RNA–Protein interactions for RNA: ENST00000518538.5

VEGFA-217, Transcript of vascular endothelial growth factor A, humanhuman

TSL 2

Gene VEGFA, Length 535 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-217ENST00000518538 OR4C12Q96R67 309 aa16.81■□□□□ 0.28
VEGFA-217ENST00000518538 ATP6V0BQ99437 205 aa16.81■□□□□ 0.28
VEGFA-217ENST00000518538 C20orf85Q9H1P6 137 aa16.81■□□□□ 0.28
VEGFA-217ENST00000518538 C21orf62Q9NYP8 219 aa16.81■□□□□ 0.28
VEGFA-217ENST00000518538 OR2C1O95371 312 aa16.8■□□□□ 0.28
VEGFA-217ENST00000518538 OR4E1P0C645 316 aa16.8■□□□□ 0.28
VEGFA-217ENST00000518538 GPR183P32249 361 aa16.8■□□□□ 0.28
VEGFA-217ENST00000518538 SUB1P53999 127 aaKnown RBP eCLIP16.8■□□□□ 0.28
VEGFA-217ENST00000518538 LYG2Q86SG7 212 aa16.8■□□□□ 0.28
VEGFA-217ENST00000518538 TBC1D24Q9ULP9 559 aa16.8■□□□□ 0.28
VEGFA-217ENST00000518538 TMED3Q9Y3Q3 217 aa16.8■□□□□ 0.28
VEGFA-217ENST00000518538 IGHV3-21A0A0B4J1V1 117 aa16.79■□□□□ 0.28
VEGFA-217ENST00000518538 CEBPZOSA8MTT3 80 aa16.79■□□□□ 0.28
VEGFA-217ENST00000518538 I3L2K1 104 aa16.79■□□□□ 0.28
VEGFA-217ENST00000518538 TCRBP04435 133 aa16.79■□□□□ 0.28
VEGFA-217ENST00000518538 RNASE2P10153 161 aaKnown RBP16.79■□□□□ 0.28
VEGFA-217ENST00000518538 SLC25A6P12236 298 aa16.79■□□□□ 0.28
VEGFA-217ENST00000518538 DHRS2Q13268 280 aa16.79■□□□□ 0.28
VEGFA-217ENST00000518538 ASAH1Q13510 395 aa16.79■□□□□ 0.28
VEGFA-217ENST00000518538 BSXQ3C1V8 233 aa16.79■□□□□ 0.28
VEGFA-217ENST00000518538 C4orf46Q504U0 113 aa16.79■□□□□ 0.28
VEGFA-217ENST00000518538 PVRIGQ6DKI7 326 aa16.79■□□□□ 0.28
VEGFA-217ENST00000518538 GPHB5Q86YW7 130 aa16.79■□□□□ 0.28
VEGFA-217ENST00000518538 PEMTQ9UBM1 199 aa16.79■□□□□ 0.28
VEGFA-217ENST00000518538 TGOLN2O43493 480 aa16.78■□□□□ 0.28
VEGFA-217ENST00000518538 NXPH3O95157 252 aa16.78■□□□□ 0.28
VEGFA-217ENST00000518538 TNFRSF9Q07011 255 aa16.78■□□□□ 0.28
VEGFA-217ENST00000518538 MZT2BQ6NZ67 158 aa16.78■□□□□ 0.28
VEGFA-217ENST00000518538 IL34Q6ZMJ4 242 aa16.78■□□□□ 0.28
VEGFA-217ENST00000518538 OR1S1Q8NH92 325 aa16.78■□□□□ 0.28
VEGFA-217ENST00000518538 COQ8AQ8NI60 647 aa16.78■□□□□ 0.28
VEGFA-217ENST00000518538 BSCL2Q96G97 398 aaPredicted RBP16.78■□□□□ 0.28
VEGFA-217ENST00000518538 HSPB7Q9UBY9 170 aa16.78■□□□□ 0.28
VEGFA-217ENST00000518538 F8W735 103 aaPredicted RBP16.77■□□□□ 0.28
VEGFA-217ENST00000518538 LGALS9O00182 355 aa16.77■□□□□ 0.28
VEGFA-217ENST00000518538 CORTO00230 105 aa16.77■□□□□ 0.28
VEGFA-217ENST00000518538 PITX3O75364 302 aa16.77■□□□□ 0.28
VEGFA-217ENST00000518538 MT-CO2P00403 227 aa16.77■□□□□ 0.28
VEGFA-217ENST00000518538 HTR2BP41595 481 aa16.77■□□□□ 0.28
VEGFA-217ENST00000518538 PLET1Q6UQ28 207 aa16.77■□□□□ 0.28
VEGFA-217ENST00000518538 PINX1Q96BK5 328 aaKnown RBP16.77■□□□□ 0.28
VEGFA-217ENST00000518538 HEYLQ9NQ87 328 aaPredicted RBP16.77■□□□□ 0.28
VEGFA-217ENST00000518538 ZC4H2Q9NQZ6 224 aa16.77■□□□□ 0.28
VEGFA-217ENST00000518538 NUDT15Q9NV35 164 aa16.77■□□□□ 0.28
VEGFA-217ENST00000518538 GAR1Q9NY12 217 aaKnown RBP16.77■□□□□ 0.28
VEGFA-217ENST00000518538 SIGLEC8Q9NYZ4 499 aa16.77■□□□□ 0.28
VEGFA-217ENST00000518538 OR2T8A6NH00 312 aa16.76■□□□□ 0.27
VEGFA-217ENST00000518538 CSN3P07498 182 aa16.76■□□□□ 0.27
VEGFA-217ENST00000518538 HOXB5P09067 269 aa16.76■□□□□ 0.27
VEGFA-217ENST00000518538 FCGR2BP31994 310 aaPredicted RBP16.76■□□□□ 0.27
VEGFA-217ENST00000518538 FAM106AQ4KMX7 169 aa16.76■□□□□ 0.27
VEGFA-217ENST00000518538 Q56UQ5 140 aa16.76■□□□□ 0.27
VEGFA-217ENST00000518538 SPSB3Q6PJ21 355 aa16.76■□□□□ 0.27
VEGFA-217ENST00000518538 TXN2Q99757 166 aa16.76■□□□□ 0.27
VEGFA-217ENST00000518538 HIPK2Q9H2X6 1198 aa16.76■□□□□ 0.27
VEGFA-217ENST00000518538 TRAV6A0A075B6T7 132 aa16.75■□□□□ 0.27
VEGFA-217ENST00000518538 FAM240BA0A1B0GVZ2 78 aa16.75■□□□□ 0.27
VEGFA-217ENST00000518538 MFAP4P55083 255 aa16.75■□□□□ 0.27
VEGFA-217ENST00000518538 IFITM3Q01628 133 aa16.75■□□□□ 0.27
VEGFA-217ENST00000518538 GGNBP1Q5YKI7 109 aa16.75■□□□□ 0.27
VEGFA-217ENST00000518538 UBAC2Q8NBM4 344 aa16.75■□□□□ 0.27
VEGFA-217ENST00000518538 SLC24A4Q8NFF2 622 aa16.75■□□□□ 0.27
VEGFA-217ENST00000518538 IGLV1-51P01701 117 aa16.74■□□□□ 0.27
VEGFA-217ENST00000518538 C2orf83Q53S99 150 aa16.74■□□□□ 0.27
VEGFA-217ENST00000518538 MRAPQ8TCY5 172 aa16.74■□□□□ 0.27
VEGFA-217ENST00000518538 DTD1Q8TEA8 209 aa16.74■□□□□ 0.27
VEGFA-217ENST00000518538 RBKSQ9H477 322 aa16.74■□□□□ 0.27
VEGFA-217ENST00000518538 ZNF256Q9Y2P7 627 aaPredicted RBP16.74■□□□□ 0.27
VEGFA-217ENST00000518538 WI2-2373I1.2A0A1W2PRP0 233 aa16.73■□□□□ 0.27
VEGFA-217ENST00000518538 FAM90A26D6RGX4 464 aa16.73■□□□□ 0.27
VEGFA-217ENST00000518538 K7EIL1 84 aa16.73■□□□□ 0.27
VEGFA-217ENST00000518538 OR52B4Q8NGK2 314 aa16.73■□□□□ 0.27
VEGFA-217ENST00000518538 MITD1Q8WV92 249 aa16.73■□□□□ 0.27
VEGFA-217ENST00000518538 ZNF436Q9C0F3 470 aaPredicted RBP16.73■□□□□ 0.27
VEGFA-217ENST00000518538 ZNF320A2RRD8 509 aa16.72■□□□□ 0.27
VEGFA-217ENST00000518538 A8MWP6 167 aa16.72■□□□□ 0.27
VEGFA-217ENST00000518538 ADAP1O75689 374 aa16.72■□□□□ 0.27
VEGFA-217ENST00000518538 IGHV3-48P01763 117 aa16.72■□□□□ 0.27
VEGFA-217ENST00000518538 H2AFB2P0C5Z0 115 aa16.72■□□□□ 0.27
VEGFA-217ENST00000518538 ADMP35318 185 aa16.72■□□□□ 0.27
VEGFA-217ENST00000518538 OPRK1P41145 380 aa16.72■□□□□ 0.27
VEGFA-217ENST00000518538 C11orf87Q6NUJ2 197 aa16.72■□□□□ 0.27
VEGFA-217ENST00000518538 DUSP18Q8NEJ0 188 aa16.72■□□□□ 0.27
VEGFA-217ENST00000518538 CHRDL1Q9BU40 450 aa16.72■□□□□ 0.27
VEGFA-217ENST00000518538 IGHV3-35A0A0C4DH35 117 aa16.71■□□□□ 0.27
VEGFA-217ENST00000518538 C2orf70A6NJV1 201 aa16.71■□□□□ 0.27
VEGFA-217ENST00000518538 NUPL2O15504 423 aaKnown RBP16.71■□□□□ 0.27
VEGFA-217ENST00000518538 IFNA21P01568 189 aa16.71■□□□□ 0.27
VEGFA-217ENST00000518538 CTSGP08311 255 aa16.71■□□□□ 0.27
VEGFA-217ENST00000518538 NPY1RP25929 384 aa16.71■□□□□ 0.27
VEGFA-217ENST00000518538 UNQ9165/PRO28630Q6UXU0 137 aa16.71■□□□□ 0.27
VEGFA-217ENST00000518538 NOXA1Q86UR1 476 aa16.71■□□□□ 0.27
VEGFA-217ENST00000518538 HAPLN4Q86UW8 402 aa16.71■□□□□ 0.27
VEGFA-217ENST00000518538 ENKURQ8TC29 256 aa16.71■□□□□ 0.27
VEGFA-217ENST00000518538 RNASEH2CQ8TDP1 164 aaKnown RBP16.71■□□□□ 0.27
VEGFA-217ENST00000518538 FNDC4Q9H6D8 234 aaPredicted RBP16.71■□□□□ 0.27
VEGFA-217ENST00000518538 U3KQ87 197 aa16.71■□□□□ 0.27
VEGFA-217ENST00000518538 GNG7O60262 68 aa16.7■□□□□ 0.26
VEGFA-217ENST00000518538 MED6O75586 246 aa16.7■□□□□ 0.26
VEGFA-217ENST00000518538 SPNP16150 400 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms