RNA–Protein interactions for RNA: ENST00000520417.1

SKP1-207, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-207ENST00000520417 DHFR2Q86XF0 187 aa0.83□□□□□ -2.28
SKP1-207ENST00000520417 CLVS1Q8IUQ0 354 aaPredicted RBP0.83□□□□□ -2.28
SKP1-207ENST00000520417 KRT222Q8N1A0 295 aa0.83□□□□□ -2.28
SKP1-207ENST00000520417 C9orf163Q8N9P6 203 aa0.83□□□□□ -2.28
SKP1-207ENST00000520417 C15orf53Q8NAA6 179 aa0.83□□□□□ -2.28
SKP1-207ENST00000520417 MRPL30Q8TCC3 161 aaKnown RBP0.83□□□□□ -2.28
SKP1-207ENST00000520417 C11orf40Q8WZ69 217 aa0.83□□□□□ -2.28
SKP1-207ENST00000520417 HIST1H2BHQ93079 126 aa0.83□□□□□ -2.28
SKP1-207ENST00000520417 BORCS7Q96B45 105 aa0.83□□□□□ -2.28
SKP1-207ENST00000520417 DGCR14Q96DF8 476 aaKnown RBP0.83□□□□□ -2.28
SKP1-207ENST00000520417 HIST1H2BNQ99877 126 aa0.83□□□□□ -2.28
SKP1-207ENST00000520417 HIST1H2BMQ99879 126 aa0.83□□□□□ -2.28
SKP1-207ENST00000520417 NIPSNAP1Q9BPW8 284 aa0.83□□□□□ -2.28
SKP1-207ENST00000520417 CMSS1Q9BQ75 279 aaKnown RBP0.83□□□□□ -2.28
SKP1-207ENST00000520417 DERL1Q9BUN8 251 aa0.83□□□□□ -2.28
SKP1-207ENST00000520417 TRIM4Q9C037 500 aa0.83□□□□□ -2.28
SKP1-207ENST00000520417 YIPF3Q9GZM5 350 aa0.83□□□□□ -2.28
SKP1-207ENST00000520417 C11orf68Q9H3H3 251 aaKnown RBP0.83□□□□□ -2.28
SKP1-207ENST00000520417 UQCC1Q9NVA1 299 aa0.83□□□□□ -2.28
SKP1-207ENST00000520417 MRPL27Q9P0M9 148 aaKnown RBP0.83□□□□□ -2.28
SKP1-207ENST00000520417 FBXO5Q9UKT4 447 aa0.83□□□□□ -2.28
SKP1-207ENST00000520417 BAIAP2Q9UQB8 552 aa0.83□□□□□ -2.28
SKP1-207ENST00000520417 PRELID3BQ9Y3B1 194 aa0.83□□□□□ -2.28
SKP1-207ENST00000520417 BAZ2BQ9UIF8 2168 aaKnown RBP0.83□□□□□ -2.28
SKP1-207ENST00000520417 MAP3K5Q99683 1374 aa0.83□□□□□ -2.28
SKP1-207ENST00000520417 RP1P56715 2156 aa0.82□□□□□ -2.28
SKP1-207ENST00000520417 TRAV14DV4A0A0A6YYC5 116 aa0.82□□□□□ -2.28
SKP1-207ENST00000520417 PQLC2LA1A4F0 135 aa0.82□□□□□ -2.28
SKP1-207ENST00000520417 DPRXA6NFQ7 191 aa0.82□□□□□ -2.28
SKP1-207ENST00000520417 TMEM212A6NML5 194 aa0.82□□□□□ -2.28
SKP1-207ENST00000520417 PIRO00625 290 aa0.82□□□□□ -2.28
SKP1-207ENST00000520417 CNIH1O95406 144 aa0.82□□□□□ -2.28
SKP1-207ENST00000520417 TCRBP04435 133 aa0.82□□□□□ -2.28
SKP1-207ENST00000520417 LSM6P62312 80 aaKnown RBP0.82□□□□□ -2.28
SKP1-207ENST00000520417 REEP5Q00765 189 aa0.82□□□□□ -2.28
SKP1-207ENST00000520417 RUNX1Q01196 453 aa0.82□□□□□ -2.28
SKP1-207ENST00000520417 EDDM3AQ14507 147 aa0.82□□□□□ -2.28
SKP1-207ENST00000520417 ZNF345Q14585 488 aa0.82□□□□□ -2.28
SKP1-207ENST00000520417 Q8N2B8 174 aa0.82□□□□□ -2.28
SKP1-207ENST00000520417 RASSF5Q8WWW0 418 aa0.82□□□□□ -2.28
SKP1-207ENST00000520417 TOMM6Q96B49 74 aa0.82□□□□□ -2.28
SKP1-207ENST00000520417 SCGB3A1Q96QR1 104 aa0.82□□□□□ -2.28
SKP1-207ENST00000520417 TMEM147Q9BVK8 224 aa0.82□□□□□ -2.28
SKP1-207ENST00000520417 REG4Q9BYZ8 158 aa0.82□□□□□ -2.28
SKP1-207ENST00000520417 RNASE7Q9H1E1 156 aaKnown RBP0.82□□□□□ -2.28
SKP1-207ENST00000520417 DCSTAMPQ9H295 470 aa0.82□□□□□ -2.28
SKP1-207ENST00000520417 SLC39A9Q9NUM3 307 aa0.82□□□□□ -2.28
SKP1-207ENST00000520417 C14orf105Q9NVL8 296 aa0.82□□□□□ -2.28
SKP1-207ENST00000520417 SNURFQ9Y675 71 aa0.82□□□□□ -2.28
SKP1-207ENST00000520417 TMEM56-RWDD3S4R434 201 aa0.82□□□□□ -2.28
SKP1-207ENST00000520417 COL6A6A6NMZ7 2263 aa0.82□□□□□ -2.28
SKP1-207ENST00000520417 TTC21AQ8NDW8 1320 aa0.82□□□□□ -2.28
SKP1-207ENST00000520417 KIF24Q5T7B8 1368 aa0.82□□□□□ -2.28
SKP1-207ENST00000520417 MALRD1Q5VYJ5 2156 aa0.81□□□□□ -2.28
SKP1-207ENST00000520417 SETD5Q9C0A6 1442 aa0.81□□□□□ -2.28
SKP1-207ENST00000520417 hCG_1818297A0A087WSY0 165 aa0.81□□□□□ -2.28
SKP1-207ENST00000520417 A0A0D9SG52 128 aa0.81□□□□□ -2.28
SKP1-207ENST00000520417 FAM236DA0A1B0GTK5 79 aa0.81□□□□□ -2.28
SKP1-207ENST00000520417 EXOC1LA0A1B0GW35 172 aa0.81□□□□□ -2.28
SKP1-207ENST00000520417 A8MT66 165 aa0.81□□□□□ -2.28
SKP1-207ENST00000520417 TMEM114B3SHH9 223 aa0.81□□□□□ -2.28
SKP1-207ENST00000520417 PDE6DO43924 150 aa0.81□□□□□ -2.28
SKP1-207ENST00000520417 IFNA10P01566 189 aa0.81□□□□□ -2.28
SKP1-207ENST00000520417 HTR1AP08908 422 aa0.81□□□□□ -2.28
SKP1-207ENST00000520417 RBP1P09455 135 aa0.81□□□□□ -2.28
SKP1-207ENST00000520417 SMIM17P0DL12 118 aa0.81□□□□□ -2.28
SKP1-207ENST00000520417 FAM236CP0DP71 79 aa0.81□□□□□ -2.28
SKP1-207ENST00000520417 S100A4P26447 101 aaKnown RBP0.81□□□□□ -2.28
SKP1-207ENST00000520417 RANP62826 216 aaKnown RBP0.81□□□□□ -2.28
SKP1-207ENST00000520417 SRSF6Q13247 344 aaKnown RBP0.81□□□□□ -2.28
SKP1-207ENST00000520417 SPANXN3Q5MJ09 141 aa0.81□□□□□ -2.28
SKP1-207ENST00000520417 MED12LQ86YW9 2145 aa0.81□□□□□ -2.28
SKP1-207ENST00000520417 C1orf158Q8N1D5 194 aa0.81□□□□□ -2.28
SKP1-207ENST00000520417 OR4E2Q8NGC2 313 aa0.81□□□□□ -2.28
SKP1-207ENST00000520417 OR5A1Q8NGJ0 315 aa0.81□□□□□ -2.28
SKP1-207ENST00000520417 OR13C4Q8NGS5 318 aa0.81□□□□□ -2.28
SKP1-207ENST00000520417 CT55Q8WUE5 264 aa0.81□□□□□ -2.28
SKP1-207ENST00000520417 H1FXQ92522 213 aaKnown RBP0.81□□□□□ -2.28
SKP1-207ENST00000520417 BTF3L4Q96K17 158 aa0.81□□□□□ -2.28
SKP1-207ENST00000520417 PHB2Q99623 299 aa0.81□□□□□ -2.28
SKP1-207ENST00000520417 SIGMAR1Q99720 223 aa0.81□□□□□ -2.28
SKP1-207ENST00000520417 KIFC1Q9BW19 673 aa0.81□□□□□ -2.28
SKP1-207ENST00000520417 UCK1Q9HA47 277 aa0.81□□□□□ -2.28
SKP1-207ENST00000520417 GLTPQ9NZD2 209 aa0.81□□□□□ -2.28
SKP1-207ENST00000520417 OR5AC2Q9NZP5 309 aa0.81□□□□□ -2.28
SKP1-207ENST00000520417 LHFPL6Q9Y693 200 aa0.81□□□□□ -2.28
SKP1-207ENST00000520417 PTPRSQ13332 1948 aa0.81□□□□□ -2.28
SKP1-207ENST00000520417 GREB1Q4ZG55 1949 aa0.81□□□□□ -2.28
SKP1-207ENST00000520417 DIDO1Q9BTC0 2240 aaKnown RBP0.81□□□□□ -2.28
SKP1-207ENST00000520417 TONSLQ96HA7 1378 aa0.81□□□□□ -2.28
SKP1-207ENST00000520417 NOTCH1P46531 2555 aa0.8□□□□□ -2.28
SKP1-207ENST00000520417 TRAV26-2A0A0B4J265 109 aa0.8□□□□□ -2.28
SKP1-207ENST00000520417 SMIM9A6NGZ8 99 aa0.8□□□□□ -2.28
SKP1-207ENST00000520417 TMEM210A6NLX4 147 aa0.8□□□□□ -2.28
SKP1-207ENST00000520417 OR5F1O95221 314 aa0.8□□□□□ -2.28
SKP1-207ENST00000520417 CASP1P29466 404 aa0.8□□□□□ -2.28
SKP1-207ENST00000520417 DEFA3P59666 94 aa0.8□□□□□ -2.28
SKP1-207ENST00000520417 RHOBP62745 196 aa0.8□□□□□ -2.28
SKP1-207ENST00000520417 HIST1H3AP68431 136 aa0.8□□□□□ -2.28
SKP1-207ENST00000520417 BASP1P80723 227 aaKnown RBP0.8□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms