1.68
PABPC1-220ENST00000522658 COMMD9Q9P000 198 aa4.56□□□□□ -1.68
PABPC1-220ENST00000522658 IGHV3-49A0A0A0MS15 119 aa4.55□□□□□ -1.68
PABPC1-220ENST00000522658 IGKV1D-13A0A0B4J2D9 117 aa4.55□□□□□ -1.68
PABPC1-220ENST00000522658 IGLC7A0M8Q6 106 aa4.55□□□□□ -1.68
PABPC1-220ENST00000522658 C15orf61A6NNL5 157 aa4.55□□□□□ -1.68
PABPC1-220ENST00000522658 E7EUB6 86 aa4.55□□□□□ -1.68
PABPC1-220ENST00000522658 M0R2N4 97 aa4.55□□□□□ -1.68
PABPC1-220ENST00000522658 UPK2O00526 184 aa4.55□□□□□ -1.68
PABPC1-220ENST00000522658 RBFOX2O43251 390 aaKnown RBP eCLIP4.55□□□□□ -1.68
PABPC1-220ENST00000522658 GNG7O60262 68 aa4.55□□□□□ -1.68
PABPC1-220ENST00000522658 S1PR2O95136 353 aa4.55□□□□□ -1.68
PABPC1-220ENST00000522658 SERPINE2P07093 398 aa4.55□□□□□ -1.68
PABPC1-220ENST00000522658 GNAO1P09471 354 aa4.55□□□□□ -1.68
PABPC1-220ENST00000522658 IGKV1-13P0DP09 117 aa4.55□□□□□ -1.68
PABPC1-220ENST00000522658 SPP1P10451 314 aa4.55□□□□□ -1.68
PABPC1-220ENST00000522658 HLA-DMBP28068 263 aa4.55□□□□□ -1.68
PABPC1-220ENST00000522658 MFAP4P55083 255 aa4.55□□□□□ -1.68
PABPC1-220ENST00000522658 DEFB131AP59861 70 aa4.55□□□□□ -1.68
PABPC1-220ENST00000522658 OR2B8PP59922 312 aa4.55□□□□□ -1.68
PABPC1-220ENST00000522658 NUTF2P61970 127 aaKnown RBP4.55□□□□□ -1.68
PABPC1-220ENST00000522658 HACD4Q5VWC8 232 aa4.55□□□□□ -1.68
PABPC1-220ENST00000522658 LEMD1Q68G75 181 aa4.55□□□□□ -1.68
PABPC1-220ENST00000522658 MORN3Q6PF18 240 aaPredicted RBP4.55□□□□□ -1.68
PABPC1-220ENST00000522658 Q6ZTC4 211 aa4.55□□□□□ -1.68
PABPC1-220ENST00000522658 GIMAP1Q8WWP7 306 aa4.55□□□□□ -1.68
PABPC1-220ENST00000522658 PINX1Q96BK5 328 aaKnown RBP4.55□□□□□ -1.68
PABPC1-220ENST00000522658 TSC22D3Q99576 134 aa4.55□□□□□ -1.68
PABPC1-220ENST00000522658 RNF126Q9BV68 326 aa4.55□□□□□ -1.68
PABPC1-220ENST00000522658 HRH4Q9H3N8 390 aa4.55□□□□□ -1.68
PABPC1-220ENST00000522658 IFT46Q9NQC8 304 aa4.55□□□□□ -1.68
PABPC1-220ENST00000522658 FKBP11Q9NYL4 201 aa4.55□□□□□ -1.68
PABPC1-220ENST00000522658 SMPXQ9UHP9 88 aa4.55□□□□□ -1.68
PABPC1-220ENST00000522658 ANXA10Q9UJ72 324 aa4.55□□□□□ -1.68
PABPC1-220ENST00000522658 PRNDQ9UKY0 176 aa4.55□□□□□ -1.68
PABPC1-220ENST00000522658 BLOC1S6Q9UL45 172 aa4.55□□□□□ -1.68
PABPC1-220ENST00000522658 KCNK7Q9Y2U2 307 aa4.55□□□□□ -1.68
PABPC1-220ENST00000522658 OR51B2Q9Y5P1 312 aa4.55□□□□□ -1.68
PABPC1-220ENST00000522658 F11RQ9Y624 299 aaKnown RBP4.55□□□□□ -1.68
PABPC1-220ENST00000522658 KMT2AQ03164 3969 aa4.54□□□□□ -1.68
PABPC1-220ENST00000522658 IGHV3OR16-13A0A075B7E8 117 aa4.54□□□□□ -1.68
PABPC1-220ENST00000522658 DEFB131BA0A096LNP1 70 aa4.54□□□□□ -1.68
PABPC1-220ENST00000522658 IGHV3-74A0A0B4J1X5 117 aa4.54□□□□□ -1.68
PABPC1-220ENST00000522658 IGHV4-28A0A0C4DH34 117 aa4.54□□□□□ -1.68
PABPC1-220ENST00000522658 A0A1W2PS18 150 aa4.54□□□□□ -1.68
PABPC1-220ENST00000522658 IFITM5A6NNB3 132 aa4.54□□□□□ -1.68
PABPC1-220ENST00000522658 CHEK1O14757 476 aa4.54□□□□□ -1.68
PABPC1-220ENST00000522658 PPYP01298 95 aa4.54□□□□□ -1.68
PABPC1-220ENST00000522658 AMBPP02760 352 aa4.54□□□□□ -1.68
PABPC1-220ENST00000522658 FGF2P09038 288 aa4.54□□□□□ -1.68
PABPC1-220ENST00000522658 FCGR2CP31995 323 aa4.54□□□□□ -1.68
PABPC1-220ENST00000522658 FABP5Q01469 135 aa4.54□□□□□ -1.68
PABPC1-220ENST00000522658 IRF3Q14653 427 aa4.54□□□□□ -1.68
PABPC1-220ENST00000522658 MSMO1Q15800 293 aa4.54□□□□□ -1.68
PABPC1-220ENST00000522658 TMEM91Q6ZNR0 172 aa4.54□□□□□ -1.68
PABPC1-220ENST00000522658 ZNF367Q7RTV3 350 aa4.54□□□□□ -1.68
PABPC1-220ENST00000522658 CMTM1Q8IZ96 169 aa4.54□□□□□ -1.68
PABPC1-220ENST00000522658 POM121L12Q8N7R1 296 aa4.54□□□□□ -1.68
PABPC1-220ENST00000522658 DUSP18Q8NEJ0 188 aa4.54□□□□□ -1.68
PABPC1-220ENST00000522658 BEST4Q8NFU0 473 aa4.54□□□□□ -1.68
PABPC1-220ENST00000522658 STXBP6Q8NFX7 210 aa4.54□□□□□ -1.68
PABPC1-220ENST00000522658 OR10W1Q8NGF6 305 aa4.54□□□□□ -1.68
PABPC1-220ENST00000522658 MOB3AQ96BX8 217 aa4.54□□□□□ -1.68
PABPC1-220ENST00000522658 GRAMD2BQ96HH9 432 aa4.54□□□□□ -1.68
PABPC1-220ENST00000522658 GFI1Q99684 422 aa4.54□□□□□ -1.68
PABPC1-220ENST00000522658 CHRDL1Q9BU40 450 aa4.54□□□□□ -1.68
PABPC1-220ENST00000522658 C1QTNF4Q9BXJ3 329 aa4.54□□□□□ -1.68
PABPC1-220ENST00000522658 PLEKHA2Q9HB19 425 aa4.54□□□□□ -1.68
PABPC1-220ENST00000522658 CCL28Q9NRJ3 127 aa4.54□□□□□ -1.68
PABPC1-220ENST00000522658 TMEM14BQ9NUH8 114 aa4.54□□□□□ -1.68
PABPC1-220ENST00000522658 APLNQ9ULZ1 77 aa4.54□□□□□ -1.68
PABPC1-220ENST00000522658 LSM2Q9Y333 95 aaKnown RBP4.54□□□□□ -1.68
PABPC1-220ENST00000522658 IGKV1D-8A0A087WSZ0 117 aa4.53□□□□□ -1.68
PABPC1-220ENST00000522658 TRAV2A0A0B4J234 112 aa4.53□□□□□ -1.68
PABPC1-220ENST00000522658 TRAV1-2A0A0B4J238 106 aa4.53□□□□□ -1.68
PABPC1-220ENST00000522658 TEX48A0A1B0GUV7 120 aa4.53□□□□□ -1.68
PABPC1-220ENST00000522658 A0A1B0GW64 132 aa4.53□□□□□ -1.68
PABPC1-220ENST00000522658 EBAG9O00559 213 aa4.53□□□□□ -1.68
PABPC1-220ENST00000522658 RLN1P04808 185 aa4.53□□□□□ -1.68
PABPC1-220ENST00000522658 CD37P11049 281 aa4.53□□□□□ -1.68
PABPC1-220ENST00000522658 CBX5P45973 191 aa4.53□□□□□ -1.68
PABPC1-220ENST00000522658 NPBWR1P48145 328 aa4.53□□□□□ -1.68
PABPC1-220ENST00000522658 OR10A3P58181 314 aa4.53□□□□□ -1.68
PABPC1-220ENST00000522658 ERHP84090 104 aaKnown RBP4.53□□□□□ -1.68
PABPC1-220ENST00000522658 ZNF773Q6PK81 442 aa4.53□□□□□ -1.68
PABPC1-220ENST00000522658 CLRN3Q8NCR9 226 aa4.53□□□□□ -1.68
PABPC1-220ENST00000522658 OR4A16Q8NH70 328 aa4.53□□□□□ -1.68
PABPC1-220ENST00000522658 SLC25A46Q96AG3 418 aa4.53□□□□□ -1.68
PABPC1-220ENST00000522658 METTL26Q96S19 204 aa4.53□□□□□ -1.68
PABPC1-220ENST00000522658 MGLLQ99685 303 aa4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms