RNA–Protein interactions for RNA: ENST00000522243.5

SDCBP-209, Transcript of syndecan binding protein, humanhuman

TSL 5

Gene SDCBP, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-209ENST00000522243 ST8SIA3O43173 380 aa15.39■□□□□ 0.05
SDCBP-209ENST00000522243 GNG7O60262 68 aa15.39■□□□□ 0.05
SDCBP-209ENST00000522243 CD74P04233 296 aa15.39■□□□□ 0.05
SDCBP-209ENST00000522243 TBPP20226 339 aa15.39■□□□□ 0.05
SDCBP-209ENST00000522243 STEAP1BQ6NZ63 245 aa15.39■□□□□ 0.05
SDCBP-209ENST00000522243 SLC35G3Q8N808 338 aa15.39■□□□□ 0.05
SDCBP-209ENST00000522243 TERB2Q8NHR7 220 aa15.39■□□□□ 0.05
SDCBP-209ENST00000522243 ZFAND1Q8TCF1 268 aa15.39■□□□□ 0.05
SDCBP-209ENST00000522243 C15orf40Q8WUR7 153 aa15.39■□□□□ 0.05
SDCBP-209ENST00000522243 TXN2Q99757 166 aa15.39■□□□□ 0.05
SDCBP-209ENST00000522243 DYNC2H1Q8NCM8 4307 aaKnown RBP15.38■□□□□ 0.05
SDCBP-209ENST00000522243 IGHV3OR16-13A0A075B7E8 117 aa15.38■□□□□ 0.05
SDCBP-209ENST00000522243 IGHV3-74A0A0B4J1X5 117 aa15.38■□□□□ 0.05
SDCBP-209ENST00000522243 IGHV7-4-1A0A0J9YVY3 117 aa15.38■□□□□ 0.05
SDCBP-209ENST00000522243 GABARAPH6UMI1 98 aa15.38■□□□□ 0.05
SDCBP-209ENST00000522243 IFNA17P01571 189 aa15.38■□□□□ 0.05
SDCBP-209ENST00000522243 P0C879 139 aa15.38■□□□□ 0.05
SDCBP-209ENST00000522243 FCGR2BP31994 310 aaPredicted RBP15.38■□□□□ 0.05
SDCBP-209ENST00000522243 ETV6P41212 452 aa15.38■□□□□ 0.05
SDCBP-209ENST00000522243 ODF3L2Q3SX64 289 aa15.38■□□□□ 0.05
SDCBP-209ENST00000522243 CCDC71LQ8N9Z2 235 aa15.38■□□□□ 0.05
SDCBP-209ENST00000522243 IL17DQ8TAD2 202 aa15.38■□□□□ 0.05
SDCBP-209ENST00000522243 RNF2Q99496 336 aa15.38■□□□□ 0.05
SDCBP-209ENST00000522243 RHPN1-AS1Q9BWJ2 59 aa15.38■□□□□ 0.05
SDCBP-209ENST00000522243 NXF2Q9GZY0 626 aaKnown RBP15.38■□□□□ 0.05
SDCBP-209ENST00000522243 IGKV3-7A0A075B6H7 116 aa15.37■□□□□ 0.05
SDCBP-209ENST00000522243 A0A0G2JRQ6 117 aa15.37■□□□□ 0.05
SDCBP-209ENST00000522243 CHEK1O14757 476 aa15.37■□□□□ 0.05
SDCBP-209ENST00000522243 SNCAP37840 140 aa15.37■□□□□ 0.05
SDCBP-209ENST00000522243 TFPI2P48307 235 aa15.37■□□□□ 0.05
SDCBP-209ENST00000522243 CLVS1Q8IUQ0 354 aaPredicted RBP15.37■□□□□ 0.05
SDCBP-209ENST00000522243 TMEM116Q8NCL8 245 aa15.37■□□□□ 0.05
SDCBP-209ENST00000522243 PDCD10Q9BUL8 212 aa15.37■□□□□ 0.05
SDCBP-209ENST00000522243 OR4C46A6NHA9 309 aa15.36■□□□□ 0.05
SDCBP-209ENST00000522243 ATG12O94817 140 aa15.36■□□□□ 0.05
SDCBP-209ENST00000522243 RPL35AP18077 110 aaKnown RBP15.36■□□□□ 0.05
SDCBP-209ENST00000522243 UCP1P25874 307 aa15.36■□□□□ 0.05
SDCBP-209ENST00000522243 RNASE11Q8TAA1 199 aaKnown RBP15.36■□□□□ 0.05
SDCBP-209ENST00000522243 TRAV14DV4A0A0A6YYC5 116 aa15.35■□□□□ 0.05
SDCBP-209ENST00000522243 HOXA1P49639 335 aaPredicted RBP15.35■□□□□ 0.05
SDCBP-209ENST00000522243 APOC4P55056 127 aa15.35■□□□□ 0.05
SDCBP-209ENST00000522243 DUSP18Q8NEJ0 188 aa15.35■□□□□ 0.05
SDCBP-209ENST00000522243 RRNAD1Q96FB5 475 aaKnown RBP15.35■□□□□ 0.05
SDCBP-209ENST00000522243 OR10C1Q96KK4 312 aa15.35■□□□□ 0.05
SDCBP-209ENST00000522243 OR5AC1P0C628 307 aa15.34■□□□□ 0.05
SDCBP-209ENST00000522243 RNASE2P10153 161 aaKnown RBP15.34■□□□□ 0.05
SDCBP-209ENST00000522243 IL18Q14116 193 aa15.34■□□□□ 0.05
SDCBP-209ENST00000522243 ZNF124Q15973 351 aa15.34■□□□□ 0.05
SDCBP-209ENST00000522243 DEFB135Q30KP9 77 aa15.34■□□□□ 0.05
SDCBP-209ENST00000522243 TOMM20LQ6UXN7 152 aa15.34■□□□□ 0.05
SDCBP-209ENST00000522243 Q6ZRM9 215 aa15.34■□□□□ 0.05
SDCBP-209ENST00000522243 APRG1Q8IVJ8 170 aa15.34■□□□□ 0.05
SDCBP-209ENST00000522243 DIRAS2Q96HU8 199 aa15.34■□□□□ 0.05
SDCBP-209ENST00000522243 RTBDNQ9BSG5 229 aaPredicted RBP15.34■□□□□ 0.05
SDCBP-209ENST00000522243 C14orf166Q9Y224 244 aaKnown RBP15.34■□□□□ 0.05
SDCBP-209ENST00000522243 INS-IGF2F8WCM5 200 aa15.33■□□□□ 0.04
SDCBP-209ENST00000522243 NPBWR1P48145 328 aa15.33■□□□□ 0.04
SDCBP-209ENST00000522243 MRPS10P82664 201 aaKnown RBP15.33■□□□□ 0.04
SDCBP-209ENST00000522243 SSBP1Q04837 148 aaKnown RBP15.33■□□□□ 0.04
SDCBP-209ENST00000522243 MEF2DQ14814 521 aa15.33■□□□□ 0.04
SDCBP-209ENST00000522243 GBGT1Q8N5D6 347 aa15.33■□□□□ 0.04
SDCBP-209ENST00000522243 SMIM4Q8WVI0 70 aa15.33■□□□□ 0.04
SDCBP-209ENST00000522243 ENY2Q9NPA8 101 aa15.33■□□□□ 0.04
SDCBP-209ENST00000522243 STARD9Q9P2P6 4700 aa15.33■□□□□ 0.04
SDCBP-209ENST00000522243 IGHV3-66A0A0C4DH42 116 aa15.32■□□□□ 0.04
SDCBP-209ENST00000522243 TEX13DA0A0J9YY54 714 aaPredicted RBP15.32■□□□□ 0.04
SDCBP-209ENST00000522243 DISC1C4P0D8 188 aa15.32■□□□□ 0.04
SDCBP-209ENST00000522243 SPRY2O43597 315 aa15.32■□□□□ 0.04
SDCBP-209ENST00000522243 TMEM50AO95807 157 aa15.32■□□□□ 0.04
SDCBP-209ENST00000522243 APOHP02749 345 aaPredicted RBP15.32■□□□□ 0.04
SDCBP-209ENST00000522243 SUB1P53999 127 aaKnown RBP eCLIP15.32■□□□□ 0.04
SDCBP-209ENST00000522243 MLANAQ16655 118 aa15.32■□□□□ 0.04
SDCBP-209ENST00000522243 OR4C16Q8NGL9 310 aa15.32■□□□□ 0.04
SDCBP-209ENST00000522243 LHFPL5Q8TAF8 219 aa15.32■□□□□ 0.04
SDCBP-209ENST00000522243 DYNC2LI1Q8TCX1 351 aa15.32■□□□□ 0.04
SDCBP-209ENST00000522243 GLYATL2Q8WU03 294 aa15.32■□□□□ 0.04
SDCBP-209ENST00000522243 TMEM222Q9H0R3 208 aa15.32■□□□□ 0.04
SDCBP-209ENST00000522243 NAA60Q9H7X0 242 aa15.32■□□□□ 0.04
SDCBP-209ENST00000522243 MRPL36Q9P0J6 103 aaKnown RBP15.32■□□□□ 0.04
SDCBP-209ENST00000522243 CSMD3Q7Z407 3707 aa15.31■□□□□ 0.04
SDCBP-209ENST00000522243 A0A0J9YWU9 116 aa15.31■□□□□ 0.04
SDCBP-209ENST00000522243 AKAIN1P0CW23 69 aa15.31■□□□□ 0.04
SDCBP-209ENST00000522243 FAM90A2PQ658T7 463 aa15.31■□□□□ 0.04
SDCBP-209ENST00000522243 PVRIGQ6DKI7 326 aa15.31■□□□□ 0.04
SDCBP-209ENST00000522243 ZNF600Q6ZNG1 722 aa15.31■□□□□ 0.04
SDCBP-209ENST00000522243 Q6ZWC4 215 aa15.31■□□□□ 0.04
SDCBP-209ENST00000522243 TCF24Q7RTU0 167 aa15.31■□□□□ 0.04
SDCBP-209ENST00000522243 WFDC3Q8IUB2 231 aa15.31■□□□□ 0.04
SDCBP-209ENST00000522243 STPG3Q8N7X2 389 aa15.31■□□□□ 0.04
SDCBP-209ENST00000522243 RAB2BQ8WUD1 216 aa15.31■□□□□ 0.04
SDCBP-209ENST00000522243 ST8SIA2Q92186 375 aa15.31■□□□□ 0.04
SDCBP-209ENST00000522243 GINS3Q9BRX5 216 aa15.31■□□□□ 0.04
SDCBP-209ENST00000522243 FNDC4Q9H6D8 234 aaPredicted RBP15.31■□□□□ 0.04
SDCBP-209ENST00000522243 ZFAND3Q9H8U3 227 aa15.31■□□□□ 0.04
SDCBP-209ENST00000522243 PUS1Q9Y606 427 aaKnown RBP eCLIP15.31■□□□□ 0.04
SDCBP-209ENST00000522243 A0A1B0GU03 582 aa15.3■□□□□ 0.04
SDCBP-209ENST00000522243 B3GALNT1O75752 331 aa15.3■□□□□ 0.04
SDCBP-209ENST00000522243 JTBO76095 146 aa15.3■□□□□ 0.04
SDCBP-209ENST00000522243 CDS2O95674 445 aa15.3■□□□□ 0.04
SDCBP-209ENST00000522243 OPRK1P41145 380 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 85.5 ms