RNA–Protein interactions for RNA: ENST00000518885.1

CNOT7-204, Transcript of CCR4-NOT transcription complex subunit 7, human

TSL 3

Gene CNOT7, Length 477 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CNOT7-204	ENST00000518885	HOXA1	P49639	335 aa	Predicted RBP	18.27	■□□□□ 0.52
CNOT7-204	ENST00000518885	PYDC2	Q56P42	97 aa		18.27	■□□□□ 0.52
CNOT7-204	ENST00000518885	RBPMS2	Q6ZRY4	209 aa	Known RBP	18.27	■□□□□ 0.52
CNOT7-204	ENST00000518885	TMEM190	Q8WZ59	177 aa		18.27	■□□□□ 0.52
CNOT7-204	ENST00000518885	C5orf66	Q9H5L9	145 aa		18.27	■□□□□ 0.52
CNOT7-204	ENST00000518885	DAZ1	Q9NQZ3	744 aa	Known RBP	18.27	■□□□□ 0.52
CNOT7-204	ENST00000518885	IGHV3-21	A0A0B4J1V1	117 aa		18.26	■□□□□ 0.51
CNOT7-204	ENST00000518885	TRAV25	A0A0B4J276	109 aa		18.26	■□□□□ 0.51
CNOT7-204	ENST00000518885		A0A0B4J293	547 aa		18.26	■□□□□ 0.51
CNOT7-204	ENST00000518885	CRYM-AS1	A6NIL9	109 aa		18.26	■□□□□ 0.51
CNOT7-204	ENST00000518885	ST8SIA3	O43173	380 aa		18.26	■□□□□ 0.51
CNOT7-204	ENST00000518885	FCGR2B	P31994	310 aa	Predicted RBP	18.26	■□□□□ 0.51
CNOT7-204	ENST00000518885	UNQ9165/PRO28630	Q6UXU0	137 aa		18.26	■□□□□ 0.51
CNOT7-204	ENST00000518885	DEDD2	Q8WXF8	326 aa		18.26	■□□□□ 0.51
CNOT7-204	ENST00000518885	RCHY1	Q96PM5	261 aa		18.26	■□□□□ 0.51
CNOT7-204	ENST00000518885	IGHV3-35	A0A0C4DH35	117 aa		18.25	■□□□□ 0.51
CNOT7-204	ENST00000518885	SCGB2A1	O75556	95 aa		18.25	■□□□□ 0.51
CNOT7-204	ENST00000518885	ANXA3	P12429	323 aa		18.25	■□□□□ 0.51
CNOT7-204	ENST00000518885	TM4SF20	Q53R12	229 aa		18.25	■□□□□ 0.51
CNOT7-204	ENST00000518885	CACNG8	Q8WXS5	425 aa		18.25	■□□□□ 0.51
CNOT7-204	ENST00000518885	CTNNBIP1	Q9NSA3	81 aa	Predicted RBP	18.25	■□□□□ 0.51
CNOT7-204	ENST00000518885	ZNF785	A8K8V0	405 aa		18.24	■□□□□ 0.51
CNOT7-204	ENST00000518885	MT-CO2	P00403	227 aa		18.24	■□□□□ 0.51
CNOT7-204	ENST00000518885	C8orf88	P0DMB2	117 aa		18.24	■□□□□ 0.51
CNOT7-204	ENST00000518885	NPBWR1	P48145	328 aa		18.24	■□□□□ 0.51
CNOT7-204	ENST00000518885	IZUMO4	Q1ZYL8	232 aa		18.24	■□□□□ 0.51
CNOT7-204	ENST00000518885	LAMTOR1	Q6IAA8	161 aa		18.24	■□□□□ 0.51
CNOT7-204	ENST00000518885	TOMM5	Q8N4H5	51 aa		18.24	■□□□□ 0.51
CNOT7-204	ENST00000518885	GLYATL2	Q8WU03	294 aa		18.24	■□□□□ 0.51
CNOT7-204	ENST00000518885	IL22RA2	Q969J5	263 aa		18.24	■□□□□ 0.51
CNOT7-204	ENST00000518885	PINX1	Q96BK5	328 aa	Known RBP	18.24	■□□□□ 0.51
CNOT7-204	ENST00000518885	WDR89	Q96FK6	387 aa	Predicted RBP	18.24	■□□□□ 0.51
CNOT7-204	ENST00000518885	MLX	Q9UH92	298 aa		18.24	■□□□□ 0.51
CNOT7-204	ENST00000518885	TENM3	Q9P273	2699 aa		18.23	■□□□□ 0.51
CNOT7-204	ENST00000518885		I3L2K1	104 aa		18.23	■□□□□ 0.51
CNOT7-204	ENST00000518885		K7EMT4	169 aa		18.23	■□□□□ 0.51
CNOT7-204	ENST00000518885	GNG7	O60262	68 aa		18.23	■□□□□ 0.51
CNOT7-204	ENST00000518885	SPCS3	P61009	180 aa		18.23	■□□□□ 0.51
CNOT7-204	ENST00000518885	SPANXN2	Q5MJ10	180 aa		18.23	■□□□□ 0.51
CNOT7-204	ENST00000518885	TMEM268	Q5VZI3	342 aa		18.23	■□□□□ 0.51
CNOT7-204	ENST00000518885	BTNL8	Q6UX41	500 aa		18.23	■□□□□ 0.51
CNOT7-204	ENST00000518885	DUSP18	Q8NEJ0	188 aa		18.23	■□□□□ 0.51
CNOT7-204	ENST00000518885	OR52E5	Q8NH55	327 aa		18.23	■□□□□ 0.51
CNOT7-204	ENST00000518885	SPATA25	Q9BR10	227 aa		18.23	■□□□□ 0.51
CNOT7-204	ENST00000518885	TM2D3	Q9BRN9	247 aa		18.23	■□□□□ 0.51
CNOT7-204	ENST00000518885	C20orf24	Q9BUV8	137 aa		18.23	■□□□□ 0.51
CNOT7-204	ENST00000518885	C15orf62	A8K5M9	175 aa		18.22	■□□□□ 0.51
CNOT7-204	ENST00000518885	SRPX	P78539	464 aa		18.22	■□□□□ 0.51
CNOT7-204	ENST00000518885	SPINK9	Q5DT21	86 aa		18.22	■□□□□ 0.51
CNOT7-204	ENST00000518885	TMEM61	Q8N0U2	210 aa		18.22	■□□□□ 0.51
CNOT7-204	ENST00000518885	OR52B4	Q8NGK2	314 aa		18.22	■□□□□ 0.51
CNOT7-204	ENST00000518885	GALNT14	Q96FL9	552 aa		18.22	■□□□□ 0.51
CNOT7-204	ENST00000518885	CHRDL1	Q9BU40	450 aa		18.22	■□□□□ 0.51
CNOT7-204	ENST00000518885	CTSG	P08311	255 aa		18.21	■□□□□ 0.51
CNOT7-204	ENST00000518885	EDN2	P20800	178 aa		18.21	■□□□□ 0.51
CNOT7-204	ENST00000518885	ETV6	P41212	452 aa		18.21	■□□□□ 0.51
CNOT7-204	ENST00000518885	SELENOH	Q8IZQ5	122 aa	Known RBP	18.21	■□□□□ 0.51
CNOT7-204	ENST00000518885	RBM38	Q9H0Z9	239 aa	Known RBP	18.21	■□□□□ 0.51
CNOT7-204	ENST00000518885	TMEM56-RWDD3	S4R434	201 aa		18.21	■□□□□ 0.51
CNOT7-204	ENST00000518885	OR11H12	B2RN74	326 aa		18.2	■□□□□ 0.5
CNOT7-204	ENST00000518885		F8W735	103 aa	Predicted RBP	18.2	■□□□□ 0.5
CNOT7-204	ENST00000518885	YIF1A	O95070	293 aa		18.2	■□□□□ 0.5
CNOT7-204	ENST00000518885	BMI1	P35226	326 aa		18.2	■□□□□ 0.5
CNOT7-204	ENST00000518885	AARD	Q4LEZ3	155 aa		18.2	■□□□□ 0.5
CNOT7-204	ENST00000518885	SCAF4	O95104	1147 aa	Known RBP	18.19	■□□□□ 0.5
CNOT7-204	ENST00000518885	AKR1C4	P17516	323 aa		18.19	■□□□□ 0.5
CNOT7-204	ENST00000518885	ADM	P35318	185 aa		18.19	■□□□□ 0.5
CNOT7-204	ENST00000518885	HTR2B	P41595	481 aa		18.19	■□□□□ 0.5
CNOT7-204	ENST00000518885	SPAG8	Q99932	426 aa	Predicted RBP	18.19	■□□□□ 0.5
CNOT7-204	ENST00000518885	GINS3	Q9BRX5	216 aa		18.19	■□□□□ 0.5
CNOT7-204	ENST00000518885	CACNG5	Q9UF02	275 aa		18.19	■□□□□ 0.5
CNOT7-204	ENST00000518885		V9GYH0	126 aa		18.19	■□□□□ 0.5
CNOT7-204	ENST00000518885	CD7	P09564	240 aa		18.18	■□□□□ 0.5
CNOT7-204	ENST00000518885	KLF9	Q13886	244 aa	Predicted RBP	18.18	■□□□□ 0.5
CNOT7-204	ENST00000518885	HAGH	Q16775	308 aa		18.18	■□□□□ 0.5
CNOT7-204	ENST00000518885	NOXA1	Q86UR1	476 aa		18.18	■□□□□ 0.5
CNOT7-204	ENST00000518885	TRIM63	Q969Q1	353 aa		18.18	■□□□□ 0.5
CNOT7-204	ENST00000518885	SLC25A21	Q9BQT8	299 aa	Predicted RBP	18.18	■□□□□ 0.5
CNOT7-204	ENST00000518885	HEYL	Q9NQ87	328 aa	Predicted RBP	18.18	■□□□□ 0.5
CNOT7-204	ENST00000518885		A0A0G2JRQ6	117 aa		18.17	■□□□□ 0.5
CNOT7-204	ENST00000518885	RPS10-NUDT3	A0A1W2PQS6	291 aa		18.17	■□□□□ 0.5
CNOT7-204	ENST00000518885	SULT1A3	P0DMM9	295 aa		18.17	■□□□□ 0.5
CNOT7-204	ENST00000518885	SULT1A4	P0DMN0	295 aa		18.17	■□□□□ 0.5
CNOT7-204	ENST00000518885	INPP1	P49441	399 aa		18.17	■□□□□ 0.5
CNOT7-204	ENST00000518885	CCDC190	Q86UF4	302 aa		18.17	■□□□□ 0.5
CNOT7-204	ENST00000518885	LGI3	Q8N145	548 aa		18.17	■□□□□ 0.5
CNOT7-204	ENST00000518885	LHFPL5	Q8TAF8	219 aa		18.17	■□□□□ 0.5
CNOT7-204	ENST00000518885	SRD5A3	Q9H8P0	318 aa		18.17	■□□□□ 0.5
CNOT7-204	ENST00000518885	STAB2	Q8WWQ8	2551 aa		18.16	■□□□□ 0.5
CNOT7-204	ENST00000518885	CEBPZOS	A8MTT3	80 aa		18.16	■□□□□ 0.5
CNOT7-204	ENST00000518885	C3orf84	H3BNL1	204 aa		18.16	■□□□□ 0.5
CNOT7-204	ENST00000518885	TSPAN4	O14817	238 aa		18.16	■□□□□ 0.5
CNOT7-204	ENST00000518885	RNASE2	P10153	161 aa	Known RBP	18.16	■□□□□ 0.5
CNOT7-204	ENST00000518885	OPRK1	P41145	380 aa		18.16	■□□□□ 0.5
CNOT7-204	ENST00000518885	TMEM187	Q14656	261 aa		18.16	■□□□□ 0.5
CNOT7-204	ENST00000518885	PVRIG	Q6DKI7	326 aa		18.16	■□□□□ 0.5
CNOT7-204	ENST00000518885	DEFB125	Q8N687	156 aa		18.16	■□□□□ 0.5
CNOT7-204	ENST00000518885	GPR146	Q96CH1	333 aa		18.16	■□□□□ 0.5
CNOT7-204	ENST00000518885	HIPK2	Q9H2X6	1198 aa		18.16	■□□□□ 0.5
CNOT7-204	ENST00000518885		A0A0B4J2A0	478 aa		18.15	■□□□□ 0.5

Retrieved 100 of 20,778 RNA–protein pairs in 81.7 ms