RNA–Protein interactions for RNA: ENST00000519004.5

PABPC1-208, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2 BASIC

Gene PABPC1, Length 2,401 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-208ENST00000519004 ZNF138P52744 262 aa11.11□□□□□ -0.63
PABPC1-208ENST00000519004 PRR20EP86478 221 aa11.11□□□□□ -0.63
PABPC1-208ENST00000519004 PRR20CP86479 221 aa11.11□□□□□ -0.63
PABPC1-208ENST00000519004 PRR20DP86480 221 aa11.11□□□□□ -0.63
PABPC1-208ENST00000519004 PRR20BP86481 221 aa11.11□□□□□ -0.63
PABPC1-208ENST00000519004 PRR20AP86496 221 aa11.11□□□□□ -0.63
PABPC1-208ENST00000519004 WFDC2Q14508 124 aa11.11□□□□□ -0.63
PABPC1-208ENST00000519004 DHRS13Q6UX07 377 aa11.11□□□□□ -0.63
PABPC1-208ENST00000519004 MRPL16Q9NX20 251 aaKnown RBP11.11□□□□□ -0.63
PABPC1-208ENST00000519004 INSIG2Q9Y5U4 225 aa11.11□□□□□ -0.63
PABPC1-208ENST00000519004 KLRC4-KLRK1H3BQV0 150 aa11.11□□□□□ -0.63
PABPC1-208ENST00000519004 SMAD7O15105 426 aaKnown RBP11.11□□□□□ -0.63
PABPC1-208ENST00000519004 ZNHIT1O43257 154 aa11.11□□□□□ -0.63
PABPC1-208ENST00000519004 LINC00205P59089 165 aa11.11□□□□□ -0.63
PABPC1-208ENST00000519004 HBBP68871 147 aa11.11□□□□□ -0.63
PABPC1-208ENST00000519004 MTURNQ8N3F0 131 aa11.11□□□□□ -0.63
PABPC1-208ENST00000519004 FADS6Q8N9I5 356 aa11.11□□□□□ -0.63
PABPC1-208ENST00000519004 TMEM116Q8NCL8 245 aa11.11□□□□□ -0.63
PABPC1-208ENST00000519004 OR9G4Q8NGQ1 327 aa11.11□□□□□ -0.63
PABPC1-208ENST00000519004 ADTRPQ96IZ2 230 aa11.11□□□□□ -0.63
PABPC1-208ENST00000519004 PRDM14Q9GZV8 571 aa11.11□□□□□ -0.63
PABPC1-208ENST00000519004 TNRC6AQ8NDV7 1962 aaKnown RBP11.11□□□□□ -0.63
PABPC1-208ENST00000519004 ATP5G2Q06055 141 aa11.1□□□□□ -0.63
PABPC1-208ENST00000519004 RTL8BQ17RB0 113 aa11.1□□□□□ -0.63
PABPC1-208ENST00000519004 CR1LQ2VPA4 569 aa11.1□□□□□ -0.63
PABPC1-208ENST00000519004 COLCA1Q6ZS62 124 aa11.1□□□□□ -0.63
PABPC1-208ENST00000519004 PIP4P2Q8N4L2 257 aa11.1□□□□□ -0.63
PABPC1-208ENST00000519004 GCSAMQ8N6F7 178 aa11.1□□□□□ -0.63
PABPC1-208ENST00000519004 TAAR6Q96RI8 345 aa11.1□□□□□ -0.63
PABPC1-208ENST00000519004 HEYLQ9NQ87 328 aaPredicted RBP11.1□□□□□ -0.63
PABPC1-208ENST00000519004 MBNL3Q9NUK0 354 aaKnown RBP11.1□□□□□ -0.63
PABPC1-208ENST00000519004 SS18L2Q9UHA2 77 aa11.1□□□□□ -0.63
PABPC1-208ENST00000519004 USF3Q68DE3 2245 aa11.1□□□□□ -0.63
PABPC1-208ENST00000519004 FER1L5A0AVI2 2057 aa11.1□□□□□ -0.63
PABPC1-208ENST00000519004 OR11H12B2RN74 326 aa11.1□□□□□ -0.63
PABPC1-208ENST00000519004 SIVA1O15304 175 aa11.1□□□□□ -0.63
PABPC1-208ENST00000519004 GFRA3O60609 400 aa11.1□□□□□ -0.63
PABPC1-208ENST00000519004 KLF7O75840 302 aaPredicted RBP11.1□□□□□ -0.63
PABPC1-208ENST00000519004 FKBP2P26885 142 aaKnown RBP11.1□□□□□ -0.63
PABPC1-208ENST00000519004 PRAMEF5Q5TYX0 476 aa11.1□□□□□ -0.63
PABPC1-208ENST00000519004 PRAMEF6Q5VXH4 476 aa11.1□□□□□ -0.63
PABPC1-208ENST00000519004 ABHD12Q8N2K0 398 aa11.1□□□□□ -0.63
PABPC1-208ENST00000519004 OR11H1Q8NG94 326 aa11.1□□□□□ -0.63
PABPC1-208ENST00000519004 OR4X2Q8NGF9 303 aa11.1□□□□□ -0.63
PABPC1-208ENST00000519004 OR11H2Q8NH07 326 aa11.1□□□□□ -0.63
PABPC1-208ENST00000519004 OR10D3Q8NH80 312 aa11.1□□□□□ -0.63
PABPC1-208ENST00000519004 DUSP23Q9BVJ7 150 aa11.1□□□□□ -0.63
PABPC1-208ENST00000519004 C1orf53Q5VUE5 145 aa11.09□□□□□ -0.63
PABPC1-208ENST00000519004 ZNF747Q9BV97 191 aa11.09□□□□□ -0.63
PABPC1-208ENST00000519004 TMUB1Q9BVT8 246 aa11.09□□□□□ -0.63
PABPC1-208ENST00000519004 PLEKHA3Q9HB20 300 aa11.09□□□□□ -0.63
PABPC1-208ENST00000519004 JPT1Q9UK76 154 aa11.09□□□□□ -0.63
PABPC1-208ENST00000519004 PSG8Q9UQ74 426 aa11.09□□□□□ -0.63
PABPC1-208ENST00000519004 UNC13CQ8NB66 2214 aa11.09□□□□□ -0.63
PABPC1-208ENST00000519004 ABCA7Q8IZY2 2146 aa11.09□□□□□ -0.63
PABPC1-208ENST00000519004 LINC00473A8K010 186 aa11.09□□□□□ -0.63
PABPC1-208ENST00000519004 KLK10O43240 276 aa11.09□□□□□ -0.63
PABPC1-208ENST00000519004 TMEM177Q53S58 311 aa11.09□□□□□ -0.63
PABPC1-208ENST00000519004 ZNF418Q8TF45 676 aaPredicted RBP11.09□□□□□ -0.63
PABPC1-208ENST00000519004 PLA2G2FQ9BZM2 168 aa11.09□□□□□ -0.63
PABPC1-208ENST00000519004 CHRNA10Q9GZZ6 450 aa11.09□□□□□ -0.63
PABPC1-208ENST00000519004 C7orf69Q9H7B7 122 aa11.09□□□□□ -0.63
PABPC1-208ENST00000519004 MPC1Q9Y5U8 109 aa11.09□□□□□ -0.63
PABPC1-208ENST00000519004 C2CD4DB7Z1M9 353 aa11.08□□□□□ -0.64
PABPC1-208ENST00000519004 SMIM13P0DJ93 91 aa11.08□□□□□ -0.64
PABPC1-208ENST00000519004 SH2D6Q7Z4S9 175 aa11.08□□□□□ -0.64
PABPC1-208ENST00000519004 WDR31Q8NA23 367 aa11.08□□□□□ -0.64
PABPC1-208ENST00000519004 HSD17B10Q99714 261 aaKnown RBP11.08□□□□□ -0.64
PABPC1-208ENST00000519004 FOXB1Q99853 325 aa11.08□□□□□ -0.64
PABPC1-208ENST00000519004 FGF21Q9NSA1 209 aa11.08□□□□□ -0.64
PABPC1-208ENST00000519004 TIMM8BQ9Y5J9 83 aaPredicted RBP11.08□□□□□ -0.64
PABPC1-208ENST00000519004 TNRC6BQ9UPQ9 1833 aaKnown RBP11.08□□□□□ -0.64
PABPC1-208ENST00000519004 C5orf49A4QMS7 147 aa11.08□□□□□ -0.64
PABPC1-208ENST00000519004 F8W1H4 67 aa11.08□□□□□ -0.64
PABPC1-208ENST00000519004 GTSF1Q8WW33 167 aa11.08□□□□□ -0.64
PABPC1-208ENST00000519004 SIGLEC8Q9NYZ4 499 aa11.08□□□□□ -0.64
PABPC1-208ENST00000519004 KBTBD11-OT1A0A1B0GTJ5 212 aa11.07□□□□□ -0.64
PABPC1-208ENST00000519004 FNDC10F2Z333 226 aa11.07□□□□□ -0.64
PABPC1-208ENST00000519004 MGST3O14880 152 aa11.07□□□□□ -0.64
PABPC1-208ENST00000519004 ANKRD37Q7Z713 158 aa11.07□□□□□ -0.64
PABPC1-208ENST00000519004 NABP2Q9BQ15 211 aa11.07□□□□□ -0.64
PABPC1-208ENST00000519004 SRXN1Q9BYN0 137 aa11.07□□□□□ -0.64
PABPC1-208ENST00000519004 OR2H2O95918 312 aa11.07□□□□□ -0.64
PABPC1-208ENST00000519004 CYC1P08574 325 aa11.07□□□□□ -0.64
PABPC1-208ENST00000519004 ARPC1AQ92747 370 aa11.07□□□□□ -0.64
PABPC1-208ENST00000519004 NDFIP1Q9BT67 221 aa11.07□□□□□ -0.64
PABPC1-208ENST00000519004 SPTY2D1-AS1A0A0U1RR47 76 aa11.06□□□□□ -0.64
PABPC1-208ENST00000519004 A0A1W2PRD5 423 aa11.06□□□□□ -0.64
PABPC1-208ENST00000519004 A0A1W2PRF3 423 aa11.06□□□□□ -0.64
PABPC1-208ENST00000519004 A0A1W2PRM7 423 aa11.06□□□□□ -0.64
PABPC1-208ENST00000519004 PRR33A8MZF0 331 aa11.06□□□□□ -0.64
PABPC1-208ENST00000519004 INSL3P51460 131 aa11.06□□□□□ -0.64
PABPC1-208ENST00000519004 TCTAP57738 103 aa11.06□□□□□ -0.64
PABPC1-208ENST00000519004 PCBD1P61457 104 aa11.06□□□□□ -0.64
PABPC1-208ENST00000519004 ETDBQ3ZM63 59 aa11.06□□□□□ -0.64
PABPC1-208ENST00000519004 TM4SF20Q53R12 229 aa11.06□□□□□ -0.64
PABPC1-208ENST00000519004 INO80CQ6PI98 192 aaPredicted RBP11.06□□□□□ -0.64
PABPC1-208ENST00000519004 PPP1R32Q7Z5V6 425 aa11.06□□□□□ -0.64
PABPC1-208ENST00000519004 RNF183Q96D59 192 aa11.06□□□□□ -0.64
PABPC1-208ENST00000519004 KNL1Q8NG31 2342 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms